Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001211-TA|BGIBMGA001211-PA|IPR001092|Basic
helix-loop-helix dimerisation region bHLH, IPR011598|Helix-loop-helix
DNA-binding
(1049 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 122 2e-27
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 55 3e-07
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 55 3e-07
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 55 3e-07
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 55 3e-07
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 55 3e-07
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 55 3e-07
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 55 3e-07
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 55 3e-07
Z70206-4|CAA94125.1| 235|Caenorhabditis elegans Hypothetical pr... 43 0.001
Z74043-6|CAA98543.1| 124|Caenorhabditis elegans Hypothetical pr... 42 0.003
U82967-1|AAB40926.1| 124|Caenorhabditis elegans MAX-like-1 homo... 42 0.003
AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin p... 41 0.005
Z81579-2|CAB61019.1| 927|Caenorhabditis elegans Hypothetical pr... 36 0.11
AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein. 36 0.11
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 36 0.15
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 34 0.46
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 34 0.61
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 34 0.61
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 33 0.80
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 32 1.9
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 32 1.9
Z81586-10|CAB04699.2| 676|Caenorhabditis elegans Hypothetical p... 32 2.5
U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell l... 32 2.5
U27312-2|AAA68246.4| 206|Caenorhabditis elegans Hypothetical pr... 32 2.5
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 32 2.5
AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical ... 32 2.5
Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical pr... 31 3.2
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 31 3.2
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 31 3.2
U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclas... 31 3.2
AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein. 31 3.2
AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cel... 31 3.2
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 31 4.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 4.3
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 31 4.3
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 31 5.7
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 31 5.7
AL033514-31|CAA22091.1| 313|Caenorhabditis elegans Hypothetical... 31 5.7
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 31 5.7
AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein. 31 5.7
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 30 7.5
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 30 7.5
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 30 7.5
Z68338-7|CAA92758.1| 203|Caenorhabditis elegans Hypothetical pr... 30 7.5
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 30 7.5
U78953-1|AAB38323.1| 185|Caenorhabditis elegans basic helix-loo... 30 7.5
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 30 9.9
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 122 bits (293), Expect = 2e-27
Identities = 114/408 (27%), Positives = 184/408 (45%), Gaps = 30/408 (7%)
Query: 276 KEVKRSAHNAIERRYRTSINDRIVELKNMLVGEEAKLNKSAILRKTIEYIKYLRSQNTRL 335
K +R+AHN IE++YR SINDRI +LK +L G+EAKL+KSA LR+ IE+I+ + +N L
Sbjct: 353 KTERRTAHNLIEKKYRCSINDRIQQLKVLLCGDEAKLSKSATLRRAIEHIEEVEHENQVL 412
Query: 336 KQENIALKQVCQKSGV--KEPIFEGGY---TPPHSDVSSPYHSPHSIDSDTPSSPEYKTE 390
K +++ Q + + EPI Y +P S S P + T + + T
Sbjct: 413 KHHVEQMRKTLQNNRLPYPEPIQYTEYSARSPVESSPSPPRNERKRSRMSTTTPMKNGTR 472
Query: 391 DKYSKIVMGMGDHSRLALCAF-MVGLIAXXXXXXXXXXXXXXXXXXXXNARIDQRKILSE 449
D SK+ + LA+ F +GL+A ID
Sbjct: 473 DGSSKVTLFA---MLLAVLIFNPIGLLAGSAIFSKAAAEAPIASPFEHGRVID-----DP 524
Query: 450 DDSSYEGSSWAICVFNTFFIYLVNFVILGGCLVKLLVYGDSVPKSQSKEAGLFYKHKRLA 509
D +S W + N ++++ N +++ +VKLL++GD V S F + A
Sbjct: 525 DGTSTRTLFWEGSIINMSYVWVFNILMIIYVVVKLLIHGDPVQDFMSVSWQTFVTTREKA 584
