Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001217-TA|BGIBMGA001217-PA|IPR012337|Polynucleotidyl
transferase, Ribonuclease H fold, IPR006941|Ribonuclease CAF1
(205 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1 pro... 258 1e-68
BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription ... 258 1e-68
BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription ... 258 1e-68
AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein. 258 1e-68
BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription ... 257 2e-68
BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein. 257 2e-68
AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens ... 257 2e-68
AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein. 257 2e-68
AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein. 254 1e-67
AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor ... 252 8e-67
BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription ... 225 8e-59
BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein. 225 8e-59
>L46722-1|AAF01500.1| 262|Homo sapiens BTG1 binding factor 1
protein.
Length = 262
Score = 258 bits (632), Expect = 1e-68
Identities = 119/172 (69%), Positives = 144/172 (83%), Gaps = 3/172 (1%)
Query: 18 STADYQYQL-LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNIN 76
ST + ++ L EDMYAQDSI+LL SG+QF++HEE GIE FAELLM+SG+VL + +
Sbjct: 70 STWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVK 129
Query: 77 WLSFHSGYDFGYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEV 136
WLSFHSGYDFGYL+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEV
Sbjct: 130 WLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEV 189
Query: 137 ADQLELRRVGPQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGA 186
A+QLEL R+GPQHQAGSDSLLTGMAFFK++E+FF+ +I+ GHLYGLG+
Sbjct: 190 AEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGS 241
Score = 60.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLR 28
MDTEFPGVVARPIGEFRS ADYQYQLLR
Sbjct: 16 MDTEFPGVVARPIGEFRSNADYQYQLLR 43
>BC070187-1|AAH70187.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 258 bits (632), Expect = 1e-68
Identities = 119/172 (69%), Positives = 144/172 (83%), Gaps = 3/172 (1%)
Query: 18 STADYQYQL-LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNIN 76
ST + ++ L EDMYAQDSI+LL SG+QF++HEE GIE FAELLM+SG+VL + +
Sbjct: 93 STWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVK 152
Query: 77 WLSFHSGYDFGYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEV 136
WLSFHSGYDFGYL+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEV
Sbjct: 153 WLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEV 212
Query: 137 ADQLELRRVGPQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGA 186
A+QLEL R+GPQHQAGSDSLLTGMAFFK++E+FF+ +I+ GHLYGLG+
Sbjct: 213 AEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGS 264
Score = 60.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLR 28
MDTEFPGVVARPIGEFRS ADYQYQLLR
Sbjct: 39 MDTEFPGVVARPIGEFRSNADYQYQLLR 66
>BC060852-1|AAH60852.1| 285|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 285
Score = 258 bits (632), Expect = 1e-68
Identities = 119/172 (69%), Positives = 144/172 (83%), Gaps = 3/172 (1%)
Query: 18 STADYQYQL-LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNIN 76
ST + ++ L EDMYAQDSI+LL SG+QF++HEE GIE FAELLM+SG+VL + +
Sbjct: 93 STWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVK 152
Query: 77 WLSFHSGYDFGYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEV 136
WLSFHSGYDFGYL+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEV
Sbjct: 153 WLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEV 212
Query: 137 ADQLELRRVGPQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGA 186
A+QLEL R+GPQHQAGSDSLLTGMAFFK++E+FF+ +I+ GHLYGLG+
Sbjct: 213 AEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGS 264
Score = 60.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLR 28
MDTEFPGVVARPIGEFRS ADYQYQLLR
Sbjct: 39 MDTEFPGVVARPIGEFRSNADYQYQLLR 66
>AF086915-1|AAP97145.1| 285|Homo sapiens CAF1 protein.
Length = 285
Score = 258 bits (632), Expect = 1e-68
Identities = 119/172 (69%), Positives = 144/172 (83%), Gaps = 3/172 (1%)
Query: 18 STADYQYQL-LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNIN 76
ST + ++ L EDMYAQDSI+LL SG+QF++HEE GIE FAELLM+SG+VL + +
Sbjct: 93 STWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVK 152
Query: 77 WLSFHSGYDFGYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEV 136
WLSFHSGYDFGYL+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEV
Sbjct: 153 WLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEV 212
Query: 137 ADQLELRRVGPQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGA 186
A+QLEL R+GPQHQAGSDSLLTGMAFFK++E+FF+ +I+ GHLYGLG+
Sbjct: 213 AEQLELERIGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGLGS 264
Score = 60.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLR 28
MDTEFPGVVARPIGEFRS ADYQYQLLR
Sbjct: 39 MDTEFPGVVARPIGEFRSNADYQYQLLR 66
>BT006857-1|AAP35503.1| 292|Homo sapiens CCR4-NOT transcription
complex, subunit 8 protein.
