GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001208-TA|BGIBMGA001208-PA|IPR011046|WD40-like
         (782 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    28   0.28 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    24   4.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   8.0  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 216 DDFSVMQVLYVDRLTNNVFLAIVNTGVLSAYADEINTV 253
           D+ +V ++L  +RL  N F  I++ G  +  ADE+  V
Sbjct: 24  DNINVDEILASERLLKNYFNCIMDRGACTPDADELKRV 61


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 10/35 (28%), Positives = 18/35 (51%)

Query: 216 DDFSVMQVLYVDRLTNNVFLAIVNTGVLSAYADEI 250
           D+  + ++L  DRL  N F  ++  G  S   +E+
Sbjct: 29  DNIDLEEILKSDRLLKNYFNCLMERGTCSPDGEEL 63


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 690 IFTDRSVKKDIAPLLEQNVYKVLEK 714
           IF D S +K    LL   +YKVLE+
Sbjct: 199 IFPD-SARKPFFKLLTSKIYKVLEE 222


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 36   GEVQIHRLHWQKV 48
            G++Q  ++HWQK+
Sbjct: 1346 GQLQASQIHWQKI 1358


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.135    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,683
Number of Sequences: 317
Number of extensions: 7971
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 5
length of query: 782
length of database: 114,650
effective HSP length: 62
effective length of query: 720
effective length of database: 94,996
effective search space: 68397120
effective search space used: 68397120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)