Query: 510 GNHLKKGDLNNTRLELHRALEACGRSVQAGGPGQAKYTALTAAVLRQLLQRLPFGGFLAR 569
L G+L + + + L RS+ + PG ++ +R LL L G ++AR
Sbjct: 585 RAELNSGNLKDAQRKFCECLATLDRSLPS--PGVDSVFSVGWECVRHLLNWLWIGRYIAR 642
Query: 570 RAGDLWRD-SPTRRATLHWATEVSSVSHQLAQLEILSDHRGRSE-----RLLLALQAINL 623
R + S R+ A + HQL + I + E L ++L A+NL
Sbjct: 643 RRRSTTKPVSVVCRSHAQTAVLYHEI-HQLHLMGITGNFEDTYEPSALTGLFMSLCAVNL 701
Query: 624 AEVAG------NRQLLADTYVTAALVFKDYMPK-IGNWLCGYYLRACR 664
AE AG R ++A Y++A++ + +P + + GY+LR R
Sbjct: 702 AEAAGASNDGLPRAVMAQIYISASIQCRLALPNLLAPFFSGYFLRRAR 749
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 238 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 297
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 298 MKTQQQQKSLESTAHK 313
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 101 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 160
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 161 MKTQQQQKSLESTAHK 176
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 238 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 297
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 298 MKTQQQQKSLESTAHK 313
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 213 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 272
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 273 MKTQQQQKSLESTAHK 288
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 204 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 263
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 264 MKTQQQQKSLESTAHK 279
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 179 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 238
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 239 MKTQQQQKSLESTAHK 254
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 264 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 323
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 324 MKTQQQQKSLESTAHK 339
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 54.8 bits (126), Expect = 3e-07
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 279 KRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEYIKYL---RSQN 332
K+ HN IERR R +INDRI EL ML E+ KLNK IL+ + +YI+ L R Q
Sbjct: 239 KKDIHNMIERRRRYNINDRIKELGQMLPKNTSEDMKLNKGTILKASCDYIRVLQKDREQA 298
Query: 333 TRLKQENIALKQVCQK 348
+ +Q+ +L+ K
Sbjct: 299 MKTQQQQKSLESTAHK 314
>Z70206-4|CAA94125.1| 235|Caenorhabditis elegans Hypothetical
protein F46G10.6 protein.
Length = 235
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/88 (26%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 267 APNIGPPKVKEVKRSAHNAIERRYRTSINDRIVELKNML-VGEEAKLNKSAILRKTIEYI 325
+P P + + +R+ HN +ERR R I D LK+ + + + K +++ IL++ +E+I
Sbjct: 36 SPKSASPSMDDDRRAHHNELERRRRDHIKDHFTILKDAIPLLDGEKSSRALILKRAVEFI 95
Query: 326 KYLRSQNTRLKQENIALKQVCQKSGVKE 353
++ T+L + A++ + +K+ + E
Sbjct: 96 HVMQ---TKLSSQGKAIEDLTRKNELLE 120
>Z74043-6|CAA98543.1| 124|Caenorhabditis elegans Hypothetical
protein T19B10.11 protein.
Length = 124
Score = 41.5 bits (93), Expect = 0.003
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 271 GPPKVKEVKRSAHNAIERRYRTSINDRIVELKNMLV---GEEAKLNKSAILRKTIEYIKY 327
GP K R HNA+ERR R +I D L+ ++ GE + +++ IL+K IE I+
Sbjct: 22 GPFDPKRHAREQHNALERRRRDNIKDMYTSLREVVPDANGERVQASRAVILKKAIESIEK 81
Query: 328 LRSQNTRL 335
+S + L
Sbjct: 82 GQSDSATL 89
>U82967-1|AAB40926.1| 124|Caenorhabditis elegans MAX-like-1 homolog
protein.
Length = 124
Score = 41.5 bits (93), Expect = 0.003
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 271 GPPKVKEVKRSAHNAIERRYRTSINDRIVELKNMLV---GEEAKLNKSAILRKTIEYIKY 327
GP K R HNA+ERR R +I D L+ ++ GE + +++ IL+K IE I+
Sbjct: 22 GPFDPKRHAREQHNALERRRRDNIKDMYTSLREVVPDANGERVQASRAVILKKAIESIEK 81
Query: 328 LRSQNTRL 335
+S + L
Sbjct: 82 GQSDSATL 89
>AC084158-30|AAK68574.1| 184|Caenorhabditis elegans Neurogenin
protein 1 protein.
Length = 184
Score = 40.7 bits (91), Expect = 0.005
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 274 KVKEVKRSAHNAIERRYRTSINDRIVELKNML--VGEEAKLNKSAILRKTIEYIKYLRSQ 331
+ K V+R NA ERR S+ND + L+ +L + +E K+ K LRK EYI L Q
Sbjct: 58 RAKTVRRDKANARERRRMNSLNDALEHLRGILPALPDEPKMTKIETLRKAQEYIASLSFQ 117
>Z81579-2|CAB61019.1| 927|Caenorhabditis elegans Hypothetical
protein R13H4.4 protein.
