GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001207-TA|BGIBMGA001207-PA|undefined
         (81 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051888-1|AAK93312.1|  503|Drosophila melanogaster LD37690p pro...    25   9.5  
AE014297-4320|AAF56856.1|  503|Drosophila melanogaster CG11877-P...    25   9.5  

>AY051888-1|AAK93312.1|  503|Drosophila melanogaster LD37690p
           protein.
          Length = 503

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 6/52 (11%)

Query: 36  PEDITMLID-TLQRTQ-LDAFRE----LLDSVRQSATPTFDHQISYLVPVTK 81
           P+ + ML +  L R + ++  RE    LLDS++Q+A  +    ++Y+ P+ +
Sbjct: 187 PDKVKMLENYVLDRVEKIEKLRETHLGLLDSIKQAARRSIQQLVTYVFPIAE 238


>AE014297-4320|AAF56856.1|  503|Drosophila melanogaster CG11877-PA
           protein.
          Length = 503

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 6/52 (11%)

Query: 36  PEDITMLID-TLQRTQ-LDAFRE----LLDSVRQSATPTFDHQISYLVPVTK 81
           P+ + ML +  L R + ++  RE    LLDS++Q+A  +    ++Y+ P+ +
Sbjct: 187 PDKVKMLENYVLDRVEKIEKLRETHLGLLDSIKQAARRSIQQLVTYVFPIAE 238


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.320    0.134    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,076,383
Number of Sequences: 52641
Number of extensions: 69352
Number of successful extensions: 186
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 186
Number of HSP's gapped (non-prelim): 2
length of query: 81
length of database: 24,830,863
effective HSP length: 61
effective length of query: 20
effective length of database: 21,619,762
effective search space: 432395240
effective search space used: 432395240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 53 (25.4 bits)