Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001210-TA|BGIBMGA001210-PA|IPR000210|BTB,
IPR011526|Helix-turn-helix, Psq-like, IPR009057|Homeodomain-like,
IPR013069|BTB/POZ, IPR007889|Helix-turn-helix, Psq
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family pr... 46 6e-05
At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family pr... 39 0.007
At3g03740.1 68416.m00379 speckle-type POZ protein-related contai... 38 0.021
At2g39760.1 68415.m04882 speckle-type POZ protein-related contai... 38 0.021
At5g21010.1 68418.m02497 speckle-type POZ protein-related contai... 36 0.065
At2g30600.2 68415.m03729 BTB/POZ domain-containing protein conta... 36 0.085
At2g30600.1 68415.m03728 BTB/POZ domain-containing protein conta... 36 0.085
At1g01640.2 68414.m00082 speckle-type POZ protein-related contai... 36 0.085
At1g01640.1 68414.m00081 speckle-type POZ protein-related contai... 36 0.085
At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Inter... 35 0.15
At3g43700.1 68416.m04664 speckle-type POZ protein-related contai... 34 0.20
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 33 0.60
At3g56230.1 68416.m06249 speckle-type POZ protein-related contai... 33 0.60
At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Inter... 32 0.80
At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ... 31 1.4
At3g06190.1 68416.m00711 speckle-type POZ protein-related simila... 31 1.8
At5g19000.1 68418.m02257 speckle-type POZ protein-related contai... 31 2.4
At1g64280.1 68414.m07284 regulatory protein (NPR1) identical to ... 30 3.2
At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ... 29 5.6
At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family pr... 29 5.6
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 5.6
At1g52370.1 68414.m05910 ribosomal protein L22 family protein s... 29 5.6
At5g01590.1 68418.m00074 expressed protein 29 7.4
At2g04740.1 68415.m00484 ankyrin repeat family protein contains ... 29 7.4
At5g62640.1 68418.m07862 proline-rich family protein contains pr... 29 9.8
At5g14540.1 68418.m01704 proline-rich family protein contains pr... 29 9.8
At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ... 29 9.8
At3g12420.1 68416.m01547 hypothetical protein 29 9.8
At3g06190.2 68416.m00712 speckle-type POZ protein-related simila... 29 9.8
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 29 9.8
>At5g19330.1 68418.m02303 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 710
Score = 46.0 bits (104), Expect = 6e-05
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 37 TNLVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADV--PMDHCSIL 94
T V + E + T D T +V+ + TF AHR+ L A+S F+++ D I
Sbjct: 525 TQRVYLGEQYVNNATLSDVTFLVEGR-TFYAHRICLLASSDAFRAMFDGGYREKDARDIE 583
Query: 95 FPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMTE 142
P +K ++ ++YTG V++T +++ A+Q ++GL + E
Sbjct: 584 IPNIKWEVFELMMRFIYTGSVDITNEISKDLLRAADQYLLEGLKRLCE 631
>At5g13060.1 68418.m01497 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 709
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/103 (21%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 37 TNLVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCS--IL 94
T V + E + T D T ++D + F AH++ L A+S F+++ + + + +
Sbjct: 524 TQQVFLGEKFVNNPTMSDVTFLIDGK-QFYAHKIGLVASSDIFRAMFDGLYKERNAQNVE 582
Query: 95 FPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGL 137