Length = 292
Score = 257 bits (630), Expect = 2e-68
Identities = 118/174 (67%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 27 LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNINWLSFHSGYDF 86
L EDMY+QDSIDLL NSGLQF++HEE GI+ L FAELLM+SG+VL DN+ WLSFHSGYDF
Sbjct: 103 LTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDF 162
Query: 87 GYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVG 146
GY++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+R+G
Sbjct: 163 GYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIG 222
Query: 147 PQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGAPFTTNANNFQDN 198
QHQAGSDSLLTGMAFF++KE+FF+ +I+ G LYGLG N D+
Sbjct: 223 RQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDS 276
Score = 59.3 bits (137), Expect = 9e-09
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 9/90 (10%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLREDMYAQDSIDLLQNSGLQF-REHEEH--GIEP 57
MDTEFPGVV RPIGEFRS+ DYQYQLLR ++ D + ++Q GL F E E+ GI
Sbjct: 39 MDTEFPGVVVRPIGEFRSSIDYQYQLLRCNV---DLLKIIQ-LGLTFTNEKGEYPSGINT 94
Query: 58 LEF-AELLMSSGIVLMDNINWLSFHSGYDF 86
+F + ++ + D+I+ L+ +SG F
Sbjct: 95 WQFNFKFNLTEDMYSQDSIDLLA-NSGLQF 123
>BC017366-1|AAH17366.1| 292|Homo sapiens CNOT8 protein protein.
Length = 292
Score = 257 bits (630), Expect = 2e-68
Identities = 118/174 (67%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 27 LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNINWLSFHSGYDF 86
L EDMY+QDSIDLL NSGLQF++HEE GI+ L FAELLM+SG+VL DN+ WLSFHSGYDF
Sbjct: 103 LTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDF 162
Query: 87 GYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVG 146
GY++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+R+G
Sbjct: 163 GYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIG 222
Query: 147 PQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGAPFTTNANNFQDN 198
QHQAGSDSLLTGMAFF++KE+FF+ +I+ G LYGLG N D+
Sbjct: 223 RQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDS 276
Score = 59.3 bits (137), Expect = 9e-09
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 9/90 (10%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLREDMYAQDSIDLLQNSGLQF-REHEEH--GIEP 57
MDTEFPGVV RPIGEFRS+ DYQYQLLR ++ D + ++Q GL F E E+ GI
Sbjct: 39 MDTEFPGVVVRPIGEFRSSIDYQYQLLRCNV---DLLKIIQ-LGLTFTNEKGEYPSGINT 94
Query: 58 LEF-AELLMSSGIVLMDNINWLSFHSGYDF 86
+F + ++ + D+I+ L+ +SG F
Sbjct: 95 WQFNFKFNLTEDMYSQDSIDLLA-NSGLQF 123
>AK025358-1|BAB15119.1| 292|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21705 fis, clone COL09940. ).
Length = 292
Score = 257 bits (630), Expect = 2e-68
Identities = 118/174 (67%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 27 LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNINWLSFHSGYDF 86
L EDMY+QDSIDLL NSGLQF++HEE GI+ L FAELLM+SG+VL DN+ WLSFHSGYDF
Sbjct: 103 LTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVRWLSFHSGYDF 162
Query: 87 GYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVG 146
GY++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+R+G
Sbjct: 163 GYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIG 222
Query: 147 PQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGAPFTTNANNFQDN 198
QHQAGSDSLLTGMAFF++KE+FF+ +I+ G LYGLG N D+
Sbjct: 223 RQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDS 276
Score = 59.3 bits (137), Expect = 9e-09
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 9/90 (10%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLREDMYAQDSIDLLQNSGLQF-REHEEH--GIEP 57
MDTEFPGVV RPIGEFRS+ DYQYQLLR ++ D + ++Q GL F E E+ GI
Sbjct: 39 MDTEFPGVVVRPIGEFRSSIDYQYQLLRCNV---DLLKIIQ-LGLTFTNEKGEYPSGINT 94
Query: 58 LEF-AELLMSSGIVLMDNINWLSFHSGYDF 86
+F + ++ + D+I+ L+ +SG F
Sbjct: 95 WQFNFKFNLTEDMYSQDSIDLLA-NSGLQF 123
>AF180476-1|AAF29830.1| 292|Homo sapiens CALIFp protein.
