Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001220-TA|BGIBMGA001220-PA|IPR004689|UDP-galactose
transporter, IPR007271|Nucleotide-sugar transporter
(365 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g41760.1 68418.m05084 nucleotide-sugar transporter family pro... 133 2e-31
At3g59360.2 68416.m06620 nucleotide-sugar transporter family pro... 93 4e-19
At3g59360.1 68416.m06619 nucleotide-sugar transporter family pro... 93 4e-19
At5g65000.1 68418.m08175 nucleotide-sugar transporter family pro... 86 4e-17
At4g35335.1 68417.m05021 nucleotide-sugar transporter family pro... 74 2e-13
At5g65000.2 68418.m08176 nucleotide-sugar transporter family pro... 66 5e-11
At2g43240.1 68415.m05374 nucleotide-sugar transporter family pro... 50 2e-06
At3g01060.3 68416.m00009 expressed protein 29 3.7
At3g01060.1 68416.m00008 expressed protein 29 3.7
At2g19580.1 68415.m02287 senescence-associated protein-related s... 29 4.9
At1g61890.1 68414.m06982 MATE efflux family protein similar to r... 29 4.9
At5g30520.1 68418.m03755 hypothetical protein 29 6.5
At1g11600.1 68414.m01332 cytochrome P450, putative similar to cy... 29 6.5
At5g62130.1 68418.m07798 Per1-like protein-related 28 8.5
At2g26260.1 68415.m03152 3-beta hydroxysteroid dehydrogenase/iso... 28 8.5
>At5g41760.1 68418.m05084 nucleotide-sugar transporter family
protein low similarity to SP|Q61420 CMP-sialic acid
transporter {Mus musculus}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 340
Score = 133 bits (322), Expect = 2e-31
Identities = 88/311 (28%), Positives = 159/311 (51%), Gaps = 18/311 (5%)
Query: 49 YVSLIVLTVQNAALGLSMRHAKTRDVEEKFSSAAAVVMAEIVKLVICICLVMHESGGVKT 108
Y ++LT+ ++ G+ +++ D K+ A +AE+ KL+I + E ++T
Sbjct: 7 YFVAVLLTILTSSQGILTTLSQS-DGGYKYDYATVPFLAEVFKLIISGLFLWRE---MRT 62
Query: 109 GVQSMYSTVVLNIKDTVRVCVPSFLYILQNNLLYVSAANLDAATYQVTYQLKLLTTAFFA 168
S S + + K +PS +Y++ NN+ + + +D +TYQ+ LK++TT
Sbjct: 63 S-SSTTSRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILF 121
Query: 169 VIVLKRQLKKWQWXXXXXXXXXXXXXQLSSTDAKSSNSGDKLKQSKLIGFSAALAACFIS 228
+ LKR+L K QW Q+ S D L + + G+ + + +S
Sbjct: 122 RLFLKRKLSKLQWMAIGLLAVGTTTSQVKGCGEASC---DSLFTAPIQGYLLGILSAGLS 178
Query: 229 GFAGIYFEKVLKESDISVWMRNVQLSLLSLPFGTGTYLIQEGTLNNMFKG------FDGF 282
AGIY E ++K ++ +++ +N+QL F LI + + KG FDG+
Sbjct: 179 ALAGIYTEFLMKRNNDTLYWQNLQLYTFGSLFNVAR-LIADDFRHGFEKGPWWQRIFDGY 237
Query: 283 ---IWYLVILQAAGGLIVAVVVKYADNILKGFATSVAIIISCVVSMYLFSFVLTVQFAFG 339
W +V+ + GL+V+ ++KYADNI+K ++TS+A++++ V S+YLFSF T+Q G
Sbjct: 238 SITTWLVVLNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLG 297
Query: 340 TAMVIGSIFLY 350
+ I S+ +Y
Sbjct: 298 IVICIMSLHMY 308
>At3g59360.2 68416.m06620 nucleotide-sugar transporter family
protein low similarity to SP|P78382 CMP-sialic acid
transporter {Homo sapiens}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 405
Score = 92.7 bits (220), Expect = 4e-19
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 73 DVEEKFSSAAAVVMAEIVKLVICICLVMHESGGVKTGVQSMYS--TVVLNIKDTVRVCVP 130
D + FS + + EI K++ I +++ ++ K G + + S T V ++ V + VP
Sbjct: 66 DGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLLAVP 125
Query: 131 SFLYILQNNLLYVSAANLDAATYQVTYQLKLLTTAFFAVIVLKRQLKKWQWXXXXXXXXX 190
+ LY + N L + + AT ++ LK+L A +V+KR+ QW
Sbjct: 126 ALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQWEALALLLIG 185