Length = 927
Score = 36.3 bits (80), Expect = 0.11
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 151 VDNVPQVNKTSPLKQ-QSQPLLIQNNPKGVPFILKSSDSNFSPVLLQSNIINPKTQTLMY 209
++ V + +T PLK Q+ L+ V L++ S + ++ +P+ L++
Sbjct: 29 INEVTNITETFPLKPGQTTEGLVATLDAAVANFLQTGSFAISKCPIANS--DPRAIDLLH 86
Query: 210 TSTPLQVSSTNQNIITNAK---AGSETTPIHTFFTNSNGTTLLTGIPAVVLEGDKIALNP 266
+ V T Q +I + S +T TNS G LLT + ++ D I +
Sbjct: 87 EALGA-VQDTGQVMIQTGRDFVRDSTSTNKRAIATNS-GRNLLTAVAKFLILADSIDVKV 144
Query: 267 APNIGPPKVKEVKRSAHNAIERRYRTSINDRIVELKNMLVGEEAKLNKSAILRKTIEYIK 326
+ KV EV+ +AH IE + ++D L N+L+ + +L+ + R+ I+ +K
Sbjct: 145 IVD----KVDEVRETAHQMIEADTKIKVDD----LYNLLISQIEELD-ITVRRRAIDLVK 195
Query: 327 YLRSQNTRLKQENIALKQ 344
+Q L AL+Q
Sbjct: 196 --PNQRDDLLAARSALRQ 211
>AF016852-1|AAB94551.1| 927|Caenorhabditis elegans HMP-1 protein.
Length = 927
Score = 36.3 bits (80), Expect = 0.11
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 19/198 (9%)
Query: 151 VDNVPQVNKTSPLKQ-QSQPLLIQNNPKGVPFILKSSDSNFSPVLLQSNIINPKTQTLMY 209
++ V + +T PLK Q+ L+ V L++ S + ++ +P+ L++
Sbjct: 29 INEVTNITETFPLKPGQTTEGLVATLDAAVANFLQTGSFAISKCPIANS--DPRAIDLLH 86
Query: 210 TSTPLQVSSTNQNIITNAK---AGSETTPIHTFFTNSNGTTLLTGIPAVVLEGDKIALNP 266
+ V T Q +I + S +T TNS G LLT + ++ D I +
Sbjct: 87 EALGA-VQDTGQVMIQTGRDFVRDSTSTNKRAIATNS-GRNLLTAVAKFLILADSIDVKV 144
Query: 267 APNIGPPKVKEVKRSAHNAIERRYRTSINDRIVELKNMLVGEEAKLNKSAILRKTIEYIK 326
+ KV EV+ +AH IE + ++D L N+L+ + +L+ + R+ I+ +K
Sbjct: 145 IVD----KVDEVRETAHQMIEADTKIKVDD----LYNLLISQIEELD-ITVRRRAIDLVK 195
Query: 327 YLRSQNTRLKQENIALKQ 344
+Q L AL+Q
Sbjct: 196 --PNQRDDLLAARSALRQ 211
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 35.9 bits (79), Expect = 0.15
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 16/163 (9%)
Query: 182 ILKSSDSNFSPVLLQSNI-INPKTQTLMYTST-PLQVSSTNQNIITNAKAG--SETTPIH 237
+++S + +++ + + + +M + T L V+ + N +TNA+ S +
Sbjct: 1 MVRSDSAEEDQIIIDDGFDLTEEDEEMMSSGTGALPVTIADWNSVTNARMAPPSIMSAAS 60
Query: 238 TFFTNSNG--TTLLTGIPAVVLEGDKIALN-----PAP----NIGPPKVKEVKRSAHNAI 286
F ++G +L + +P + + N PAP ++ P + ++R N
Sbjct: 61 AFDLTASGMQNSLRSVLPTSTIGHAPMLANRSLSQPAPLSPTSLDPDRRSRMRRQIANCN 120
Query: 287 ERRYRTSINDRIVELKNMLVGEEA-KLNKSAILRKTIEYIKYL 328
ERR SIN + L+ +L +E KL+K+AIL++T + + L
Sbjct: 121 ERRRMQSINAGFLALRALLPRKEGEKLSKAAILQQTADMVHQL 163
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 34.3 bits (75), Expect = 0.46
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 33 LLDIDTKCKPEISSSPQV--SPNYNHTGNPVMSQHTHRIRPTPPISKTIQGGYIKEEKFN 90
LLD + K +SS P V SP + PV+++ T +PP ++ ++ E+
Sbjct: 86 LLDFSSSDKSSLSSRPNVKDSPEEDEDAVPVVNRTTTSPPTSPPSQTAVEQDSLQAEEML 145
Query: 91 LPTSLENASVTFPEVIPQQRT 111
+ SL++A P P QR+
Sbjct: 146 VDMSLDDAPAAPPRK-PHQRS 165
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 33.9 bits (74), Expect = 0.61
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 182 ILKSSDSNFSPVLLQSNI-INPKTQTLMYTST-PLQVSSTNQNIITNAKAG--SETTPIH 237
+++S + +++ + + + +M + T L V+ + N +TNA+ S +
Sbjct: 1 MVRSDSAEEDQIIIDDGFDLTEEDEEMMSSGTGALPVTIADWNSVTNARMAPPSIMSAAS 60
