Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001216-TA|BGIBMGA001216-PA|undefined
(67 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27852| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.1
SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_9406| Best HMM Match : Pneumo_att_G (HMM E-Value=2) 26 3.7
SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_46728| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_48606| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_44047| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_27011| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_25749| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_5564| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_3491| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 4.9
SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 6.5
SB_42638| Best HMM Match : Filament (HMM E-Value=5.5) 25 8.6
SB_58526| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
SB_10141| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.6
>SB_27852| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 27.1 bits (57), Expect = 2.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 3 NVPLVDMFKGCVIAAGAGGADSIFQDAQHETGENSGVGPLPAD 45
N L D+ CV + G+D +F + E E SGV P P D
Sbjct: 12 NRRLYDLLVKCVKSKKKCGSDEVFYPSDEELKE-SGVFPRPRD 53
>SB_8085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 461
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 246 DQVF-DANFE-GYNGHVGPFEARVNMGPV 272
>SB_51105| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 236 DQVF-DANFE-GYNGHVGPFEARVNMGPV 262
>SB_9406| Best HMM Match : Pneumo_att_G (HMM E-Value=2)
Length = 407
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
DS F A TG NS GPL +N+G V
Sbjct: 283 DSFFNPAI--TGYNSAAGPLKETVNIGPV 309
>SB_56215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1505
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 569 DQVF-DANIE-GYNGHVGPFEARVNMGPV 595
>SB_46728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 179 DQVF-DANIE-GYNGHVGPFEARVNMGPV 205
>SB_48606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 258 DQVF-DANIE-GYNGHVGPFEARVNMGPV 284
>SB_44047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 179 DQVF-DANIE-GYNGHVGPFEARVNMGPV 205
>SB_27011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 161 DQVF-DANIE-GYNGHVGPFKARVNMGPV 187
>SB_25749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 203 DQVF-DANIE-GYNGHVGPFEARVNMGPV 229
>SB_5564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 32 DQVF-DANIE-GYNGHVGPFEARVNMGPV 58
>SB_3491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 25.8 bits (54), Expect = 4.9
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 23 DSIFQDAQHETGENSGVGPLPADINMGKV 51
D +F DA E G N VGP A +NMG V
Sbjct: 203 DQVF-DANIE-GYNGHVGPFEARVNMGPV 229
>SB_17959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 843
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 20 GGADSIFQDAQHETGENSGVGPLPADINMGKVNRRKV 56
G DS+F +A+ E E G P + +G +NR V
Sbjct: 314 GPPDSLFTNAETEIVEYEGSPYSPRNFEVGYLNRNDV 350
>SB_42638| Best HMM Match : Filament (HMM E-Value=5.5)
Length = 252
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 SIFQDAQHETGENSGVGPLPADINMGKVNRR 54
+++ H G S + P DIN+ KV R+
Sbjct: 8 NLYASGPHAKGTASRISAKPFDINLRKVERK 38
>SB_58526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 24 SIFQDAQHETGENSGVGPLPADINMGKVNRR 54
+++ H G S + P DIN+ KV R+
Sbjct: 8 NLYASGPHAKGTASRISAKPFDINLRKVERK 38
>SB_10141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 27 QDAQHETGENSGVGPLPADINMGKVNRRKVSTGVQ 61
QD G + LPA++ +G N K++ G+Q
Sbjct: 29 QDETSVNGFRTAWNELPAEVLLGGSNEEKLTYGIQ 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,080,435
Number of Sequences: 59808
Number of extensions: 66912
Number of successful extensions: 124
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 119
Number of HSP's gapped (non-prelim): 16
length of query: 67
length of database: 16,821,457
effective HSP length: 46
effective length of query: 21
effective length of database: 14,070,289
effective search space: 295476069
effective search space used: 295476069
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)
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