P ++ +++++Y+G +N+ + ++ A+Q ++GL
Sbjct: 583 IPNIRWEVFELMMKFIYSGRINIAKHLAKDLLVAADQYLLEGL 625
>At3g03740.1 68416.m00379 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 465
Score = 37.5 bits (83), Expect = 0.021
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 46 LIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVP-MDHCSILFPGVKDFEMR 104
L++ E D T V + F+AHR+VLAA SP F+S DV + I ++ +
Sbjct: 209 LLENEDGSDITFNVSGE-KFRAHRLVLAARSPVFESEFLDVTGEEDRDIEVTDMEPKVFK 267
Query: 105 ALLEYMY 111
ALL Y+Y
Sbjct: 268 ALLHYIY 274
>At2g39760.1 68415.m04882 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 408
Score = 37.5 bits (83), Expect = 0.021
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 37 TNLVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQS-ILADVPMDHCS-IL 94
+N+ + L+ L+ E D V D+ T+KAH+++LAA SP F++ + ++ I+
Sbjct: 178 SNMGQGLKDLLDSEVGCDIAFQVGDE-TYKAHKLILAARSPVFRAQFFGPIGNNNVDRIV 236
Query: 95 FPGVKDFEMRALLEYMYT 112
++ +A+L ++YT
Sbjct: 237 IDDIEPSIFKAMLSFIYT 254
>At5g21010.1 68418.m02497 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 410
Score = 35.9 bits (79), Expect = 0.065
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 65 FKAHRVVLAANSPYFQS-ILADVPMDHCSILFPGVKDFEMRALLEYMYTG----EVNVTQ 119
F AH++VLAA SP+F+S ++ ++ + ++ +ALL++MY +V
Sbjct: 209 FLAHKLVLAARSPFFKSKFFSEFEANNTEVTINDLEPKVFKALLQFMYKDSLPEDVEPAT 268
Query: 120 AHIPRIMKVAEQLE 133
AH +K++E E
Sbjct: 269 AHTFERLKLSEIYE 282
>At2g30600.2 68415.m03729 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 35.5 bits (78), Expect = 0.085
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 57 LVVDDQVTFKAHRVVLAANSPY-FQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEV 115
LV ++++ AH+V+L A+ + +S DV I GV + ALL+Y+YTG
Sbjct: 216 LVGEEEMDVPAHKVILQASGNFPLRSSDGDV------IQLRGVSYPILHALLQYIYTGRT 269
Query: 116 NVTQAHIPRIMKVAEQLEVKGLFDMTE 142
+ ++ + + ++ + EV L E
Sbjct: 270 QILESELAPLRDLSSKFEVMSLVRQCE 296
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 52 YVDCTLVVDDQ-VTFKAHRVVLAANSPYFQSILAD-VPMDHCSILF-PGVKDFEMRALLE 108
Y D + + D +TF++H+V+L+ S F + + + H S ++ V +A++
Sbjct: 350 YSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMN 409
Query: 109 YMYTGEVNV 117
+MY+GE+N+
Sbjct: 410 FMYSGELNM 418
>At2g30600.1 68415.m03728 BTB/POZ domain-containing protein contains
Pfam PF00651: BTB/POZ domain; contains Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to MigA
(GI:1841872) [Dictyostelium discoideum]
Length = 809
Score = 35.5 bits (78), Expect = 0.085
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 57 LVVDDQVTFKAHRVVLAANSPY-FQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEV 115
LV ++++ AH+V+L A+ + +S DV I GV + ALL+Y+YTG
Sbjct: 216 LVGEEEMDVPAHKVILQASGNFPLRSSDGDV------IQLRGVSYPILHALLQYIYTGRT 269
Query: 116 NVTQAHIPRIMKVAEQLEVKGLFDMTE 142
+ ++ + + ++ + EV L E
Sbjct: 270 QILESELAPLRDLSSKFEVMSLVRQCE 296
Score = 35.1 bits (77), Expect = 0.11
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 52 YVDCTLVVDDQ-VTFKAHRVVLAANSPYFQSILAD-VPMDHCSILF-PGVKDFEMRALLE 108
Y D + + D +TF++H+V+L+ S F + + + H S ++ V +A++
Sbjct: 350 YSDIKIYLSDHSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMN 409
Query: 109 YMYTGEVNV 117
+MY+GE+N+
Sbjct: 410 FMYSGELNM 418
>At1g01640.2 68414.m00082 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 35.5 bits (78), Expect = 0.085
