GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001215-TA|BGIBMGA001215-PA|undefined
         (274 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    31   0.012
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   5.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   10.0 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   10.0 
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   10.0 

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 30.7 bits (66), Expect = 0.012
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)

Query: 191 NVMKIGLKDELEQKKKHIS---EENIAVKKDLEESKIKIKDFMNDQAHMRKQNKKTISNT 247
           ++ +I L+ E     K+I+   +  +A    L E +IKI  F N +A  RKQNKK I   
Sbjct: 165 DLQRIELEKEFTFVSKYITIKRKSELAENLGLSERQIKIW-FQNRRAKERKQNKKRIEEK 223

Query: 248 DKI 250
            +I
Sbjct: 224 SQI 226


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 50  AAIAKTILKQENRNKYEQFKKEKEIWTKELEKWKTNQ 86
           ++   TI  QEN   YE    E E     +  W+ N+
Sbjct: 217 SSYTNTIYHQENFENYEPKSPEDEELLDAIFSWQQNE 253


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query: 225  KIKDFMNDQAHMRKQNKKTISNTDKIPT 252
            K +   N++ H    N    +NT+ IPT
Sbjct: 1000 KTETHTNNRTHSATSNSSVNANTNNIPT 1027


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 128 IMVANAMKLKTEELERKTTMIKEIKLLSEIAKKARSPKIIDL 169
           +++ NA+ +K + +      + EIK  + +A+K     I++L
Sbjct: 92  LLIVNAVFVKEKRIRTLLIKLSEIKENTRLAEKQARISILEL 133


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 139 EELERKTTMIKEIKLLSEIAKKARS 163
           E+ E  TT+   ++++ E AKK  S
Sbjct: 435 EDEETSTTVFSNVEVVQEEAKKEES 459


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 10.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 227 KDFMNDQAHMRKQNKKTISNT 247
           K F+N  AH+ +   KTI+ T
Sbjct: 170 KPFVNVNAHVAQFTLKTIAET 190


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 10.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 227 KDFMNDQAHMRKQNKKTISNT 247
           K F+N  AH+ +   KTI+ T
Sbjct: 170 KPFINVNAHVAQFTLKTIAET 190


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 10.0
 Identities = 8/36 (22%), Positives = 21/36 (58%)

Query: 64  KYEQFKKEKEIWTKELEKWKTNQIENNRKLIEKLSV 99
           + ++FK EK+   ++  K  ++ ++N+    +K S+
Sbjct: 232 RQKRFKDEKKELIRQTHKSPSHSVDNSNSSEKKSSI 267


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.126    0.330 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,097
Number of Sequences: 317
Number of extensions: 1538
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 274
length of database: 114,650
effective HSP length: 56
effective length of query: 218
effective length of database: 96,898
effective search space: 21123764
effective search space used: 21123764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 42 (21.0 bits)