Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001216-TA|BGIBMGA001216-PA|undefined
(67 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF203342-1|AAF13280.1| 1729|Drosophila melanogaster pericardine ... 27 3.2
AE014296-2068|AAF49980.2| 1713|Drosophila melanogaster CG5700-PB... 27 3.2
AY060420-1|AAL25459.1| 243|Drosophila melanogaster LD39082p pro... 27 4.3
AE014134-3004|AAF53729.1| 455|Drosophila melanogaster CG10639-P... 27 4.3
AY147847-1|AAN64333.1| 1282|Drosophila melanogaster cytokine rec... 25 9.8
AY075427-1|AAL68243.1| 1282|Drosophila melanogaster LD46805p pro... 25 9.8
AY069491-1|AAL39636.1| 483|Drosophila melanogaster LD21956p pro... 25 9.8
AJ420377-1|CAD12503.1| 1282|Drosophila melanogaster interleukine... 25 9.8
AF096866-1|AAC72971.1| 487|Drosophila melanogaster bicoid-inter... 25 9.8
AE014298-2912|AAF49002.1| 1282|Drosophila melanogaster CG14226-P... 25 9.8
AE014298-2768|AAF48886.1| 483|Drosophila melanogaster CG7001-PA... 25 9.8
>AF203342-1|AAF13280.1| 1729|Drosophila melanogaster pericardine
protein.
Length = 1729
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 12 GCVIAAGAGGADSIFQDAQHETGE 35
G V+AAG GAD F A+ G+
Sbjct: 1248 GGVVAAGTSGADDAFSQAESSIGD 1271
>AE014296-2068|AAF49980.2| 1713|Drosophila melanogaster CG5700-PB
protein.
Length = 1713
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 12 GCVIAAGAGGADSIFQDAQHETGE 35
G V+AAG GAD F A+ G+
Sbjct: 1232 GGVVAAGTSGADDAFSQAESSIGD 1255
>AY060420-1|AAL25459.1| 243|Drosophila melanogaster LD39082p
protein.
Length = 243
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 29 AQHETGENSGVGPLPADINMGKVNRRKVSTGVQLSFAY 66
A+H++G NSGV G + R G+ L++AY
Sbjct: 80 AKHQSGHNSGVIHAGIYYKPGTLKARLCVEGMHLAYAY 117
>AE014134-3004|AAF53729.1| 455|Drosophila melanogaster CG10639-PA
protein.
Length = 455
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 29 AQHETGENSGVGPLPADINMGKVNRRKVSTGVQLSFAY 66
A+H++G NSGV G + R G+ L++AY
Sbjct: 80 AKHQSGHNSGVIHAGIYYKPGTLKARLCVEGMHLAYAY 117
>AY147847-1|AAN64333.1| 1282|Drosophila melanogaster cytokine receptor
domeless protein.
Length = 1282
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 16 AAGAGGADSIFQDAQHETGENSGVGP 41
+ G G D D HETG S VGP
Sbjct: 993 SGGGGCVDRDGYDDNHETGPISAVGP 1018
>AY075427-1|AAL68243.1| 1282|Drosophila melanogaster LD46805p protein.
Length = 1282
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 16 AAGAGGADSIFQDAQHETGENSGVGP 41
+ G G D D HETG S VGP
Sbjct: 993 SGGGGCVDRDGYDDNHETGPISAVGP 1018
>AY069491-1|AAL39636.1| 483|Drosophila melanogaster LD21956p
protein.
Length = 483
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1 MSNVPLVDMFKGCVIAAGAGGADSIFQDAQHETGENSGV 39
+SN P + GC+ + D + ++ QH T E V
Sbjct: 373 LSNAPSIAQINGCLQDSDGDSEDFLPEEVQHLTHEGRDV 411
>AJ420377-1|CAD12503.1| 1282|Drosophila melanogaster interleukine
JAK/STAT receptor protein.
Length = 1282
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 16 AAGAGGADSIFQDAQHETGENSGVGP 41
+ G G D D HETG S VGP
Sbjct: 993 SGGGGCVDRDGYDDNHETGPISAVGP 1018
>AF096866-1|AAC72971.1| 487|Drosophila melanogaster
bicoid-interacting protein 4 protein.
Length = 487
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1 MSNVPLVDMFKGCVIAAGAGGADSIFQDAQHETGENSGV 39
+SN P + GC+ + D + ++ QH T E V
Sbjct: 377 LSNAPSIAQINGCLQDSDGDSEDFLPEEVQHLTHEGRDV 415
>AE014298-2912|AAF49002.1| 1282|Drosophila melanogaster CG14226-PA
protein.
Length = 1282
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 16 AAGAGGADSIFQDAQHETGENSGVGP 41
+ G G D D HETG S VGP
Sbjct: 993 SGGGGCVDRDGYDDNHETGPISAVGP 1018
>AE014298-2768|AAF48886.1| 483|Drosophila melanogaster CG7001-PA
protein.
Length = 483
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 1 MSNVPLVDMFKGCVIAAGAGGADSIFQDAQHETGENSGV 39
+SN P + GC+ + D + ++ QH T E V
Sbjct: 373 LSNAPSIAQINGCLQDSDGDSEDFLPEEVQHLTHEGRDV 411
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.316 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,359,344
Number of Sequences: 52641
Number of extensions: 119044
Number of successful extensions: 334
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 325
Number of HSP's gapped (non-prelim): 11
length of query: 67
length of database: 24,830,863
effective HSP length: 47
effective length of query: 20
effective length of database: 22,356,736
effective search space: 447134720
effective search space used: 447134720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -