GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001209-TA|BGIBMGA001209-PA|IPR000717|Proteasome
component region PCI
         (423 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic pr...    26   1.7  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          26   2.2  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            25   2.9  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            25   2.9  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            25   2.9  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            25   2.9  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            25   2.9  
AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal glutath...    25   3.9  

>AF269153-1|AAF91398.1|  109|Anopheles gambiae labial homeotic
           protein protein.
          Length = 109

 Score = 26.2 bits (55), Expect = 1.7
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 257 LKPLSAPYHDLVASQHAASKHREIFVRDKNMGLVNQVLNSMYKKNIQRLTKTFLTLSLSD 316
           L PL  P H  V +  A S H+  F+ + N    +    +   K +  L K F       
Sbjct: 24  LDPLRVPNHTTVVAPSAVSPHQSSFMINNN----STGRTNFTNKQLTELEKEFHFNKYLT 79

Query: 317 VASRVELSGPL 327
            A R+E++  L
Sbjct: 80  RARRIEIANAL 90


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 2.2
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 355 FLDSPEKYASPETLCVLEQQMAACTKLHQYIQEMDVQIQV-NPQYVKKSVG 404
           ++ SP+   S  T   L+QQ     +LHQ +Q+   Q Q+ +P Y++ ++G
Sbjct: 197 YVTSPQP--SQVTSRQLQQQQLQPNQLHQQLQQQQQQQQLSSPCYMEATLG 245


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 11/25 (44%), Positives = 21/25 (84%), Gaps = 2/25 (8%)

Query: 117 IKQPIRGLEILKKAIRKIQLFDSQL 141
           ++QP +G+E++K+AIR++Q F  Q+
Sbjct: 7   VEQP-KGIEVVKEAIRRLQ-FTQQM 29


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 11/25 (44%), Positives = 21/25 (84%), Gaps = 2/25 (8%)

Query: 117 IKQPIRGLEILKKAIRKIQLFDSQL 141
           ++QP +G+E++K+AIR++Q F  Q+
Sbjct: 7   VEQP-KGIEVVKEAIRRLQ-FTQQM 29


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 11/25 (44%), Positives = 21/25 (84%), Gaps = 2/25 (8%)

Query: 117 IKQPIRGLEILKKAIRKIQLFDSQL 141
           ++QP +G+E++K+AIR++Q F  Q+
Sbjct: 7   VEQP-KGIEVVKEAIRRLQ-FTQQM 29


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 11/25 (44%), Positives = 21/25 (84%), Gaps = 2/25 (8%)

Query: 117 IKQPIRGLEILKKAIRKIQLFDSQL 141
           ++QP +G+E++K+AIR++Q F  Q+
Sbjct: 7   VEQP-KGIEVVKEAIRRLQ-FTQQM 29


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 11/25 (44%), Positives = 21/25 (84%), Gaps = 2/25 (8%)

Query: 117 IKQPIRGLEILKKAIRKIQLFDSQL 141
           ++QP +G+E++K+AIR++Q F  Q+
Sbjct: 7   VEQP-KGIEVVKEAIRRLQ-FTQQM 29


>AY278447-1|AAP37004.1|  152|Anopheles gambiae microsomal
           glutathione transferase GSTMIC2protein.
          Length = 152

 Score = 25.0 bits (52), Expect = 3.9
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 226 EAYKKYILVSLILHGKVLPMPKYTSQVVCRFL-KPLSAPYHDLVASQHAASKH 277
           EAYK Y+  S +L  K+L M   T+  + RF  K  ++P    V S+    K+
Sbjct: 11  EAYKAYVFWSAVLVAKMLLMALLTA--IQRFKNKAFASPEDTRVISKKLVPKY 61


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.135    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 420,095
Number of Sequences: 2123
Number of extensions: 16804
Number of successful extensions: 50
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 49
Number of HSP's gapped (non-prelim): 8
length of query: 423
length of database: 516,269
effective HSP length: 66
effective length of query: 357
effective length of database: 376,151
effective search space: 134285907
effective search space used: 134285907
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 49 (23.8 bits)