Query: 191 XXXXQLSSTDAKSSNSGDKLKQSKLIGFSAALAACFISGFAGIYFEKVLKES-DISVWMR 249
QL S ++ G L + + + A ++ E LK D S++++
Sbjct: 186 ISVNQLRSLPEGATAIGIPLATGAYV---CTVIFVTVPSMASVFNEYALKSQYDTSIYLQ 242
Query: 250 NVQLSLLSLPFG----TGTYLIQEGTLNNMFKGFDGFIWYLVILQAAGGLIVAVVVKYAD 305
N+ L F GT + + ++ +G +L++ AA G++ + KYAD
Sbjct: 243 NLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYAD 302
Query: 306 NILKGFATSVAIIISCVVSMYLFSFVLTVQFAFGTAMVIGSI 347
ILK ++++VA I + + S LF V+T+ F G ++V S+
Sbjct: 303 TILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISM 344
>At3g59360.1 68416.m06619 nucleotide-sugar transporter family
protein low similarity to SP|P78382 CMP-sialic acid
transporter {Homo sapiens}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 405
Score = 92.7 bits (220), Expect = 4e-19
Identities = 70/282 (24%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 73 DVEEKFSSAAAVVMAEIVKLVICICLVMHESGGVKTGVQSMYS--TVVLNIKDTVRVCVP 130
D + FS + + EI K++ I +++ ++ K G + + S T V ++ V + VP
Sbjct: 66 DGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVSTFVQAARNNVLLAVP 125
Query: 131 SFLYILQNNLLYVSAANLDAATYQVTYQLKLLTTAFFAVIVLKRQLKKWQWXXXXXXXXX 190
+ LY + N L + + AT ++ LK+L A +V+KR+ QW
Sbjct: 126 ALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRRFSIIQWEALALLLIG 185
Query: 191 XXXXQLSSTDAKSSNSGDKLKQSKLIGFSAALAACFISGFAGIYFEKVLKES-DISVWMR 249
QL S ++ G L + + + A ++ E LK D S++++
Sbjct: 186 ISVNQLRSLPEGATAIGIPLATGAYV---CTVIFVTVPSMASVFNEYALKSQYDTSIYLQ 242
Query: 250 NVQLSLLSLPFG----TGTYLIQEGTLNNMFKGFDGFIWYLVILQAAGGLIVAVVVKYAD 305
N+ L F GT + + ++ +G +L++ AA G++ + KYAD
Sbjct: 243 NLFLYGYGAIFNFLGILGTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYAD 302
Query: 306 NILKGFATSVAIIISCVVSMYLFSFVLTVQFAFGTAMVIGSI 347
ILK ++++VA I + + S LF V+T+ F G ++V S+
Sbjct: 303 TILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISM 344
>At5g65000.1 68418.m08175 nucleotide-sugar transporter family
protein low similarity to SP|Q9Y2D2 UDP
N-acetylglucosamine transporter {Homo sapiens}; contains
Pfam profile PF04142: Nucleotide-sugar transporter
Length = 325
Score = 85.8 bits (203), Expect = 4e-17
Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 15/306 (4%)
Query: 53 IVLTVQNAALGLSMRHAKTRDVEEKFSSAAAVVMAEIVKLVICICLVMHESGGVKTGVQS 112
I+LT+Q A L + +DV ++V+ EIVK VIC ++M +G +K G+
Sbjct: 22 ILLTLQYGAQPLISKRCIRKDV----IVTSSVLTCEIVK-VICALILMARNGSLK-GLAK 75
Query: 113 MYSTVVLNIKDTVRVCVPSFLYILQNNLLYVSAANLDAATYQVTYQLKLLTTAFFAVIVL 172
++ + +P+ +Y LQN+LL +S +LD+ T+ + Q K+ TAFF I+L
Sbjct: 76 EWTLM----GSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQTKIFFTAFFTFIIL 131
Query: 173 KRQLKKWQWXXXXXXXXXXXXXQLSSTDAKSSNSGDKLKQSKLIGFSAALAACFISGFAG 232
+++ Q + K S SG Q G LAA +SG A
Sbjct: 132 RQKQSILQIGALCLLIMAAVLLSVGEGSNKDS-SGINADQKLFYGIIPVLAASVLSGLAS 190
Query: 233 IYFEKVLKESDISVWMRNVQLSLL-SLPFGTGTYLIQEGTL---NNMFKGFDGFIWYLVI 288
+ + S ++ V++S++ SL T +G F G+ VI
Sbjct: 191 SLCQWASQVKKHSSYLMTVEMSIVGSLCLLVSTLKSPDGEAIKKYGFFHGWTALTLVPVI 250
Query: 289 LQAAGGLIVAVVVKYADNILKGFATSVAIIISCVVSMYLFSFVLTVQFAFGTAMVIGSIF 348
A GG++V +V +A + KGF A++++ ++ + +V+ SI
Sbjct: 251 SNALGGILVGLVTSHAGGVRKGFVIVSALLVTALLQFAFEGKPPSSYCLVALPLVMSSIS 310
Query: 349 LYGYVP 354
+Y P
Sbjct: 311 MYQKYP 316
>At4g35335.1 68417.m05021 nucleotide-sugar transporter family
protein similar to SP|O77592 UDP N-acetylglucosamine