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 68 HRVVLAANSPYFQSILADVPMDHC------SILFPGVKDFEMRALLEYMYTGEVNVTQAH 121
H+ VLAA S F+++L D C SI P + E+++LLE++Y+G +
Sbjct: 40 HKAVLAARSKVFRNMLDS---DECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 122 IPRIMKVAEQLEVKGLFDM 140
+ A++ ++ L D+
Sbjct: 97 YRSLYLAADKYDISYLQDV 115
>At1g01640.1 68414.m00081 speckle-type POZ protein-related contains
Pfam profile:PF00651 BTB/POZ domain; similar to
Speckle-type POZ protein (SP:O43791) [Homo sapiens]
Length = 207
Score = 35.5 bits (78), Expect = 0.085
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 68 HRVVLAANSPYFQSILADVPMDHC------SILFPGVKDFEMRALLEYMYTGEVNVTQAH 121
H+ VLAA S F+++L D C SI P + E+++LLE++Y+G +
Sbjct: 40 HKAVLAARSKVFRNMLDS---DECKTSPEESITLPDLSHDELKSLLEFLYSGNLKAPYNQ 96
Query: 122 IPRIMKVAEQLEVKGLFDM 140
+ A++ ++ L D+
Sbjct: 97 YRSLYLAADKYDISYLQDV 115
>At1g55760.1 68414.m06384 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 329
Score = 34.7 bits (76), Expect = 0.15
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 8/116 (6%)
Query: 33 NHHKTNLVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSI-LADVPMDHC 91
N + V L ++ Y D T+ D + AHR VLAA SP F+S+ L D+
Sbjct: 144 NQSQVTAVTSLGRMLTESIYTDITINASDG-SIGAHRAVLAARSPVFRSMFLHDLKEKEL 202
Query: 92 SILFPGVKDFEM---RALLEYMYTGEVNVT-QAHIPRIMKVAEQLEVKGLFDMTEL 143
S + V D + +A L Y+Y N H +++ AE+ ++ L + L
Sbjct: 203 SEI--NVLDMPLDACQAFLSYIYGNIQNEDFLIHRLALLQAAEKYDIADLKEACHL 256
>At3g43700.1 68416.m04664 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 415
Score = 34.3 bits (75), Expect = 0.20
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 65 FKAHRVVLAANSPYFQSILADVPMDHCS-ILFPGVKDFEMRALLEYMY----TGEVNVTQ 119
F+AH++VLAA S +F+S+ + ++ S ++ ++ +ALL +MY G+V
Sbjct: 216 FQAHKLVLAARSQFFRSMFYNTLAENNSDVVISDLEPKVFKALLHFMYKDSLPGDVEPLT 275
Query: 120 AHIPRIMKVAE 130
AH +++ +E
Sbjct: 276 AHSFDLLRPSE 286
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain,
PF00023: Ankyrin repeat and Pfam domain, PF00651:
BTB/POZ domain
Length = 467
Score = 32.7 bits (71), Expect = 0.60
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 36 KTNLVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILAD 85
K+ ++ L LI G+ + D T V+ ++ AHR +LAA S +F+ +
Sbjct: 10 KSMSLDYLNLLINGQAFSDVTFSVEGRLVH-AHRCILAARSLFFRKFFCE 58
>At3g56230.1 68416.m06249 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 282
Score = 32.7 bits (71), Expect = 0.60
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 60 DDQVTFKAHRVVLAANSPYFQSILAD---VPMDHCSILFPGVKDFEMRALLEYMYTG 113
DD AHR +LA+ S F++IL +I + +++ALLE++YTG
Sbjct: 119 DDGPPIPAHRALLASKSEIFKNILDSDGCKTAPEYAITLQELNSEQLQALLEFLYTG 175
>At4g08455.1 68417.m01394 BTB/POZ domain-containing protein Interpro
IPR000210/ PS50097: BTBB/POZ domain; similar to POZ 56
protein (GI:17483747) [Mus musculus]
Length = 243
Score = 32.3 bits (70), Expect = 0.80
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 67 AHRVVLAANSPYFQSILADVPMDHCS--ILFPGVKDFEMRALLEYMYTGEVNVTQAHIPR 124
AH+ VL + SP F+++L + + S I V +R + Y+YT E + +
Sbjct: 82 AHKSVLVSRSPVFKAMLENEMEESLSGTIKISDVSYDALRTFVYYLYTAEACLDEQMACD 141
Query: 125 IMKVAEQLEVKGL 137
++ ++E+ +VK L
Sbjct: 142 LLVMSEKYQVKHL 154
>At2g41370.1 68415.m05106 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain,
PF00023: Ankyrin repeat and Pfam domain, PF00651:
BTB/POZ domain
Length = 491