Query: 238 TFFTNSNG--TTLLTGIPAVVLEGDKIALN-----PAPNIGPPKV---KEVKRSAHNAIE 287
F ++G +L + +P + + N PAP + P + + ++R N E
Sbjct: 61 AFDLTASGMQNSLRSVLPTSTIGHAPMLANRSLSQPAP-LSPTSLDPDRRMRRQIANCNE 119
Query: 288 RRYRTSINDRIVELKNMLVGEEA-KLNKSAILRKTIEYIKYL 328
RR SIN + L+ +L +E KL+K+AIL++T + + L
Sbjct: 120 RRRMQSINAGFLALRALLPRKEGEKLSKAAILQQTADMVHQL 161
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 33.9 bits (74), Expect = 0.61
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 16/162 (9%)
Query: 182 ILKSSDSNFSPVLLQSNI-INPKTQTLMYTST-PLQVSSTNQNIITNAKAG--SETTPIH 237
+++S + +++ + + + +M + T L V+ + N +TNA+ S +
Sbjct: 1 MVRSDSAEEDQIIIDDGFDLTEEDEEMMSSGTGALPVTIADWNSVTNARMAPPSIMSAAS 60
Query: 238 TFFTNSNG--TTLLTGIPAVVLEGDKIALN-----PAPNIGPPKV---KEVKRSAHNAIE 287
F ++G +L + +P + + N PAP + P + + ++R N E
Sbjct: 61 AFDLTASGMQNSLRSVLPTSTIGHAPMLANRSLSQPAP-LSPTSLDPDRRMRRQIANCNE 119
Query: 288 RRYRTSINDRIVELKNMLVGEEA-KLNKSAILRKTIEYIKYL 328
RR SIN + L+ +L +E KL+K+AIL++T + + L
Sbjct: 120 RRRMQSINAGFLALRALLPRKEGEKLSKAAILQQTADMVHQL 161
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 33.5 bits (73), Expect = 0.80
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 33 LLDIDTKCKPEISSSPQVSPNYNHTGNPVMSQHTHRIRPTPPISKTIQGGYIKEEKFNLP 92
LLD + K +SS P SP + PV+++ T +PP ++ ++ E+ +
Sbjct: 86 LLDFSSSDKSSLSSRPD-SPEEDEDAVPVVNRTTTSPPTSPPSQTAVEQDSLQAEEMLVD 144
Query: 93 TSLENASVTFPEVIPQQRT 111
SL++A P P QR+
Sbjct: 145 MSLDDAPAAPPRK-PHQRS 162
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.3 bits (70), Expect = 1.9
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 69 IRPTPPISKTIQGGYIKEEKFNLPTSLENASVTFPEVIPQQRTQVQN--QPMIFQQVVQS 126
++ TPP + + + ++ A + P Q+ + QP+ Q VVQ+
Sbjct: 187 VQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVVQA 246
Query: 127 PVFVNLGPAGNIQPMPDKRSNVIQVDNVPQVNKTSPLKQQSQPLLIQNNPKGVP 180
P + A +Q P + Q V Q +P+ QQ+ + Q PK VP
Sbjct: 247 PPKPIVQQAPVVQQAPPPKQQQAQAQPVQQPPNPAPVVQQASAPVQQAPPKPVP 300
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 32.3 bits (70), Expect = 1.9
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 95 LENASVTFPEVIPQQRTQVQNQPMIFQQVVQSPVFVNLGPAGNIQPMPDKRSNVIQVDNV 154
+E VT E I + T+V+ + ++F Q + VF A +P +K + V +
Sbjct: 5376 VEQKDVTCEEEIKELLTEVEVE-LLFSQ---AEVFSGSTAAPAQEPTVEKLAPV-ESKET 5430
Query: 155 PQVNKTSPLKQQSQPLLIQNNPKGVPFI--LKSSDSNFSPVLLQSNIINPKTQTLMYTST 212
+V ++Q+ P+ + P P + LKS +S + + Q+ II K + TS
Sbjct: 5431 SEVEPAEIVEQKDVPVPETSAPTVEPTVEKLKSVESKETSEVQQAEIIEQKDVPVPETSA 5490
Query: 213 PLQVSSTNQNIITNAKAGSETTP 235
P + ++ +K SE P
Sbjct: 5491 PTVEPTVEKHAPVESKETSEVQP 5513
>Z81586-10|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 267 APNIGPPKVK-EVKRSAHNAIERRYRTSINDRIVELKNMLVGEEAKLNKSAILRKTIEYI 325
APN P + + E+KR ERR+R +R+ E++ E K + R+ E
Sbjct: 401 APNYFPHRTRDEIKREVQMEYERRWRIEEEERLEEIRRKKEEERKKKEEEDEKRRKAEES 460
Query: 326 KYLRSQNTRLKQENIALKQVCQK 348
+ +R K++ + +++ K
Sbjct: 461 ERVRKLKEEEKRKRVLEEEMEMK 483
>U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell
lineage protein 32 protein.
