Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001214-TA|BGIBMGA001214-PA|IPR003463|Paralytic/GBP/PSP
peptide
(107 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g59980.1 68414.m06757 DNAJ heat shock N-terminal domain-conta... 31 0.16
At3g56570.1 68416.m06290 SET domain-containing protein low simil... 27 2.6
At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha catal... 26 4.5
At4g21080.1 68417.m03048 Dof-type zinc finger domain-containing ... 26 4.5
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 26 4.5
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 26 4.5
At2g38470.1 68415.m04725 WRKY family transcription factor contai... 26 4.5
At2g35340.1 68415.m04333 RNA helicase, putative similar to ATP-d... 26 6.0
At1g80390.1 68414.m09411 auxin-responsive AUX/IAA family protein... 26 6.0
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 26 6.0
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 26 6.0
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 26 6.0
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 26 6.0
At5g47780.1 68418.m05902 glycosyl transferase family 8 protein c... 25 7.9
At3g20480.1 68416.m02594 tetraacyldisaccharide 4'-kinase family ... 25 7.9
>At1g59980.1 68414.m06757 DNAJ heat shock N-terminal
domain-containing protein similar to Altered Response to
Gravity [Arabidopsis thaliana] GI:4249662; contains Pfam
profile PF00226 DnaJ domain
Length = 414
Score = 31.1 bits (67), Expect = 0.16
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 27 SAQATGQDVSDRLIFRDDDNEQNYYNV-FSDSVQRGGVELATQITLASTGKTTT 79
S T ++ D LI + + +N + + + D V+ GG+ LA Q TGK +T
Sbjct: 165 SVTLTEEEAQDGLICKVHSSAKNKFKLLYFDQVENGGLSLALQEDSRKTGKLST 218
>At3g56570.1 68416.m06290 SET domain-containing protein low
similarity to SP|Q43088 Ribulose-1,5 bisphosphate
carboxylase/oxygenase large subunit N-
methyltransferase, chloroplast precursor (EC 2.1.1.127)
{Pisum sativum}; contains Pfam profile PF00856: SET
domain
Length = 531
Score = 27.1 bits (57), Expect = 2.6
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 22 AFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVELATQITLASTGKTTTEK 81
AFK + QA G D S+ L DD+N+ F D ++ G V T T KT+ +
Sbjct: 8 AFK-RWMQANGVDCSEALNLVDDENDGVSVRAFCD-LKEGDVVANISKTACLTIKTSGAR 65
Query: 82 E 82
E
Sbjct: 66 E 66
>At5g67100.1 68418.m08460 DNA-directed DNA polymerase alpha catalytic
subunit, putative similar to SP|O48653 DNA polymerase
alpha catalytic subunit (EC 2.7.7.7) {Oryza sativa};
contains Pfam profiles: PF03175 DNA polymerase type B,
organellar and viral, PF00136 DNA polymerase family B,
PF03104 DNA polymerase family B, exonuclease domain
Length = 1492
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 21 SAFKSKSAQATGQDVSDRLIFRDDDNE 47
S ++SKS AT D S L+F D E
Sbjct: 1295 SKYRSKSNDATSSDPSTSLLFATSDEE 1321
>At4g21080.1 68417.m03048 Dof-type zinc finger domain-containing
protein prolamin box binding factor, Zea mays,
PATCHX:G2393775
Length = 249
Score = 26.2 bits (55), Expect = 4.5
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 38 RLIFRDDDNEQNYYNVFSDSV 58
RL F D EQ+YY+V SD++
Sbjct: 155 RLAFHDGSFEQDYYDVGSDNL 175
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 14 LLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQN-YYNVFSDSVQ 59
+ S AS+F S +Q+ + S +L+F+D E+N +VFS +Q
Sbjct: 290 ITGSPVASSFLSSFSQSHESNPSVKLLFQDPATERNSNKSVFSSGLQ 336
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 14 LLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQN-YYNVFSDSVQ 59
+ S AS+F S +Q+ + S +L+F+D E+N +VFS +Q
Sbjct: 377 ITGSPVASSFLSSFSQSHESNPSVKLLFQDPATERNSNKSVFSSGLQ 423