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 40 VEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQ 80
++ L LI G+ + D T V+ ++ AHR +LAA S +F+
Sbjct: 13 LDFLNLLINGQAFSDVTFSVEGRLVH-AHRCILAARSLFFR 52
>At3g06190.1 68416.m00711 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 406
Score = 31.1 bits (67), Expect = 1.8
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 46 LIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQS-ILADVPMDHCS-ILFPGVKDFEM 103
L++ D T VD + TF AH++VLAA S F++ + + ++ + I+ V+
Sbjct: 195 LLESGKGADVTFEVDGE-TFPAHKLVLAARSAVFRAQLFGPLRSENTNCIIIEDVQAPIF 253
Query: 104 RALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGL 137
+ LL ++Y E+ Q I +K A L + L
Sbjct: 254 KMLLHFIYWDEMPDMQDLIGTDLKWASTLVAQHL 287
>At5g19000.1 68418.m02257 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; contains Pfam PF00917:
MATH domain; similar to Speckle-type POZ protein
(SP:O43791) [Homo sapiens]
Length = 442
Score = 30.7 bits (66), Expect = 2.4
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 37 TNLVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSIL 83
+NL + L L++ D VD + TF AH++VLA SP F + L
Sbjct: 187 SNLGQQLGNLLESGKGCDVVFQVDGE-TFNAHKLVLATRSPVFNAQL 232
>At1g64280.1 68414.m07284 regulatory protein (NPR1) identical to
regulatory protein NPR1 (nonexpresser of PR genes 1,
NPR1; noninducible immunity 1, Nim1; salicylic acid
insensitive 1, Sai1) [Arabidopsis thaliana]
SWISS-PROT:P93002
Length = 593
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 52 YVDCTLVVDDQVTFKAHRVVLAANSPYFQSILA 84
Y D LV+ D HR VL+A S +F+S LA
Sbjct: 64 YSDAKLVLSDGREVSFHRCVLSARSSFFKSALA 96
>At5g45110.1 68418.m05536 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain,
PF00023: Ankyrin repeat and Pfam domain, PF00651:
BTB/POZ domain
Length = 586
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 37 TNLVEILEALIKGET--YVDCTLVVDDQVTFKAHRVVLAANSPYFQSI 82
T L LE L+ Y D ++VD V HR +LAA S +FQ +
Sbjct: 42 TKLSSNLEQLLSNSDCDYSDAEIIVDG-VPVGVHRCILAARSKFFQDL 88
>At5g19330.2 68418.m02304 armadillo/beta-catenin repeat family
protein / BTB/POZ domain-containing protein contains
armadillo/beta-catenin-like repeats, Pfam:PF00514 and a
BTB/POZ domain, Pfam:PF00651
Length = 636
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 89 DHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMTE 142
D I P +K ++ ++YTG V++T +++ A+Q ++GL + E
Sbjct: 530 DARDIEIPNIKWEVFELMMRFIYTGSVDITNEISKDLLRAADQYLLEGLKRLCE 583
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.5 bits (63), Expect = 5.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 297 PYTERSFEEETPRNFHPSPPPTNFQHDVRAGLAPYVPPQQKP 338
P T +F+ P N P PPP + A P +PP+ P
Sbjct: 53 PPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLP 94
>At1g52370.1 68414.m05910 ribosomal protein L22 family protein
similar to GB:Z67753 from [Odontella sinensis]
Length = 269
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 365 LQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKREPNGAAFPYGLTGAGGNDE 418
LQ+ + SR LY +++LGI+TSR + G + + + P L G+G +E
Sbjct: 44 LQSLLRSTYSSRPLYYHLQQLGISTSRQLQAGEEPVSSPLSSP-ALLGSGKEEE 96
>At5g01590.1 68418.m00074 expressed protein
Length = 424
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 318 TNFQHDVRAGLAPYVPPQQKPEWKRYKQYTRSDILSAIECVRNGMSALQAS 368
T F H ++ G+ P+VP + + E K YKQ + AIE + M+ L+A+
Sbjct: 305 TAFLHKLQKGIPPWVPLKGR-EPKTYKQLQK----EAIESKKRDMAVLEAN 350
