Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001208-TA|BGIBMGA001208-PA|IPR011046|WD40-like
(782 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1265|AAF46439.1| 775|Drosophila melanogaster CG32707-P... 247 4e-65
AY061618-1|AAL29166.1| 775|Drosophila melanogaster SD08238p pro... 244 4e-64
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 33 1.1
AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p pro... 33 2.0
AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA ... 33 2.0
AE013599-2913|AAF57545.1| 1366|Drosophila melanogaster CG11237-P... 31 4.6
BT011452-1|AAR99110.1| 518|Drosophila melanogaster RE40416p pro... 31 6.1
AY051611-1|AAK93035.1| 703|Drosophila melanogaster GH25580p pro... 31 6.1
AF454351-1|AAL91725.1| 1258|Drosophila melanogaster unconvention... 31 6.1
AF454350-1|AAL91724.1| 1278|Drosophila melanogaster unconvention... 31 6.1
AE014297-3477|AAZ52541.1| 864|Drosophila melanogaster CG5501-PH... 31 6.1
AE014297-3476|AAZ52540.1| 844|Drosophila melanogaster CG5501-PI... 31 6.1
AE014297-3475|AAZ52539.1| 1288|Drosophila melanogaster CG5501-PE... 31 6.1
AE014297-3474|AAS65205.1| 1278|Drosophila melanogaster CG5501-PD... 31 6.1
AE014297-3473|AAS65204.1| 1258|Drosophila melanogaster CG5501-PB... 31 6.1
>AE014298-1265|AAF46439.1| 775|Drosophila melanogaster CG32707-PA
protein.
Length = 775
Score = 247 bits (605), Expect = 4e-65
Identities = 213/762 (27%), Positives = 344/762 (45%), Gaps = 47/762 (6%)
Query: 5 MRQVGERHVPYQVDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVWSLPPPKENGCVQAMA 64
M+ +G R++ V+ M W+N++DL+A KGEV I RL+WQK+ + P P E+ V++++
Sbjct: 7 MKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQRLNWQKIVTFPTPGEDVRVRSLS 66
Query: 65 WRPDGKALAIGYNLGIIYTVSVEDKGIIDKYXXXXXXXXXXXXAKYSGISCIVWAIRTDI 124
W+ D LA+GY+ G + + E II AI +
Sbjct: 67 WQMDETLLAVGYSNGKVALLDAESGTIISGLIYEDDIKKVYFSK----------AINSQE 116
Query: 125 LQSATEYNLYDDASIFLQKV-PMSSGYKNSHEDNKDCKYIQNPTQLNMLIVGYGTGNIYL 183
N+ D FL K+ PM++ + D K + L+V +G ++L
Sbjct: 117 NLGTYTCNVKDKHRRFLPKLQPMTN--IDPCLKTLDQKSFPKGSPC-FLVVIMRSGKVHL 173
Query: 184 NMYGRYPYGTIQLAEVAKDDFGEYKVLDVNMSDDFSVMQVLYVDRLTNNVFLAIVNTGVL 243
+ G G+I L + E+ V DV M+ D + + L D + L N +
Sbjct: 174 LLLGALQAGSIDLTQHILHPH-EFDVYDVRMNGDCNAIYALLRDG-QELILLHFQNQVLQ 231
Query: 244 SAYADEINTVAHKHGQIVQLMTQLDQTMISITEAWEHILLEMDTKMAYYASSVHEGGVSA 303
A + H I++ ++ T +TEAWE + LEMD K+ YA+S G +SA
Sbjct: 232 DCMAPMLELATHC-AHILETKNYINDTQQCLTEAWETVQLEMDNKLTRYANSQPYGVISA 290