Length = 142
Score = 31.9 bits (69), Expect = 2.5
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 273 PKVKEVKRSAHNAIERRYRTSINDRIVELKNML--VGEEAKLNKSAILRKTIEYIKYLRS 330
P++ ++RSA N ERR ++N EL+ +L + KL+K L+ +YI+ L S
Sbjct: 67 PQLLRMRRSAANERERRRMNTLNVAYDELREVLPEIDSGKKLSKFETLQMAQKYIECL-S 125
Query: 331 QNTRLKQENIALK 343
Q + +N LK
Sbjct: 126 QILKQDSKNENLK 138
>U27312-2|AAA68246.4| 206|Caenorhabditis elegans Hypothetical
protein F26A1.4 protein.
Length = 206
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 296 DRIVELKNMLVGEEAKLNKSAILRKTIEYIKYLRSQNTRLKQENIALKQVCQKSGVKE-P 354
+ ++LK +GE+ + K ++ K EYI+ L + ++ +AL + C + +KE
Sbjct: 110 ENCIKLKQAHIGEKLCIKKP-LMTKAAEYIESLNYHSIPDYEKLLALIEECNPADLKESE 168
Query: 355 IFEGGYTPPHSDVS 368
+E Y PH+ ++
Sbjct: 169 PYEWQYRQPHNPMT 182
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 308 EEAKLNKSAILRKTIEYIKYLRSQNTRLKQ-ENIALKQVCQKSGVK-EPIFEGGYTPPHS 365
EE K NKS ++ E + R++ E A K+ + +G +P Y+PP S
Sbjct: 114 EEYKKNKSEYYKRRNEVKTEEARERRRVRDSETDAWKKAIRDAGQSPDPKRAPRYSPPPS 173
Query: 366 DVSSPYHSPHSIDSDTPS----SPEYKTED 391
+P P S S TP+ SP ++T +
Sbjct: 174 STPTPTPPPSSSSSPTPTPLRRSPRFQTSN 203
>AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical
protein Y41G9A.6 protein.
Length = 524
Score = 31.9 bits (69), Expect = 2.5
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 24/183 (13%)
Query: 67 HRIRPTPPISKTIQGGYIKEEKFNLPTSLENASVTFPEVIPQQRTQV-----QNQPMIFQ 121
HR++PT P++ T ++ PT L AS +FP P + QN P IF
Sbjct: 254 HRLQPTTPLTSTETSSPFFLDQSVRPTQLAVAS-SFPAQTPLHNEPLPPPVTQNSPSIFS 312
Query: 122 QVVQ---SPVFVN-----------LGP-AGNIQPMPDKRSNVIQVDNVPQ-VNKTSPLKQ 165
++ P +N + P +G Q M +S ++ P +N+ + +
Sbjct: 313 NIMHRFSKPTILNGFKALKNACFSVPPFSGLAQQMTSHQSTSLEQTEKPSFLNQNAQVPG 372
Query: 166 QSQPLLIQNNPKGVPFILKSSDSNFSPVLLQSNIINPKTQTLMYTSTPLQVSSTNQNIIT 225
+ N+P + S +S L ++N TQ + ST Q S+ N N
Sbjct: 373 SAVGSSFLNSPVQTQNL--SQNSYGKGFLAGITVVNSLTQHQRFASTLPQTSAKNNNNTW 430
Query: 226 NAK 228
NA+
Sbjct: 431 NAQ 433
>Z75952-3|CAB00096.1| 286|Caenorhabditis elegans Hypothetical
protein F55H12.6b protein.