transporter (Golgi UDP-GlcNAc transporter) {Canis
familiaris}, SP|P78382 CMP-sialic acid transporter {Homo
sapiens}; contains Pfam profile PF04142:
Nucleotide-sugar transporter
Length = 302
Score = 73.7 bits (173), Expect = 2e-13
Identities = 52/174 (29%), Positives = 87/174 (50%), Gaps = 11/174 (6%)
Query: 123 DTVRVC-VPSFLYILQNNLLYVSAANLDAATYQVTYQLKLLTTAFFAVIVLKRQLKKWQW 181
D V+V +P+ LY+ +N L Y A +DA YQ+ L +++T I+LKR+L + QW
Sbjct: 110 DEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILKRKLSEIQW 169
Query: 182 XXXXXXXXXXXXXQLSSTDAKSSNSGDKLKQSKLIGFSAALAACFISGFAGIYFEKVLKE 241
QL+S + D++ Q+ L G++ A+ +SGFAG+Y E ++K+
Sbjct: 170 AGFILLCCGCTTAQLNS-------NSDRVLQTSLPGWTMAIVMALLSGFAGVYTEAIIKK 222
Query: 242 -SDISVWMRNVQLSLLSLPFGTGTYLIQ--EGTLNNMFKGFDGFIWYLVILQAA 292
++ ++N L + + F +IQ + N F FI L+IL A
Sbjct: 223 RPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKGFFHGYSFITLLMILNHA 276
>At5g65000.2 68418.m08176 nucleotide-sugar transporter family
protein low similarity to SP|Q9Y2D2 UDP
N-acetylglucosamine transporter {Homo sapiens}; contains
Pfam profile PF04142: Nucleotide-sugar transporter
Length = 260
Score = 65.7 bits (153), Expect = 5e-11
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 12/231 (5%)
Query: 53 IVLTVQNAALGLSMRHAKTRDVEEKFSSAAAVVMAEIVKLVICICLVMHESGGVKTGVQS 112
I+LT+Q A L + +DV ++V+ EIVK VIC ++M +G +K G+
Sbjct: 22 ILLTLQYGAQPLISKRCIRKDV----IVTSSVLTCEIVK-VICALILMARNGSLK-GLAK 75
Query: 113 MYSTVVLNIKDTVRVCVPSFLYILQNNLLYVSAANLDAATYQVTYQLKLLTTAFFAVIVL 172
++ + +P+ +Y LQN+LL +S +LD+ T+ + Q K+ TAFF I+L
Sbjct: 76 EWTLM----GSLTASGLPAAIYALQNSLLQISYRSLDSLTFSILNQTKIFFTAFFTFIIL 131
Query: 173 KRQLKKWQWXXXXXXXXXXXXXQLSSTDAKSSNSGDKLKQSKLIGFSAALAACFISGFAG 232
+++ Q + K S SG Q G LAA +SG A
Sbjct: 132 RQKQSILQIGALCLLIMAAVLLSVGEGSNKDS-SGINADQKLFYGIIPVLAASVLSGLAS 190
Query: 233 IYFEKVLKESDISVWMRNVQLSLL-SLPFGTGTYLIQEGTLNNMFKGFDGF 282
+ + S ++ V++S++ SL T +G + F G+
Sbjct: 191 SLCQWASQVKKHSSYLMTVEMSIVGSLCLLVSTLKSPDGEAIKKYGFFHGW 241
>At2g43240.1 68415.m05374 nucleotide-sugar transporter family
protein weak similarity to SP|P78382 CMP-sialic acid
transporter {Homo sapiens}; contains Pfam profile
PF04142: Nucleotide-sugar transporter
Length = 787
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/85 (30%), Positives = 48/85 (56%)
Query: 263 GTYLIQEGTLNNMFKGFDGFIWYLVILQAAGGLIVAVVVKYADNILKGFATSVAIIISCV 322
GT + + ++ +G +L++ AA G++ + KYAD ILK ++++VA I + +
Sbjct: 301 GTVIYKGPGSFDILQGHSRATMFLILNNAAQGILSSFFFKYADTILKKYSSTVATIFTGI 360
Query: 323 VSMYLFSFVLTVQFAFGTAMVIGSI 347
S LF +LT+ F G ++V S+
Sbjct: 361 ASAALFGHILTMNFLLGISIVFISM 385
>At3g01060.3 68416.m00009 expressed protein
Length = 372
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 230 FAGIYFEKVLKESDISV-WMRNVQLSLLSLP-FGTGTYL 266
F GI+ K++K+ D+S W ++ +LS P G G Y+
Sbjct: 202 FFGIFRAKIIKDRDLSTPWAEEIEQKVLSSPEVGIGPYV 240
>At3g01060.1 68416.m00008 expressed protein
Length = 455
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 230 FAGIYFEKVLKESDISV-WMRNVQLSLLSLP-FGTGTYL 266
F GI+ K++K+ D+S W ++ +LS P G G Y+
Sbjct: 202 FFGIFRAKIIKDRDLSTPWAEEIEQKVLSSPEVGIGPYV 240
>At2g19580.1 68415.m02287 senescence-associated protein-related
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855; contains a
transmembrane 4 family signature; rare (GC) splice donor
consensus found instead of (GT) at intron 2.