Query: 304 DLLELLMLGTPSVDLQVYLLEKLTTNDLKKFGNSVELSYSTIQKLVLKQLNIVGQSLVYY 363
LEL + G + +++ +L E L+ KK NSV+LS S +Q LV KQLN ++ Y+
Sbjct: 291 HFLELHVFGFATFEVEEFLFETLSEKGFKKIANSVDLSLSNLQSLVFKQLNGAAINMFYF 350
Query: 364 LAELRGLTRIEDRYKILGLEESSVTEAIKACCAFLNKCLELQQVIDVSMRNYKAFFRWLF 423
L + G R+ ++ L + EA++AC F+ K ELQ+ ID + K F W+
Sbjct: 351 LNTIAGFGRMSHFFESL-ISPDVANEAMRACGGFVLKVHELQRTIDTLAYDMKLFHAWMI 409
Query: 424 VVIVRQLDEQTPSEIVKINQQELSHIAEFL---------YNFDNVKVDS-SDKPPDKLIT 473
I+R ++ P ++V + ++E +A+F+ + D ++DS S PP
Sbjct: 410 FTILRLSHQEIPDDLV-LTEEENIAMADFICAMEPELDDRSDDEDELDSQSQTPPPARSK 468
Query: 474 FNLERLGQYLQNQELT-ILPEDEDNTWHKFLQDNACFLKDNDTFFSMKDFKKYSLVQQQA 532
FNLER+GQYL N LT + P D W + + DN C N F D SLVQQ+
Sbjct: 469 FNLERVGQYLDNAYLTQLYPRDPVQLWEEMVTDNECL--SNCKLFVPHDV-NLSLVQQRD 525
Query: 533 HLIETVTKVFDVVHKDTGKYFSVLCNIRCHE----DQLNKNLHNSLRVSQVFDDTNKRLM 588
+ + VF + F V + C++ + + L + + R
Sbjct: 526 KMFNAIDAVFHKPTESISGSFKVSSTVICNDLPPMEPGEDHRDRDLVTCTYYVNEASRTD 585
Query: 589 SAFLDISNGKEGIYFLAVNIKERSCNIAVMKCYFSSYLVQNGTDDQQNEPTNLLDLQFYS 648
IS G+E + L + C + + L + +DLQFY+
Sbjct: 586 MLACTIS-GQEAM-ILEFSRAGDEC-VRCTRITLEPGLFTTSVSEDFCY-LRFVDLQFYN 641
Query: 649 PEYLSV----ITTHPENEENTIFIQVPVKHLLENSTELNINTKSCIFTDRSVKKDIAPLL 704
LS+ I P ++ FIQ + L ST+ + + ++ +V + I +
Sbjct: 642 ESSLSILAQSINAGPGMRPHSFFIQFSLTAALNYSTQHRMGPLVKL-SEATVSQSIHDIA 700
Query: 705 EQNVYKVLEKMDGSRLAVSGGRKVAVILSKSSRKVRVFEMEV 746
+ +K L+ LAVSG RKVA +LS RK+ +FEME+
Sbjct: 701 DGAAFKGLDGF-SDMLAVSGSRKVATVLSDRKRKMTIFEMEI 741
>AY061618-1|AAL29166.1| 775|Drosophila melanogaster SD08238p
protein.
Length = 775
Score = 244 bits (597), Expect = 4e-64
Identities = 212/762 (27%), Positives = 343/762 (45%), Gaps = 47/762 (6%)
Query: 5 MRQVGERHVPYQVDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVWSLPPPKENGCVQAMA 64
M+ +G R++ V+ M W+N++DL+A KGEV I RL+WQK+ + P P E+ V++++
Sbjct: 7 MKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQRLNWQKIVTFPTPGEDVRVRSLS 66
Query: 65 WRPDGKALAIGYNLGIIYTVSVEDKGIIDKYXXXXXXXXXXXXAKYSGISCIVWAIRTDI 124
W+ D LA+GY+ G + + E II AI +
Sbjct: 67 WQMDETLLAVGYSNGKVALLDAESGTIISGLIYEDDIKKVYFSK----------AINSQE 116
Query: 125 LQSATEYNLYDDASIFLQKV-PMSSGYKNSHEDNKDCKYIQNPTQLNMLIVGYGTGNIYL 183
N+ D FL K+ PM++ + D K + L+V +G ++L
Sbjct: 117 NLGTYTCNVKDKHRRFLPKLQPMTN--IDPCLKTLDQKSFPKGSPC-FLVVIMRSGKVHL 173
Query: 184 NMYGRYPYGTIQLAEVAKDDFGEYKVLDVNMSDDFSVMQVLYVDRLTNNVFLAIVNTGVL 243
+ G G+I L + E+ V DV M+ D + + L D + L N +