Length = 292
Score = 257 bits (630), Expect = 2e-68
Identities = 118/174 (67%), Positives = 142/174 (81%), Gaps = 2/174 (1%)
Query: 27 LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNINWLSFHSGYDF 86
L EDMY+QDSIDLL NSGLQF++HEE GI+ L FAELLM+SG+VL DN+ WLSFHSGYDF
Sbjct: 103 LTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDF 162
Query: 87 GYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVG 146
GY++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+R+G
Sbjct: 163 GYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIG 222
Query: 147 PQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGAPFTTNANNFQDN 198
QHQAGSDSLLTGMAFF++KE+FF+ +I+ G LYGLG N D+
Sbjct: 223 RQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDS 276
Score = 59.3 bits (137), Expect = 9e-09
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 9/90 (10%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLREDMYAQDSIDLLQNSGLQF-REHEEH--GIEP 57
MDTEFPGVV RPIGEFRS+ DYQYQLLR ++ D + ++Q GL F E E+ GI
Sbjct: 39 MDTEFPGVVVRPIGEFRSSIDYQYQLLRCNV---DLLKIIQ-LGLTFTNEKGEYPSGINT 94
Query: 58 LEF-AELLMSSGIVLMDNINWLSFHSGYDF 86
+F + ++ + D+I+ L+ +SG F
Sbjct: 95 WQFNFKFNLTEDMYSQDSIDLLA-NSGLQF 123
>AF087844-1|AAP97157.1| 292|Homo sapiens CAF2 protein.
Length = 292
Score = 254 bits (623), Expect = 1e-67
Identities = 117/174 (67%), Positives = 141/174 (81%), Gaps = 2/174 (1%)
Query: 27 LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNINWLSFHSGYDF 86
L DMY+QDSIDLL NSGLQF++HEE GI+ L FAELLM+SG+VL DN+ WLSFHSGYDF
Sbjct: 103 LTVDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDF 162
Query: 87 GYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVG 146
GY++KLLTD LP EE++FF L L+FP++YDVKYLMK CKNLKGGLQEVADQL+L+R+G
Sbjct: 163 GYMVKLLTDSRLPEEEHEFFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIG 222
Query: 147 PQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGAPFTTNANNFQDN 198
QHQAGSDSLLTGMAFF++KE+FF+ +I+ G LYGLG N D+
Sbjct: 223 RQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDS 276
Score = 61.7 bits (143), Expect = 2e-09
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 9/90 (10%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLREDMYAQDSIDLLQNSGLQF-REHEEH--GIEP 57
MDTEFPGVV RPIGEFRS+ DYQYQLLR ++ D + ++Q GL F E E+ GI
Sbjct: 39 MDTEFPGVVVRPIGEFRSSIDYQYQLLRCNV---DLLKIIQ-LGLTFTNEKGEYPSGINT 94
Query: 58 LEF-AELLMSSGIVLMDNINWLSFHSGYDF 86
+F +L ++ + D+I+ L+ +SG F
Sbjct: 95 WQFNCKLYLTVDMYSQDSIDLLA-NSGLQF 123
>AF053318-1|AAD02685.1| 292|Homo sapiens CCR4-associated factor 1
protein.
