GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001219-TA|BGIBMGA001219-
PA|IPR002573|Choline/ethanolamine kinase, IPR011009|Protein
kinase-like
         (343 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   4.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   7.5  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 90  YAVFENGLIYQYFPGDTLNIETVLDIKIW 118
           +  + N     Y+  D L+ +T  DI++W
Sbjct: 106 FKTYSNVTTCSYYSLDDLSEDTFYDIRLW 134


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/31 (25%), Positives = 18/31 (58%)

Query: 88  KLYAVFENGLIYQYFPGDTLNIETVLDIKIW 118
           ++Y+V+E   +  +  G  L +  +LDI ++
Sbjct: 47  EIYSVYERRYMNAHLSGIQLVVRNLLDISLY 77


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.139    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,151
Number of Sequences: 317
Number of extensions: 3554
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 343
length of database: 114,650
effective HSP length: 57
effective length of query: 286
effective length of database: 96,581
effective search space: 27622166
effective search space used: 27622166
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 43 (21.4 bits)