Length = 286
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 11/106 (10%)
Query: 19 EQELTFVDNTNETGLLDIDTKCKPEISSSPQVSPNY-------NHTGNPVMSQHTHRIRP 71
+QE +D NE L D D + SS Q+ N+ + N V+ + HRI P
Sbjct: 64 KQETLSIDTNNEINLRDDDDFMMMKEFSSNQILVNFLSQLDLPTNDVNRVLGKR-HRISP 122
Query: 72 TPPISKTIQGGYIKE---EKFNLPTSLENASVTFPEVIPQQRTQVQ 114
TP I+ ++ E + FN +L+N + I Q+ + Q
Sbjct: 123 TPTINSSVTPNEEHEPDLKMFNSGDTLQNFLIDIDNHIRQKNQESQ 168
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 216 VSSTNQNIITNAKAGSETTPIHTFFTNSNGTTLLTGIPAVVLEGDKIALNPAP 268
++ST Q++ TN+ + T P + S+G+T+ G G +A AP
Sbjct: 589 LTSTQQSVSTNSPGSTVTRPSTVSGSTSSGSTVTVGSTEASTSGSSLATTSAP 641
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 31.5 bits (68), Expect = 3.2
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 216 VSSTNQNIITNAKAGSETTPIHTFFTNSNGTTLLTGIPAVVLEGDKIALNPAP 268
++ST Q++ TN+ + T P + S+G+T+ G G +A AP
Sbjct: 796 LTSTQQSVSTNSPGSTVTRPSTVSGSTSSGSTVTVGSTEASTSGSSLATTSAP 848
>U49947-2|AAA93421.2| 1032|Caenorhabditis elegans Guanylyl cyclase
protein 11 protein.
Length = 1032
Score = 31.5 bits (68), Expect = 3.2
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 135 AGNIQPMPDKRSNVIQVDNVPQVNKTSPLKQQSQPLLIQNNPKGVPFILKSS---DSNF- 190
A NI + D+ N ++ + + +++++ LL+Q PK V LK+ D+ F
Sbjct: 760 ADNIMNLLDRYRNNLEDVIKERTEQLEDERKRNESLLLQLLPKSVANSLKNGQPVDAEFY 819
Query: 191 -SPVLLQSNIINPKTQTLMYTSTPLQVSSTNQNIITNAKAGSETTPIHTFFTNSNGTTLL 249
S + S+I+ L STPLQV + N+ TN + + T + +
Sbjct: 820 DSVSIYFSDIVG--FTALSSKSTPLQVVNMLNNLYTNFDTIIDKFDCYKVETIGDAYMFV 877
Query: 250 TGIPAV 255
+G+P V
Sbjct: 878 SGLPEV 883
>AF020555-1|AAB68848.1| 173|Caenorhabditis elegans lin-22 protein.
Length = 173
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 271 GPPKVKEVKRSAHNAIERRYRTSINDRIVELKNMLVGEE-------AKLNKSAILRKTIE 323
G + K++K +E++ R IN + +LK +L+ +E +K K+ IL +E
Sbjct: 16 GISRCKKIKNKP--LMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAVE 73
Query: 324 YIKYLRS 330
Y++ LRS
Sbjct: 74 YLQQLRS 80
>AC024817-57|AAK68522.1| 173|Caenorhabditis elegans Abnormal cell
lineage protein 22 protein.
Length = 173
Score = 31.5 bits (68), Expect = 3.2
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 271 GPPKVKEVKRSAHNAIERRYRTSINDRIVELKNMLVGEE-------AKLNKSAILRKTIE 323
G + K++K +E++ R IN + +LK +L+ +E +K K+ IL +E
Sbjct: 16 GISRCKKIKNKP--LMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAVE 73
Query: 324 YIKYLRS 330
Y++ LRS
Sbjct: 74 YLQQLRS 80
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 31.1 bits (67), Expect = 4.3
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 172 IQNNPKGVPFILKSSDSNFSPVLLQSNIINPKTQTLMYTSTPLQVSSTNQNIITNAKAGS 231
I +P P + + + + + + T+ + T+TP S+T+ T +
Sbjct: 24 IATSPTADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTT 83
Query: 232 ETTPIHTFFTNSNGTT 247
TTP T T S TT
Sbjct: 84 TTTPTTTTSTTSTTTT 99
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 4.3
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 216 VSSTNQNIITNAKAGSETTPIHTFFTNSNGTTLLTGIPAVVLEGDKIA-LNPAPN 269
++ST Q++ TN+ + T P + S+G+T+ G G +A +PAP+
Sbjct: 796 LTSTQQSVSTNSPGSTVTRPSTVSGSTSSGSTVTVGSTEASTSGSSVASSSPAPS 850
Score = 30.3 bits (65), Expect = 7.5
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 8/120 (6%)
Query: 137 NIQPMPDKRSNV--IQVDNVPQVNKTS-PLKQQSQPLLIQNNPKGV--PFILKSSDSNFS 191
+I P P + S + Q P V+ TS + Q + + V P S S
Sbjct: 1120 SISPSPSQSSTIGSSQGSTSPVVSTTSGDMTSQGSTQIPGSTGSTVTQPSTGSGSTSTSG 1179
