Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001214-TA|BGIBMGA001214-PA|IPR003463|Paralytic/GBP/PSP
peptide
(107 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 27 0.63
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 0.83
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 25 1.9
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 2.5
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 25 3.4
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 3.4
SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|... 25 3.4
SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase [UDP-... 24 4.5
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 24 5.9
SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1 |Schizosaccharo... 23 7.8
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 27.1 bits (57), Expect = 0.63
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 12 VLLLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVELATQITL 71
+LLLN SAF A + + +D + +++Y F D++++ ELAT + +
Sbjct: 322 LLLLNMNLTSAFNCL-ANLLDKPFLQAVYTQDTSSLKSFYQTFLDTLKKNEPELATHLLI 380
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 0.83
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 27 SAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVELATQITLASTGKTTT 79
S A+G + I + D E + Y + S+S Q E T T +S+ T T
Sbjct: 737 SGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSSSSATPT 789
>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 468
Score = 25.4 bits (53), Expect = 1.9
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 36 SDRLIFRDDDNEQNYYNVFSD-SVQRGGVELATQITLASTGKTTTEKEGR 84
S R + D+D+E+NY N D ++ + + T AS+ T K+ R
Sbjct: 6 SHRQVVLDEDDEENYNNNLDDEKMEVLLIPQSNSTTFASSDATQMYKKSR 55
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.0 bits (52), Expect = 2.5
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 37 DRLIFRDDDNEQNYYNVFSDSVQRGGVELATQITLASTGKTTTEKEGRDNFKGGCATG 94
D L F D +YNV +++ +E A +I T G+ K G TG
Sbjct: 731 DLLRFNDQKFAPAFYNVLQNTLVAKNLEQANRIAYGKTRWRVVTLSGQLIDKSGTMTG 788
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 24.6 bits (51), Expect = 3.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 24 KSKSAQATGQDVSDRLIFRDD 44
K+K Q T + +SDRL F +D
Sbjct: 335 KNKELQKTNKQLSDRLAFYED 355
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 24.6 bits (51), Expect = 3.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 12 VLLLNSTGASAFKSKSAQATGQD 34
++ LNS G+S F+SKS+ T D
Sbjct: 644 LVALNSEGSSDFESKSSDNTSLD 666
>SPAC3A11.06 |mvp1||sorting nexin Mvp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 664
Score = 24.6 bits (51), Expect = 3.4
Identities = 19/79 (24%), Positives = 30/79 (37%)
Query: 7 IVCCVVLLLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVELA 66
+V C L + ST FK ++ Q + L R DNE + S + L+
Sbjct: 98 LVACYQLGVPSTLEQIFKQRNVLPILQRFNPELFNRSSDNETPLFPNNSPPASTTALNLS 157
Query: 67 TQITLASTGKTTTEKEGRD 85
+ I + E+E D
Sbjct: 158 SNIVPSINESKILEQEDDD 176
>SPAC328.03 |tps1||alpha,alpha-trehalose-phosphate synthase
[UDP-forming]|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 24.2 bits (50), Expect = 4.5
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 40 IFRDDDNEQNYYNVFSDSV 58
+F DD+ +YN FS+S+
Sbjct: 93 VFLDDETADRHYNGFSNSI 111
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 23.8 bits (49), Expect = 5.9
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 3/21 (14%)
Query: 47 EQNYYNVF---SDSVQRGGVE 64
EQ+Y N F SDS +RGG+E
Sbjct: 3822 EQSYLNFFETCSDSNERGGLE 3842
>SPCC965.05c |thp1||uracil DNA N-glycosylase Thp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 325
Score = 23.4 bits (48), Expect = 7.8
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 32 GQDVSDRLIFRDDDNEQNYYNVFSDSVQR 60
G S R D+ +QN +N+F++ V R
Sbjct: 288 GISSSGRAAGYSDEKKQNLWNLFAEEVNR 316
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 462,308
Number of Sequences: 5004
Number of extensions: 16015
Number of successful extensions: 46
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 10
length of query: 107
length of database: 2,362,478
effective HSP length: 64
effective length of query: 43
effective length of database: 2,042,222
effective search space: 87815546
effective search space used: 87815546
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)
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