Sbjct: 174 LLLGALQAGSIDLTQHILHPH-EFDVYDVRMNGDCNAIYALLRDG-QELILLHFQNQVLQ 231
Query: 244 SAYADEINTVAHKHGQIVQLMTQLDQTMISITEAWEHILLEMDTKMAYYASSVHEGGVSA 303
A + H I++ ++ T +TEAWE + LEMD K+ YA+S G +SA
Sbjct: 232 DCMAPMLELATHC-AHILETKNYINDTQQCLTEAWETVQLEMDNKLTRYANSQPYGVISA 290
Query: 304 DLLELLMLGTPSVDLQVYLLEKLTTNDLKKFGNSVELSYSTIQKLVLKQLNIVGQSLVYY 363
LEL + G + +++ +L E L+ KK NSV+LS S +Q LV KQLN ++ Y+
Sbjct: 291 HFLELHVFGFATFEVEEFLFETLSEKGFKKIANSVDLSLSNLQSLVFKQLNGAAINMFYF 350
Query: 364 LAELRGLTRIEDRYKILGLEESSVTEAIKACCAFLNKCLELQQVIDVSMRNYKAFFRWLF 423
L + G R+ ++ L + EA++AC F+ K ELQ+ ID + K F W+
Sbjct: 351 LNTIAGFGRMSHFFESL-ISPDVANEAMRACGGFVLKVHELQRTIDTLAYDMKLFHAWMI 409
Query: 424 VVIVRQLDEQTPSEIVKINQQELSHIAEFL---------YNFDNVKVDS-SDKPPDKLIT 473
I+R ++ P ++V + ++E +A+F+ + D ++DS S PP
Sbjct: 410 FTILRLSHQEIPDDLV-LTEEENIAMADFICAMEPELDDRSDDEDELDSQSQTPPPARSK 468
Query: 474 FNLERLGQYLQNQELT-ILPEDEDNTWHKFLQDNACFLKDNDTFFSMKDFKKYSLVQQQA 532
FNLER+GQYL N LT + P D W + + DN C N F D SLVQQ+
Sbjct: 469 FNLERVGQYLDNAYLTQLYPRDPVQLWEEMVTDNECL--SNCKLFVPHDV-NLSLVQQRD 525
Query: 533 HLIETVTKVFDVVHKDTGKYFSVLCNIRCHE----DQLNKNLHNSLRVSQVFDDTNKRLM 588
+ + V + F V + C++ + + L + + R
Sbjct: 526 KMFNAIDAVSHKPTESISGSFKVSSTVICNDLPPMEPGEDHRDRDLVTCTYYVNEASRTD 585
Query: 589 SAFLDISNGKEGIYFLAVNIKERSCNIAVMKCYFSSYLVQNGTDDQQNEPTNLLDLQFYS 648
IS G+E + L + C + + L + +DLQFY+
Sbjct: 586 MLACTIS-GQEAM-ILEFSRAGDEC-VRCTRITLEPGLFTTSVSEDFCY-LRFVDLQFYN 641
Query: 649 PEYLSV----ITTHPENEENTIFIQVPVKHLLENSTELNINTKSCIFTDRSVKKDIAPLL 704
LS+ I P ++ FIQ + L ST+ + + ++ +V + I +
Sbjct: 642 ESSLSILAQSINAGPGMRPHSFFIQFSLTAALNYSTQHRMGPLVKL-SEATVSQSIHDIA 700
Query: 705 EQNVYKVLEKMDGSRLAVSGGRKVAVILSKSSRKVRVFEMEV 746
+ +K L+ LAVSG RKVA +LS RK+ +FEME+
Sbjct: 701 DGAAFKGLDGF-SDMLAVSGSRKVATVLSDRKRKMTIFEMEI 741
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 33.5 bits (73), Expect = 1.1
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 12/152 (7%)
Query: 569 NLHNSLRVSQVFDDTNKRLMSAFLDISNGKEGIYFLAVNIKERSCNIAVMKC-YFSSYLV 627
NL N + ++ + N SA+ ++ N + I L + ++ + Y +
Sbjct: 65 NLDNQVSITGGLNTANAG--SAYFEVCNNSDQIQTLYLEEPLQAEEFSSQTHQYLNCMTA 122
Query: 628 QNGTDDQQNEPTNLLDLQFYSPEYLSVITTHPE------NEENTIFIQVPVKHLLENSTE 681
T+ Q ++ N+L S E ++ NE N + +KH + +
Sbjct: 123 ATDTERQDDQQLNILTEHLNSEEKQYILKLCKSFKRLFHNENNQLTFSNAIKHSIPTTDN 182
Query: 682 LNINTKSCIFT---DRSVKKDIAPLLEQNVYK 710
+ I+TKS + V+K I+ +LEQN+ K
Sbjct: 183 IPIHTKSYRYPFVHKDEVRKQISKMLEQNIIK 214
>AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p
protein.