Query: 192 PVLLQSNIINPKTQTLMYTSTPLQVSSTNQNIITNAKAGSETTPIHTFFTNSNGTTLLTG 251
+ Q + P++ +++P +ST Q++ TN+ + T P + S+G+T+ TG
Sbjct: 1180 EITSQGSTQTPRSSL---STSPAISTSTQQSVSTNSPGSTVTQPSTVRGSTSSGSTVTTG 1236
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 31.1 bits (67), Expect = 4.3
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 290 YRTSINDRIVELKNMLVGEEAKLNKSAILRKTIEYIKYLRSQNTRLKQENIALKQ-VCQK 348
YR+ + +R E +++L E+ K+ +K I+Y+ ++ TR K N A +Q + QK
Sbjct: 155 YRSMLQER--EDQSILCTGESGAGKTENTKKVIQYLAHVAGA-TRNKSLNAAAQQNIVQK 211
Query: 349 SGVKEPIFE 357
V+ PI E
Sbjct: 212 PDVRNPIGE 220
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 663 CRSASAESCGGWSACSVRVRWAAS---ARGQHFLRTQRWSYDSDHPPAKLFSRLPDPA 717
C+ S CGG + + WA S R Q +T +W + P K+ P P+
Sbjct: 91 CQLRSCARCGGRAQSKNKAIWACSLCQKRQQILAKTGKWFQPEEQPQPKISGSEPSPS 148
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 663 CRSASAESCGGWSACSVRVRWAAS---ARGQHFLRTQRWSYDSDHPPAKLFSRLPDPA 717
C+ S CGG + + WA S R Q +T +W + P K+ P P+
Sbjct: 91 CQLRSCARCGGRAQSKNKAIWACSLCQKRQQILAKTGKWFQPEEQPQPKISGSEPSPS 148
>AL033514-31|CAA22091.1| 313|Caenorhabditis elegans Hypothetical
protein Y75B8A.31 protein.
Length = 313
Score = 30.7 bits (66), Expect = 5.7
Identities = 15/58 (25%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 165 QQSQPLLIQNNPK---GVPFILKSSDSNFSPVLLQSNIINPKTQTLMYTSTPLQVSST 219
Q ++ L+I +N + +P+I ++ ++ + V++ +N+ K Q L Y+ TP++ + T
Sbjct: 101 QWARRLIINDNLECGTQIPYIERAIENGWGVVVMNTNLNESKDQDLKYSRTPVEHAET 158
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 663 CRSASAESCGGWSACSVRVRWAAS---ARGQHFLRTQRWSYDSDHPPAKLFSRLPDPA 717
C+ S CGG + + WA S R Q +T +W + P K+ P P+
Sbjct: 91 CQLRSCARCGGRAQSKNKAIWACSLCQKRQQILAKTGKWFQPEEQPQPKISGSEPSPS 148
>AB162903-1|BAD32699.1| 159|Caenorhabditis elegans Rim protein.
Length = 159
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 663 CRSASAESCGGWSACSVRVRWAAS---ARGQHFLRTQRWSYDSDHPPAKLFSRLPDPA 717
C+ S CGG + + WA S R Q +T +W + P K+ P P+
Sbjct: 91 CQLRSCARCGGRAQSKNKAIWACSLCQKRQQILAKTGKWFQPEEQPQPKISGSEPSPS 148
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 30.3 bits (65), Expect = 7.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 300 ELKNMLVGEEAKLNKSAILRKTIEYIKYLRSQNTRLKQENIALKQVCQKSGVKEPIFEGG 359
E ++ + E AK+N ++LR + I++ R +N R + E +LK++ QK KE
Sbjct: 896 EQRDHIGDENAKVN--SMLRIAKQQIEHTREENQRQEAEIQSLKELVQKLRNKENEITRT 953
Query: 360 YTPPHSDVSSPYHSPHSI 377
YT + S H +
Sbjct: 954 YTKVKKNYSIQTKQYHEV 971
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 30.3 bits (65), Expect = 7.5
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 300 ELKNMLVGEEAKLNKSAILRKTIEYIKYLRSQNTRLKQENIALKQVCQKSGVKEPIFEGG 359
E ++ + E AK+N ++LR + I++ R +N R + E +LK++ QK KE
Sbjct: 896 EQRDHIGDENAKVN--SMLRIAKQQIEHTREENQRQEAEIQSLKELVQKLRNKENEITRT 953
Query: 360 YTPPHSDVSSPYHSPHSI 377
YT + S H +
Sbjct: 954 YTKVKKNYSIQTKQYHEV 971
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 30.3 bits (65), Expect = 7.5
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 182 ILKSSDSNFSPVLLQSNIINPKTQTLMYTSTPLQVSSTNQNIITNAKAGSETTP----IH 237
I+ DS+F+ L + +P TQ + +T +Q S+T + A + TTP
Sbjct: 469 IIVGKDSSFARARLFTTK-HPSTQKIDVPTTTVQTSTTVPTTPSKTTATTTTTPKPTTTE 527
Query: 238 TFFTNSNGTTLLTGIPAVV 256
T T+S+ TT+ T P V
Sbjct: 528 TATTSSSTTTVTTQKPTTV 546
>Z68338-7|CAA92758.1| 203|Caenorhabditis elegans Hypothetical
protein T24B8.6 protein.