Length = 292
Score = 252 bits (616), Expect = 8e-67
Identities = 116/174 (66%), Positives = 140/174 (80%), Gaps = 2/174 (1%)
Query: 27 LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNINWLSFHSGYDF 86
L EDMY+QDSIDLL NSGLQF++HEE GI+ L FAELLM+SG+VL DN+ WLSFHSGYDF
Sbjct: 103 LTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDF 162
Query: 87 GYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVG 146
GY++KLLTD LP EE++F L L+ P++YDVKYLMK CKNLKGGLQEVADQL+L+R+G
Sbjct: 163 GYMVKLLTDSRLPEEEHEFLHILNLFSPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIG 222
Query: 147 PQHQAGSDSLLTGMAFFKIKEIFFDGNIESTS--GHLYGLGAPFTTNANNFQDN 198
QHQAGSDSLLTGMAFF++KE+FF+ +I+ G LYGLG N D+
Sbjct: 223 RQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDS 276
Score = 59.3 bits (137), Expect = 9e-09
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 9/90 (10%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLREDMYAQDSIDLLQNSGLQF-REHEEH--GIEP 57
MDTEFPGVV RPIGEFRS+ DYQYQLLR ++ D + ++Q GL F E E+ GI
Sbjct: 39 MDTEFPGVVVRPIGEFRSSIDYQYQLLRCNV---DLLKIIQ-LGLTFTNEKGEYPSGINT 94
Query: 58 LEF-AELLMSSGIVLMDNINWLSFHSGYDF 86
+F + ++ + D+I+ L+ +SG F
Sbjct: 95 WQFNFKFNLTEDMYSQDSIDLLA-NSGLQF 123
>BT006685-1|AAP35331.1| 246|Homo sapiens CCR4-NOT transcription
complex, subunit 7 protein.
Length = 246
Score = 225 bits (550), Expect = 8e-59
Identities = 104/146 (71%), Positives = 122/146 (83%), Gaps = 1/146 (0%)
Query: 18 STADYQYQL-LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNIN 76
ST + ++ L EDMYAQDSI+LL SG+QF++HEE GIE FAELLM SG+VL + +
Sbjct: 93 STWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMISGVVLCEGVK 152
Query: 77 WLSFHSGYDFGYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEV 136
WLSFHSGYDFGYL+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEV
Sbjct: 153 WLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEV 212
Query: 137 ADQLELRRVGPQHQAGSDSLLTGMAF 162
A+QLEL R+GPQHQAGSDSLLTG A+
Sbjct: 213 AEQLELERIGPQHQAGSDSLLTGNAY 238
Score = 60.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLR 28
MDTEFPGVVARPIGEFRS ADYQYQLLR
Sbjct: 39 MDTEFPGVVARPIGEFRSNADYQYQLLR 66
>BC007315-1|AAH07315.1| 246|Homo sapiens CNOT7 protein protein.
Length = 246
Score = 225 bits (550), Expect = 8e-59
Identities = 104/146 (71%), Positives = 122/146 (83%), Gaps = 1/146 (0%)
Query: 18 STADYQYQL-LREDMYAQDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLMDNIN 76
ST + ++ L EDMYAQDSI+LL SG+QF++HEE GIE FAELLM SG+VL + +
Sbjct: 93 STWQFNFKFNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMISGVVLCEGVK 152
Query: 77 WLSFHSGYDFGYLLKLLTDQNLPHEENDFFERLRLYFPTVYDVKYLMKLCKNLKGGLQEV 136
WLSFHSGYDFGYL+K+LT+ NLP EE DFFE LRL+FP +YDVKYLMK CKNLKGGLQEV
Sbjct: 153 WLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFFPVIYDVKYLMKSCKNLKGGLQEV 212
Query: 137 ADQLELRRVGPQHQAGSDSLLTGMAF 162
A+QLEL R+GPQHQAGSDSLLTG A+
Sbjct: 213 AEQLELERIGPQHQAGSDSLLTGNAY 238
Score = 60.9 bits (141), Expect = 3e-09
Identities = 27/28 (96%), Positives = 27/28 (96%)
Query: 1 MDTEFPGVVARPIGEFRSTADYQYQLLR 28
MDTEFPGVVARPIGEFRS ADYQYQLLR
Sbjct: 39 MDTEFPGVVARPIGEFRSNADYQYQLLR 66
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.139 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,700,132
Number of Sequences: 224733
Number of extensions: 1179347
Number of successful extensions: 2120
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2092
Number of HSP's gapped (non-prelim): 24
length of query: 205
length of database: 73,234,838
effective HSP length: 87
effective length of query: 118
effective length of database: 53,683,067
effective search space: 6334601906
effective search space used: 6334601906
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
- SilkBase 1999-2023 -