Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001219-TA|BGIBMGA001219-
PA|IPR002573|Choline/ethanolamine kinase, IPR011009|Protein
kinase-like
(343 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0501 - 29836545-29836640,29836752-29836855,29837034-298370... 141 6e-34
05_06_0207 + 26377836-26378201,26379785-26379906,26380025-263802... 128 6e-30
01_01_0589 + 4394154-4394513,4394641-4394762,4394862-4395057,439... 120 1e-27
09_04_0257 + 16170914-16171113,16171362-16171554,16171929-161720... 94 1e-19
09_01_0051 - 862286-864670 30 3.1
02_03_0345 + 17973509-17974131,17974207-17974537,17974624-179749... 29 5.4
09_06_0240 + 21797458-21799369,21799636-21799784 29 7.2
03_06_0039 + 31235840-31236214,31237057-31237674 29 7.2
>01_06_0501 -
29836545-29836640,29836752-29836855,29837034-29837081,
29837188-29837305,29837812-29838007,29838089-29838210,
29839409-29839831
Length = 368
Score = 141 bits (342), Expect = 6e-34
Identities = 78/246 (31%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 75 RNIKTLSARGLAPKLYAVFENGLIYQYFPGDTLNIETVLDIKIWPLVAKQMAKMHRVELG 134
R + +S G P+L F NG + ++ TL+ + D +I LVA ++ + H +++
Sbjct: 111 RTFECMSRHGQGPRLLGRFTNGRVEEFIHARTLSAADLRDPEISALVASKLREFHNLDMP 170
Query: 135 KEVQKDPMVWDKIEQFLSLLPEKFSTEVKHNRFVSSFGSVTKLRIEFERLKSHLIKTESP 194
K ++WD+++ +L S++ + +F GS L E L+
Sbjct: 171 GP--KSVLIWDRLKNWLKTARNLCSSD-ESKKF--RLGS---LENEIAALEKEFSGDYHG 222
Query: 195 IVFAHNDLLLGNVIFNKDEGTISFIDYEYASYNYQAFDIANHFNEFVGLSIEDS----DY 250
I F HNDL GN++ ++D ++ IDYEYAS+N A+DIANHF E + DY
Sbjct: 223 IGFCHNDLQYGNIMIDEDTNMLTIIDYEYASFNPVAYDIANHFCEMAADYHSEKPHRLDY 282
Query: 251 QRYPSKDFQLAWIRVYLSEYLGTMTPDAKSVDTVYEEVQKLSLASHFLWGIWSLVQFEHS 310
+YP D Q +++ YLS + + PDA+ V+ + + ++K +LASH +WG+W ++ +
Sbjct: 283 SKYPDTDEQKRFVKTYLSNSV-SEEPDAEEVENLLQSIEKYTLASHLVWGLWGIISDHVN 341
Query: 311 DIDFDF 316
DIDFD+
Sbjct: 342 DIDFDY 347
>05_06_0207 +
26377836-26378201,26379785-26379906,26380025-26380220,
26380642-26380759,26380869-26380916,26380995-26381095,
26381178-26381285
Length = 352
Score = 128 bits (309), Expect = 6e-30
Identities = 69/246 (28%), Positives = 127/246 (51%), Gaps = 14/246 (5%)
Query: 75 RNIKTLSARGLAPKLYAVFENGLIYQYFPGDTLNIETVLDIKIWPLVAKQMAKMHRVELG 134
R +++S G P+L F NG + ++ TL+ + D +I ++A ++ + H +++
Sbjct: 92 RTFESMSRHGHGPRLLGRFPNGRVEEFIHARTLSAVDLRDPEISAIIASKLREFHNLDMP 151
Query: 135 KEVQKDPMVWDKIEQFLSLLPEKFSTEVKHNRFVSSFGSVTKLRIEFERLKSHLIKTESP 194
K ++WD++ +L ++ + S + E L++ L +
Sbjct: 152 GP--KSVLIWDRLRNWLKTAKNLCPSDEAKEFCLDSMEN------EITALENELSEDYQC 203
Query: 195 IVFAHNDLLLGNVIFNKDEGTISFIDYEYASYNYQAFDIANHFNEFVGLSIEDS----DY 250
+ F HNDL GN++ +++ ++ IDYEYAS+ A+DIANHF E + DY
Sbjct: 204 VGFCHNDLQYGNIMIDEETKLLTIIDYEYASFGPVAYDIANHFCEMAADYHSEKPHILDY 263
Query: 251 QRYPSKDFQLAWIRVYLSEYLGTMTPDAKSVDTVYEEVQKLSLASHFLWGIWSLVQFEHS 310
+YP D Q +++ YLS PDA+ V+ + + ++K +LASH +W +W ++ +
Sbjct: 264 TKYPDTDEQKQFVQSYLSS--SGEEPDAEKVNNLIKSIEKYTLASHLIWALWGIISEHVN 321
Query: 311 DIDFDF 316
DIDFD+
Sbjct: 322 DIDFDY 327
>01_01_0589 +
4394154-4394513,4394641-4394762,4394862-4395057,
4395275-4395392,4395499-4395546,4395691-4395791,
4395893-4396000
Length = 350
Score = 120 bits (290), Expect = 1e-27
Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 15/247 (6%)
Query: 75 RNIKTLSARGLAPKLYAVFENGLIYQYFPGDTLNIETVLDIKIWPLVAKQMAKMHRVELG 134
R + +S G P+L F NG I ++ TL+ + D +I L+AK++ + H +L
Sbjct: 90 RTFECMSRHGQGPRLLGRFPNGRIEEFINARTLSAADLRDAEISSLIAKKLREFH--DLD 147
Query: 135 KEVQKDPMVWDKIEQFLSLLPEKFSTEVKHNRFVSSFGSVTKLRIEFERLKSHLIKTESP 194
K+ +W ++ ++L + S E + +F S+ KL E L L +
Sbjct: 148 MPGPKNVSLWQRLRRWLEEARGRCSPE-EARQF-----SLEKLGDEIAMLDIALSGVDQR 201
Query: 195 IVFAHNDLLLGNVIFNKDEGTISFIDYEYASYNYQAFDIANHFNE----FVGLSIEDSDY 250
+ F HNDL GN++ ++ ++ IDYEYAS+N AFDIANHF E + + D+
Sbjct: 202 VGFCHNDLQYGNIMIYEETRQVTLIDYEYASFNPVAFDIANHFCEMSADYHSATPHVLDF 261
Query: 251 QRYPSKDFQLAWIRVYLSEYLGTMTPDAKSVDTVYEEVQKLSLASHFLWGIWSLVQ-FEH 309
+YP D Q +++ YLS G DA+ V+ + + K SLASH WG+W ++ +
Sbjct: 262 TKYPGIDEQRRFVQTYLSS-SGENPSDAE-VEHLLGLIAKYSLASHIFWGLWGIISGHVN 319
Query: 310 SDIDFDF 316
+IDF++
Sbjct: 320 KNIDFEY 326
>09_04_0257 +
16170914-16171113,16171362-16171554,16171929-16172034,
16172293-16172415,16172739-16172830,16173276-16173376,
16173458-16173524,16174016-16174108,16174247-16174375
Length = 367
Score = 94.3 bits (224), Expect = 1e-19
Identities = 73/254 (28%), Positives = 115/254 (45%), Gaps = 39/254 (15%)
Query: 77 IKTLSARGLAPKLYAVFENGLIYQYFPGDTLNIETVLDIKIWPLVAKQMAKMHRVELGKE 136
I LSA G +L FENG++ + TL + + +I +AK++ + H+V++
Sbjct: 133 IPHLSAAGFGAQLLGTFENGMVQSFIYARTLTPSDMKEPRIAAEIAKEIRRFHQVDI--P 190
Query: 137 VQKDPMVWDKIEQFLSLLP-EKFSTEVKHNRFVSSFGSVTKLRIEFERLKSHLIKTESPI 195
K+P +WD I +F+ +F + K R+ + S K++ E + LK + I E
Sbjct: 191 GSKEPQLWDDIFKFMKKASILEFEDKEKQKRYETI--SFRKIQDEVKELKLYFIDFE--- 245
Query: 196 VFAHNDLLLGNVIFNKDEGTISFIDYEYASYNYQAFDIANHFNEFVGLSIEDSDYQRYPS 255
+ Y Y Y DIANHFNE+ G D DY YP
Sbjct: 246 ----------------------YGSYSYRGY-----DIANHFNEYAGY---DCDYSLYPD 275
Query: 256 KDFQLAWIRVYLSEYLGTMTPDAKSVDTVYEEVQKLSLASHFLWGIWSLVQFEHSDIDFD 315
K+ Q + R YL + + +D +Y E LASH W +W+L+Q + S IDFD
Sbjct: 276 KNSQYHFFRNYLQPDRPSEV-QLQDLDALYVETNTYRLASHIYWALWALIQAKVSPIDFD 334
Query: 316 FGSPLWIELGEAKR 329
+ ++ E K+
Sbjct: 335 YLGYFFLRYDEYKK 348
>09_01_0051 - 862286-864670
Length = 794
Score = 29.9 bits (64), Expect = 3.1
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 82 ARGLAPK--LYAVFENGLIYQYFPGDTLNI-ETVLDIKIWPLVAKQMAKMHRVELGKEVQ 138
A G AP Y V +GL Q GD L + + +LD I P V K++ V L
Sbjct: 200 AAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNV-----KIYTVLLSSLCN 254
Query: 139 KDPMVWDKIEQFLSLLPEK--FSTEVKHNRFVSSFGSVTKLRIEFERL 184
+ D+ Q L + +K EV +N F+S V ++ F+RL
Sbjct: 255 AGKI--DEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRL 300
>02_03_0345 +
17973509-17974131,17974207-17974537,17974624-17974985,
17975314-17975572
Length = 524
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 137 VQKDPMVWDKIEQFLSLLPEKFSTEVKHNRFVSSFG 172
+ +DP VWD+ E F +P++F+ + V FG
Sbjct: 422 IHRDPQVWDEPEAF---IPDRFADGKNEGKMVIPFG 454
>09_06_0240 + 21797458-21799369,21799636-21799784
Length = 686
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 280 SVDTVYEEVQKLSLASHFLWGIWSLVQFEHSDIDFDFGSPLW 321
S D E+ + + LWG ++ +E S ++F G P+W
Sbjct: 563 STDDAAEQASNMRSQINILWG---MLLYERSVVEFKLGLPMW 601
>03_06_0039 + 31235840-31236214,31237057-31237674
Length = 330
Score = 28.7 bits (61), Expect = 7.2
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 137 VQKDPMVWDKIEQFLSLLPEKFSTEVKHNRFVSSFG 172
+Q+DPMVW + +F PE+F F+ FG
Sbjct: 227 IQRDPMVWKEPNEF---KPERFENGESEGLFMIPFG 259
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.139 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,826,900
Number of Sequences: 37544
Number of extensions: 396713
Number of successful extensions: 844
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 826
Number of HSP's gapped (non-prelim): 10
length of query: 343
length of database: 14,793,348
effective HSP length: 83
effective length of query: 260
effective length of database: 11,677,196
effective search space: 3036070960
effective search space used: 3036070960
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
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