Length = 203
Score = 30.3 bits (65), Expect = 7.5
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 9/145 (6%)
Query: 268 PNIGPPKVKEVKRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEY 324
P+ V + + N ER+ +N V L+ + G +AKL+K LR+ Y
Sbjct: 49 PSSSKSSVTKQTKQKRNERERKRVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARY 108
Query: 325 IKYLRSQ----NTRLKQENIALKQVCQKSGV-KEPIFEGGYTPPHSDVSSPYH-SPHSID 378
I+ L+ Q +T A ++S V + + P +SPY+ P +
Sbjct: 109 IQELQKQLGMSSTSFHNSMPADFPTPEQSPVYPQSVCSMMAQTPSPSYTSPYYPPPQMMS 168
Query: 379 SDTPSSPEYKTEDKYSKIVMGMGDH 403
S+ + ++ S GDH
Sbjct: 169 SNQHDMSSHYYQESSSSSASTSGDH 193
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical
protein C08B11.3 protein.
Length = 1244
Score = 30.3 bits (65), Expect = 7.5
Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 147 NVIQVDNVPQVNKTSPLKQQSQPLLIQNNPKGVPFILKSSDSN---FSPVLLQSNIINPK 203
+ +Q ++ KT P++ +LI++ + VP K +D N V L S I+ P+
Sbjct: 735 HAVQESGAERIIKTEPIRTDEPSVLIESQEQSVP--KKQNDINGEETDEVELNSKIVTPE 792
Query: 204 TQ-----TLMYTSTPLQVSSTNQNIITNAKAGSETT-PIHTFFTNSNGTTLL 249
+ T+ P+Q S N GSE + I F N L
Sbjct: 793 KKSITNGTVEVCQEPIQASKLFDENYANQIEGSEVSIEIREQFVNDTDNVKL 844
>U78953-1|AAB38323.1| 185|Caenorhabditis elegans basic
helix-loop-helix DNA bindingprotein HLH-3 protein.
Length = 185
Score = 30.3 bits (65), Expect = 7.5
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 9/145 (6%)
Query: 268 PNIGPPKVKEVKRSAHNAIERRYRTSINDRIVELKNML---VGEEAKLNKSAILRKTIEY 324
P+ V + + N ER+ +N V L+ + G +AKL+K LR+ Y
Sbjct: 16 PSSSKSSVTKQTKQKRNERERKRVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARY 75
Query: 325 IKYLRSQ----NTRLKQENIALKQVCQKSGV-KEPIFEGGYTPPHSDVSSPYH-SPHSID 378
I+ L+ Q +T A ++S V + + P +SPY+ P +
Sbjct: 76 IQELQKQLGMSSTSFHNSMPADFPTPEQSPVYPQSVCSMMAQTPSPSYTSPYYPPPQMMS 135
Query: 379 SDTPSSPEYKTEDKYSKIVMGMGDH 403
S+ + ++ S GDH
Sbjct: 136 SNQHDMSSHYYQESSSSSASTSGDH 160
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.9 bits (64), Expect = 9.9
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 791 LLAETGRAVDIADRLDLLPESLINCEDPLPGALHMAYKSRRGLYSLAQCRDERSVERTSE 850
+L+ R+V A ++LP L C +PLP + S + L DER++ +
Sbjct: 18 VLSRRHRSVICAGPYEVLP--LEGCSEPLPSTSTL---SELPIECLRLSTDERTIGAATN 72
Query: 851 TILKVCDL 858
ILKV D+
Sbjct: 73 AILKVADI 80
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.133 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,669,689
Number of Sequences: 27539
Number of extensions: 1105767
Number of successful extensions: 3213
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 3153
Number of HSP's gapped (non-prelim): 70
length of query: 1049
length of database: 12,573,161
effective HSP length: 89
effective length of query: 960
effective length of database: 10,122,190
effective search space: 9717302400
effective search space used: 9717302400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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