GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001207-TA|BGIBMGA001207-PA|undefined
         (81 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   0.54 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   0.54 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    20   2.9  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    20   2.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   3.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   3.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   3.8  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    19   8.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    19   8.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    19   8.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   8.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   8.8  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    19   8.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    19   8.8  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 0.54
 Identities = 8/24 (33%), Positives = 17/24 (70%)

Query: 42  LIDTLQRTQLDAFRELLDSVRQSA 65
           LI T+ + + +A   ++DS+RQ++
Sbjct: 182 LILTVLKARFEAINNIIDSIRQNS 205


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 0.54
 Identities = 8/24 (33%), Positives = 17/24 (70%)

Query: 42  LIDTLQRTQLDAFRELLDSVRQSA 65
           LI T+ + + +A   ++DS+RQ++
Sbjct: 182 LILTVLKARFEAINNIIDSIRQNS 205


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 33  CFRPEDITMLIDTLQRTQLDA 53
           CF  +     IDTLQR+  +A
Sbjct: 89  CFTTDYFKGCIDTLQRSDEEA 109


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 33  CFRPEDITMLIDTLQRTQLDA 53
           CF  +     IDTLQR+  +A
Sbjct: 89  CFTTDYFKGCIDTLQRSDEEA 109


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)

Query: 32  VCFRPEDITMLI 43
           VCFRP + ++LI
Sbjct: 403 VCFRPRNNSILI 414


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 61  VRQSATPTFDHQISYLV 77
           V  +  PT+ H+++YL+
Sbjct: 205 VTYNVFPTYAHELTYLL 221


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.8 bits (39), Expect = 3.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)

Query: 61  VRQSATPTFDHQISYLV 77
           V  +  PT+ H+++YL+
Sbjct: 205 VTYNVFPTYAHELTYLL 221


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 34  FRPEDITMLIDTLQRTQ 50
           F+PE + +L+D +++ +
Sbjct: 166 FQPEALHLLVDYMKKNK 182


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 34  FRPEDITMLIDTLQRTQ 50
           F+PE + +L+D +++ +
Sbjct: 480 FQPEALHLLVDYMKKNK 496


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)

Query: 36  PEDITMLIDTLQRTQ 50
           PE I +++D + RT+
Sbjct: 480 PETIVLVVDIVLRTK 494


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 34  FRPEDITMLIDTLQRTQ 50
           F+PE + +L+D +++ +
Sbjct: 713 FQPEALHLLVDYMKKNK 729


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 34  FRPEDITMLIDTLQRTQ 50
           F+PE + +L+D +++ +
Sbjct: 713 FQPEALHLLVDYMKKNK 729


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative
          cytochrome P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)

Query: 39 ITMLIDTLQRTQLDAFRELLDSVRQSATPTFD 70
          I + +  LQ  Q     E+L  V +   PT++
Sbjct: 8  ILLTLANLQDIQTKVREEILSVVGKEKIPTYN 39


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 18.6 bits (36), Expect = 8.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)

Query: 36  PEDITMLIDTLQRTQ 50
           PE I +++D + RT+
Sbjct: 480 PETIVLVVDIVLRTK 494


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,738
Number of Sequences: 317
Number of extensions: 344
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of query: 81
length of database: 114,650
effective HSP length: 46
effective length of query: 35
effective length of database: 100,068
effective search space:  3502380
effective search space used:  3502380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.5 bits)
S2: 36 (18.6 bits)