>At2g38470.1 68415.m04725 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain;
Length = 519
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 17 STGASAFKSKSAQATGQDVSDRL-IFRDDDNEQNYYNVFSDS--VQRGGVELATQITLAS 73
S+ A+ S + A +V+++ I D + N +N+F S Q GV T T +
Sbjct: 77 SSSANVLASPTTGALITNVTNQKGINEGDKSNNNNFNLFDFSFHTQSSGVSAPTTTTTTT 136
Query: 74 TGKTTT 79
T TTT
Sbjct: 137 TTTTTT 142
>At2g35340.1 68415.m04333 RNA helicase, putative similar to
ATP-dependent RNA helicase #3 [Homo sapiens] GI:3107913;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1110
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 7/38 (18%)
Query: 24 KSKSAQATGQDVSDRLIFR-------DDDNEQNYYNVF 54
K +SA TG+ + FR DDD+E NY+++F
Sbjct: 126 KKQSASKTGKSDKGQKRFRKKSEQLEDDDDEANYFDIF 163
>At1g80390.1 68414.m09411 auxin-responsive AUX/IAA family protein
similar to SP|Q38825|AXI7_ARATH Auxin-responsive protein
IAA7 (Indoleacetic acid-induced protein 7). [Mouse-ear
cress] {Arabidopsis thaliana}; contains Pfam profile:
PF02309: AUX/IAA family
Length = 179
Score = 25.8 bits (54), Expect = 6.0
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
Query: 48 QNYYNVFSDSVQRGGVELATQITLASTGKTTTEKEGRDNFKGGCATGFKRTAD 100
+ Y V+ DS GG EL TLA G T EG F G F T D
Sbjct: 4 EEYVRVWPDSGDLGGTEL----TLALPGTPTNASEGPKKF--GNKRRFLETVD 50
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 7 IVCCVVLLLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVEL 65
+V C L+S G + S SA D++ L F+D N ++ + G +EL
Sbjct: 465 LVVCSSSGLDSQGYESSTSNSANQQLLDMNLALAFQDQLNNPRIASILKKKAKEGDLEL 523
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 7 IVCCVVLLLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVEL 65
+V C L+S G + S SA D++ L F+D N ++ + G +EL
Sbjct: 465 LVVCSSSGLDSQGYESSTSNSANQQLLDMNLALAFQDQLNNPRIASILKKKAKEGDLEL 523
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 7 IVCCVVLLLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVEL 65
+V C L+S G + S SA D++ L F+D N ++ + G +EL
Sbjct: 465 LVVCSSSGLDSQGYESSTSNSANQQLLDMNLALAFQDQLNNPRIASILKKKAKEGDLEL 523
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 7 IVCCVVLLLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGVEL 65
+V C L+S G + S SA D++ L F+D N ++ + G +EL
Sbjct: 465 LVVCSSSGLDSQGYESSTSNSANQQLLDMNLALAFQDQLNNPRIASILKKKAKEGDLEL 523
>At5g47780.1 68418.m05902 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8; strong similarity to unknown protein
(emb|CAB71043.1)
Length = 616
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 6 FIVCCVV--LLLNSTGASAFKSKSAQATGQDVSDRLIFRDDDNEQNYYNVFSDSVQRGGV 63
F++ VV +LL + A++FK+ ++ + L F D+N N S +V RGG+
Sbjct: 12 FMLLTVVAHILLYTDPAASFKTPFSKRDFLEDVTALTFNSDENRLNLLPRESPAVLRGGL 71
>At3g20480.1 68416.m02594 tetraacyldisaccharide 4'-kinase family
protein contains Pfam PF02606: tetraacyldisaccharide-1-P
4'-kinase
Length = 395
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 9 CCVVLLLNSTGASAFKSKSAQATGQDVSDRLIFRD 43
C VL +++ G++ KS + TG DRL F D
Sbjct: 274 CASVLCVSAIGSADAFVKSIEMTGAHYVDRLDFSD 308
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.134 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,492,505
Number of Sequences: 28952
Number of extensions: 88684
Number of successful extensions: 240
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 230
Number of HSP's gapped (non-prelim): 16
length of query: 107
length of database: 12,070,560
effective HSP length: 71
effective length of query: 36
effective length of database: 10,014,968
effective search space: 360538848
effective search space used: 360538848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)
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