GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001216-TA|BGIBMGA001216-PA|undefined
         (67 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    23   1.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    21   3.3  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    20   7.6  

>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 10/35 (28%), Positives = 19/35 (54%)

Query: 29  AQHETGENSGVGPLPADINMGKVNRRKVSTGVQLS 63
           A H TG N+ V P P+ + + +   + ++  V +S
Sbjct: 130 ADHHTGFNAVVRPEPSAVKIAQPVHKVIAQPVHVS 164


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 10/35 (28%), Positives = 16/35 (45%)

Query: 12  GCVIAAGAGGADSIFQDAQHETGENSGVGPLPADI 46
           G  +AAG G A  +   A    G + G G +  ++
Sbjct: 700 GAAVAAGGGVAGMMSTGAGVNRGGDGGCGSIGGEV 734


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 29  AQHETGENSGVGPLPADINMGKVNRRK 55
           A  + G N   GPL +D+ +  V +R+
Sbjct: 510 AMLKKGTNRVTGPLDSDVLIEYVRKRQ 536


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.134    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,478
Number of Sequences: 2123
Number of extensions: 2419
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 67
length of database: 516,269
effective HSP length: 45
effective length of query: 22
effective length of database: 420,734
effective search space:  9256148
effective search space used:  9256148
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.1 bits)
S2: 40 (20.2 bits)