GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001212-TA|BGIBMGA001212-PA|IPR002048|Calcium-binding
EF-hand
         (153 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    53   5e-09
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    25   0.81 
AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 prote...    23   4.3  
AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.    23   4.3  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 52.8 bits (121), Expect = 5e-09
 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 2/100 (2%)

Query: 47  FDLFDTEKTGKIDTKELKVAIRALGFEPXXXXXXXXXXXXXXGDGKVSFDDFMELMSVKM 106
           F ++D E +G++D  +L  A+RAL   P              G+ K+ F++F+ + S   
Sbjct: 17  FSVYDWEGSGQMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKKIKFEEFLPIFSQVK 76

Query: 107 AEKDTR--EEIMKAFKLFDDDETGKISFKNLKRVAKELGE 144
            EK+    E+ ++  KL+D +E G +    L      LGE
Sbjct: 77  KEKEQGCFEDFLECLKLYDKNEDGTMLLAELTHSLTALGE 116


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 0.81
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 100 ELMSVKMAEKDTREEIMKAFKLFDDDETGKISFKNLKRVAKELGEISQMK 149
           EL+        T+E I   FK   DD  GK  F  + +  K +  I+ ++
Sbjct: 40  ELLFGNFGSIGTKEHITVPFKRIYDDNKGKHPFAGMYQFVKPVALITDLE 89


>AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 protein
           protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 41  RDIKEAFDLFDTEKTGKI 58
           R  K+ FDL + +K GK+
Sbjct: 125 RTFKKVFDLMELKKAGKV 142


>AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 41  RDIKEAFDLFDTEKTGKI 58
           R  K+ FDL + +K GK+
Sbjct: 125 RTFKKVFDLMELKKAGKV 142


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.131    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,841
Number of Sequences: 2123
Number of extensions: 3793
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 153
length of database: 516,269
effective HSP length: 59
effective length of query: 94
effective length of database: 391,012
effective search space: 36755128
effective search space used: 36755128
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 44 (21.8 bits)