>At2g04740.1 68415.m00484 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 578
Score = 29.1 bits (62), Expect = 7.4
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 50 ETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDH------CSILFPGVKDFEM 103
E+ D + VD + F H+V+LA+ S YF++ L+ V H P +++ ++
Sbjct: 335 ESLADVCVRVDKR-NFYCHQVILASRSEYFRARLSRVNDFHEGKNGLPGDTLPFLEEHDL 393
Query: 104 RA-----LLEYMYTG---EVNVTQA 120
A ++EYMYT E+N QA
Sbjct: 394 SAEAFEKMIEYMYTDGLKEINPNQA 418
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/79 (20%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 66 KAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDF--EMRALLEYMYTGEVNVTQAHIP 123
+AHRV+L+A SP+F+ + D + F K + +L+ + Y+ + ++ +
Sbjct: 185 EAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYSDRLEISVDDME 244
Query: 124 RIMKVAEQLEVKGLFDMTE 142
++++ + + + L + E
Sbjct: 245 DLVRICKVCKCESLQKIIE 263
>At5g62640.1 68418.m07862 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 520
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
Query: 313 PSPPPTNFQHDVRAGLAPYVP 333
P PPP++FQ D +A + PYVP
Sbjct: 398 PGPPPSSFQ-DGQAMIRPYVP 417
>At5g14540.1 68418.m01704 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 547
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 297 PYTERSFEEETPRNFHPS---PPPTNFQHDVRAGLAPYVPPQQKPEW 340
PY S + + P P PPPT H PY PP Q+P++
Sbjct: 296 PYFPPSGQSQPPPTIQPPYQPPPPTQSLHQ-----PPYQPPPQQPQY 337
>At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 600
Score = 28.7 bits (61), Expect = 9.8
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 52 YVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSI-----LFPGVKDFEMR-- 104
Y D LV+ HR +L+A P F+S LA V S L +D+E+
Sbjct: 66 YSDAKLVLAGGREVSFHRCILSARIPVFKSALATVKEQKSSTTVKLQLKEIARDYEVGFD 125
Query: 105 ---ALLEYMYTGEV 115
A+L Y+Y+G V
Sbjct: 126 SVVAVLAYVYSGRV 139
>At3g12420.1 68416.m01547 hypothetical protein
Length = 308
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 291 SEDAHSPYTERSFEEETPRNFHPSPPPTNFQHD 323
S DA+ P + PR++ P+PPP + D
Sbjct: 70 SYDANPPPDRYYSDHHPPRSYDPNPPPNRYYSD 102
>At3g06190.2 68416.m00712 speckle-type POZ protein-related similar
to SPOP (novel nuclear speckle-type protein)
(SP:O43791) [Homo sapiens]; contains Pfam PF00651 :
BTB/POZ domain; contains Pfam PF00917: MATH domain
Length = 295
Score = 28.7 bits (61), Expect = 9.8
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 46 LIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSIL 83
L++ D T VD + TF AH++VLAA S F++ L
Sbjct: 195 LLESGKGADVTFEVDGE-TFPAHKLVLAARSAVFRAQL 231
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 286 HRSDRSEDAHSPYTERSFEEETPRNFHPSPPP 317
+R +RSE SP R + PR H SP P
Sbjct: 1493 NREERSESMRSPINRRFRASQEPRYDHQSPRP 1524
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.133 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,297,261
Number of Sequences: 28952
Number of extensions: 447183
Number of successful extensions: 1321
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1302
Number of HSP's gapped (non-prelim): 36
length of query: 516
length of database: 12,070,560
effective HSP length: 84
effective length of query: 432
effective length of database: 9,638,592
effective search space: 4163871744
effective search space used: 4163871744
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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