Length = 270
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/48 (31%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 286 LVILQAAGGLIVAVVVKYADNILKGFATSVAIIISCVVSMYLFSFVLT 333
L+++ +A G I A KY + +L + +AI+I ++ + +F+FV+T
Sbjct: 51 LILVVSATGFIGAY--KYKETLLAVYLCCMAILIGLLLVVLIFAFVVT 96
>At1g61890.1 68414.m06982 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family
Length = 501
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 313 TSVAIIISCVVSMYLFSFVLTVQFAFG---TAMVIGSIFLYGYVP 354
++V +I++C+ +LF F + A G + S+F+YG +P
Sbjct: 132 STVVLILTCLPMSFLFLFSNPILTALGEPEQVATLASVFVYGMIP 176
>At5g30520.1 68418.m03755 hypothetical protein
Length = 120
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 222 LAACFISGFAGIYFEKVLKES--DISVWMRNVQLSLLSLPFGTGTYLIQEGTLNNMFKGF 279
+AAC A ++ ++VLKES +++ ++ ++L+ L P ++ EG ++N+ F
Sbjct: 29 IAAC-PEWLAIVFSDEVLKESGNNMAKYIEGLRLAALDGPSVQTLNMLGEGAVHNLHSYF 87
Query: 280 DGFIWYLVILQAAGGLIVAVV 300
+Y+V G I+ VV
Sbjct: 88 AFGNFYVVCGNPEDGKIINVV 108
>At1g11600.1 68414.m01332 cytochrome P450, putative similar to
cytochrome P450 77A2 (CYPLXXVIIA2) (P-450EG5) [Solanum
melongena] and cytochrome P450 77A3 (SP:O48928) [Glycine
max]; is a member of the PF|00067 Cytochrome P450
family. ESTs gb|Z30775 and gb|Z30776 come from this gene
Length = 510
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/76 (22%), Positives = 35/76 (46%)
Query: 57 VQNAALGLSMRHAKTRDVEEKFSSAAAVVMAEIVKLVICICLVMHESGGVKTGVQSMYST 116
+++ A+ M+ KT +VE+ F + I ++IC+C S ++++
Sbjct: 154 IRSWAMQNHMKRIKTENVEKGFVEVMSQCRLTICSILICLCFGAKISEEKIKNIENVLKD 213
Query: 117 VVLNIKDTVRVCVPSF 132
V+L T+ +P F
Sbjct: 214 VMLITSPTLPDFLPVF 229
>At5g62130.1 68418.m07798 Per1-like protein-related
Length = 343
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 38 PNKRVKFGYIKYVSLIVLTVQNAALGLSMRHAKTRDVEEKFSSAAAVVMA 87
PN++ + Y V + + V N+ S+ H++ ++ E+ ++A V+A
Sbjct: 154 PNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSRDVELTERLDYSSATVLA 203
>At2g26260.1 68415.m03152 3-beta hydroxysteroid
dehydrogenase/isomerase family protein contains Pfam
profile PF01073 3-beta hydroxysteroid
dehydrogenase/isomerase domain; similar to
NAD(P)-dependent steroid dehydrogenase from Homo sapiens
[SP|Q15738], Mus musculus [SP|Q9R1J0]
Length = 564
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 302 KYADNILKGFATSVAIIISCVVSMYLFSFVLT---VQFAFGTAMVIGSIFLY--GYVPKK 356
K AD +L I I ++S+Y ++FV T V A A+++ S+FL+ G +P+K
Sbjct: 383 KVADTLLWKDLKQTLIAIFILISIY-YNFVATGSTVVTALSKALLVASVFLFLHGILPEK 441
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.323 0.135 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,550,022
Number of Sequences: 28952
Number of extensions: 281504
Number of successful extensions: 679
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 660
Number of HSP's gapped (non-prelim): 17
length of query: 365
length of database: 12,070,560
effective HSP length: 82
effective length of query: 283
effective length of database: 9,696,496
effective search space: 2744108368
effective search space used: 2744108368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -