GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001218-TA|BGIBMGA001218-PA|IPR001023|Heat shock protein
Hsp70, IPR013126|Heat shock protein 70
         (840 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   127   4e-31
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   126   8e-31
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   119   7e-29

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  127 bits (306), Expect = 4e-31
 Identities = 72/202 (35%), Positives = 109/202 (53%), Gaps = 7/202 (3%)

Query: 174 MNETTATALTYGIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAQ 233
           +NE TA A+ YG+ K+      EK RNV+  D G  +  VS     +G   + ATA D  
Sbjct: 1   INEPTAAAIAYGLDKK-----AEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTH 55

Query: 234 CGGRDIDMALADYFTQDFVTRYKLDARKNQRAYLRLLQEVEKLKKQMSANSTRLPLNIEC 293
            GG D D  L +Y TQDF  ++K D   N RA  RL  + E+ K+ +S ++T+  + I+ 
Sbjct: 56  LGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLS-SATQASIEIDS 114

Query: 294 FMEERDVSGDMQRSQMEQICAETFNRVERTLRAILHNAKLRSEDIHSVEIVGGSTRIPAV 353
             +  D S  + R++ E I  + F +    +  +L +AK+    +H + +VGGSTRIP V
Sbjct: 115 LFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKV 174

Query: 354 KSLIEQAF-GKHASTTLNQDEA 374
           + LI + F GK    ++N DEA
Sbjct: 175 QQLITEYFNGKEPCRSINPDEA 196


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  126 bits (303), Expect = 8e-31
 Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 7/202 (3%)

Query: 174 MNETTATALTYGIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAQ 233
           +NE TA A+ YG+ K+      E+ RNV+  D G  +  VS     +G   + ATA D  
Sbjct: 1   INEPTAAAIAYGLDKK-----AERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTH 55

Query: 234 CGGRDIDMALADYFTQDFVTRYKLDARKNQRAYLRLLQEVEKLKKQMSANSTRLPLNIEC 293
            GG D D  L +Y TQDF  ++K D   N RA  RL  + E+ K+ +S ++T+  + I+ 
Sbjct: 56  LGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLS-SATQASIEIDS 114

Query: 294 FMEERDVSGDMQRSQMEQICAETFNRVERTLRAILHNAKLRSEDIHSVEIVGGSTRIPAV 353
             +  D S  + R++ E I  + F +    +  +L +AK+    +H + +VGGSTRIP V
Sbjct: 115 LFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKV 174

Query: 354 KSLIEQAF-GKHASTTLNQDEA 374
           + LI + F GK    ++N DEA
Sbjct: 175 QQLITEYFNGKEPCRSINPDEA 196


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  119 bits (287), Expect = 7e-29
 Identities = 66/202 (32%), Positives = 114/202 (56%), Gaps = 8/202 (3%)

Query: 174 MNETTATALTYGIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAQ 233
           +NE TA A+ YG+ K+   GAE+   N++  D G  +  VS    + G   ++AT+ D  
Sbjct: 1   INEPTAAAIAYGLDKK---GAEQ---NILVYDLGGGTFDVSILTIDNGVFEVVATSGDTH 54

Query: 234 CGGRDIDMALADYFTQDFVTRYKLDARKNQRAYLRLLQEVEKLKKQMSANSTRLPLNIEC 293
            GG D D  + DYF +    ++K D R +++A  +L +EVEK K+ +S +  +  L IE 
Sbjct: 55  LGGEDFDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLS-SVHKTTLTIEN 113

Query: 294 FMEERDVSGDMQRSQMEQICAETFNRVERTLRAILHNAKLRSEDIHSVEIVGGSTRIPAV 353
            + + D S  + R++ E++  + F +  + ++ +L +A +  + I  + +VGGSTRIP +
Sbjct: 114 LLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKI 173

Query: 354 KSLIEQAF-GKHASTTLNQDEA 374
           + LI+  F GK  +  +N DEA
Sbjct: 174 QQLIKDFFDGKELNRGINPDEA 195


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.130    0.370 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,672
Number of Sequences: 317
Number of extensions: 6705
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 3
length of query: 840
length of database: 114,650
effective HSP length: 63
effective length of query: 777
effective length of database: 94,679
effective search space: 73565583
effective search space used: 73565583
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)