Length = 1205
Score = 32.7 bits (71), Expect = 2.0
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 17 VDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVW--SLPPPKENGCVQAMAWRPDGKALAI 74
V ++ W++ L S+ G + + L+ + W + ++ V +M+W DG + I
Sbjct: 75 VRVVTWNDAQQKLTSSDTDGVIMVWMLY-KGSWYEEMTNDRKKSTVASMSWTSDGSRICI 133
Query: 75 GYNLGIIYTVSVEDKGIIDK 94
Y G I SV+ I K
Sbjct: 134 VYEDGAIIVGSVDGNRIFGK 153
>AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA
protein.
Length = 1205
Score = 32.7 bits (71), Expect = 2.0
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Query: 17 VDLMVWSNRLDLLALSNNKGEVQIHRLHWQKVW--SLPPPKENGCVQAMAWRPDGKALAI 74
V ++ W++ L S+ G + + L+ + W + ++ V +M+W DG + I
Sbjct: 75 VRVVTWNDAQQKLTSSDTDGVIMVWMLY-KGSWYEEMTNDRKKSTVASMSWTSDGSRICI 133
Query: 75 GYNLGIIYTVSVEDKGIIDK 94
Y G I SV+ I K
Sbjct: 134 VYEDGAIIVGSVDGNRIFGK 153
>AE013599-2913|AAF57545.1| 1366|Drosophila melanogaster CG11237-PA
protein.
Length = 1366
Score = 31.5 bits (68), Expect = 4.6
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 26 LDLLALSNNKGEVQIHRL-HWQKVWSLPPPKENGCVQAMAWRPDGKALAIGYNLGIIY 82
LD++A S ++IH + + Q+ + ++ VQ + W PDG+ LA+ N G +Y
Sbjct: 286 LDIVA-SCGDDSIKIHSITNLQETERIITVPDHAGVQMIDWSPDGQLLAVTTNHGTVY 342
>BT011452-1|AAR99110.1| 518|Drosophila melanogaster RE40416p
protein.
Length = 518
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 441 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 469
>AY051611-1|AAK93035.1| 703|Drosophila melanogaster GH25580p
protein.
Length = 703
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 626 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 654
>AF454351-1|AAL91725.1| 1258|Drosophila melanogaster unconventional
myosin 95E isoformII protein.
Length = 1258
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 1181 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 1209
>AF454350-1|AAL91724.1| 1278|Drosophila melanogaster unconventional
myosin 95E isoformI protein.
Length = 1278
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 1201 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 1229
>AE014297-3477|AAZ52541.1| 864|Drosophila melanogaster CG5501-PH,
isoform H protein.
Length = 864
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 787 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 815
>AE014297-3476|AAZ52540.1| 844|Drosophila melanogaster CG5501-PI,
isoform I protein.
Length = 844
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 767 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 795
>AE014297-3475|AAZ52539.1| 1288|Drosophila melanogaster CG5501-PE,
isoform E protein.
Length = 1288
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 1211 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 1239
>AE014297-3474|AAS65205.1| 1278|Drosophila melanogaster CG5501-PD,
isoform D protein.
Length = 1278
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 1201 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 1229
>AE014297-3473|AAS65204.1| 1258|Drosophila melanogaster CG5501-PB,
isoform B protein.
Length = 1258
Score = 31.1 bits (67), Expect = 6.1
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 523 KKYSLVQQQAHLIETVTKVFDVVHKDTGK 551
KK V Q H+IE VTK+F V+ TGK
Sbjct: 1181 KKGDFVFQTGHVIEIVTKMFLVIQNATGK 1209
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.319 0.135 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,115,759
Number of Sequences: 52641
Number of extensions: 1575944
Number of successful extensions: 4131
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4106
Number of HSP's gapped (non-prelim): 21
length of query: 782
length of database: 24,830,863
effective HSP length: 91
effective length of query: 691
effective length of database: 20,040,532
effective search space: 13848007612
effective search space used: 13848007612
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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