Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001206-TA|BGIBMGA001206-PA|IPR002423|Chaperonin
Cpn60/TCP-1, IPR012716|T-complex protein 1, beta subunit,
IPR008950|GroEL-like chaperone, ATPase, IPR002194|Chaperonin TCP-1,
IPR001844|Chaperonin Cpn60
(536 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 689 0.0
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 192 6e-49
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 158 9e-39
SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 1e-29
SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 3e-25
SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 2e-20
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3) 87 4e-17
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 2e-14
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 2e-14
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 1e-12
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05) 66 5e-11
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 66 9e-11
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 1e-10
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 2e-10
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 6e-09
SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1) 59 8e-09
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-08
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 53 5e-07
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 48 1e-05
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 45 1e-04
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 45 2e-04
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.14
SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.33
SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4) 33 0.44
SB_30399| Best HMM Match : ERM (HMM E-Value=0.37) 33 0.76
SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.1
SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 7.1
SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19) 29 9.4
SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14) 29 9.4
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 689 bits (1702), Expect = 0.0
Identities = 346/524 (66%), Positives = 401/524 (76%), Gaps = 3/524 (0%)
Query: 2 VSLNPIRILKNXXXXXXXXXXRMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVE 61
VSLNP+ IL R+SSF+GAIAIGDLVKSTLGPKGMDKIL S G+N G ++
Sbjct: 1 VSLNPVSILNQGAEEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQN-GNIQ 59
Query: 62 VTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLH 121
VTNDGATILKSIG+DNPAAKILV++SKVQD+EVGDGTTSVTV KL+ K+H
Sbjct: 60 VTNDGATILKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIH 119
Query: 122 PQTIIAGWRIASDAAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFT 181
PQTI+AGWR + AA++AL A+ DH + + R DL NIARTTLSSKIL H++HF
Sbjct: 120 PQTIVAGWRKSVKAAEKALEAAAVDHSSDPEK--FREDLMNIARTTLSSKILVQHRDHFA 177
Query: 182 KLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKVENANILIA 241
KLAVDAVLRLKGSG+L AIQIIK GG + +SFLDEGFLL+KK+GV+QPKK+ENA ILIA
Sbjct: 178 KLAVDAVLRLKGSGDLNAIQIIKKLGGGMVDSFLDEGFLLDKKIGVNQPKKIENAKILIA 237
Query: 242 NTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYP 301
NTPMD DKIKVFGS ++VDS AKIA+LE+AEK+KMK+KV I+ H N FINRQLIYNYP
Sbjct: 238 NTPMDADKIKVFGSRVRVDSTAKIADLEMAEKQKMKEKVEMIIKHDINCFINRQLIYNYP 297
Query: 302 EQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLI 361
EQLFADAGVMAIEHADFEG+ERL LVTGGEIVSTF PD VKLG CK IEEV+IG++ LI
Sbjct: 298 EQLFADAGVMAIEHADFEGVERLALVTGGEIVSTFGRPDLVKLGTCKKIEEVMIGEDKLI 357
Query: 362 RFSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICXXXXXXXXXXXX 421
FSG AL ACT+VIRGATQQ++DEAERSLHDALCVL T KE K +
Sbjct: 358 HFSGCALNEACTVVIRGATQQILDEAERSLHDALCVLNQTGKENKTVNGGGASEVLMAHA 417
Query: 422 XXXXXXXXXXXXXXXXXXXXXXXXXXPSAVADNAGYDSADLIARLRAHHSRGENTMGLDM 481
P+ +ADNAGYDSADL+A+LRA H++G+NT GL+M
Sbjct: 418 VSQLAAKTPGKEAAAMESFATALRQLPTIIADNAGYDSADLVAKLRAAHTQGKNTYGLNM 477
Query: 482 QNGTVGDMKKLGVTESYVVKRQVLLSAAEAAEMILRVDNILKAA 525
NGTVGDM+ LG+TESY VKRQVLLSAAEAAEMI+RVDNI+KAA
Sbjct: 478 VNGTVGDMRDLGITESYQVKRQVLLSAAEAAEMIVRVDNIVKAA 521
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 192 bits (468), Expect = 6e-49
Identities = 135/476 (28%), Positives = 231/476 (48%), Gaps = 20/476 (4%)
Query: 23 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKI 82
+ S + A A+ ++K++LGPKGMDK++VS G+V VTNDGATIL + VD+ AK+
Sbjct: 32 KQSHILAARAVASILKTSLGPKGMDKMMVS---PDGEVTVTNDGATILGMMEVDHQIAKL 88
Query: 83 LVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAE 142
+V++SK QD E+GDGTT V V +L++ +HP I G+ +A+ A + +
Sbjct: 89 MVELSKSQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHMDS 148
Query: 143 A--SFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRL----KGSGN 196
+F K+ E+ ++ A TTL SKI+S ++AVDAVL + + +
Sbjct: 149 IADNFPVDKDNKESLIQT-----AMTTLGSKIVSRCHRPLAEIAVDAVLSVADLERKDVD 203
Query: 197 LKAIQIIKISGGLLEESFLDEGFLLNKKVGVHQ-PKKVENANILIANTPMDTDKIKVFGS 255
+ I++ GG L+++ L +G +++K + Q PK V++A I I P + K K
Sbjct: 204 FELIKVEGKEGGKLDDTVLVKGVVVDKDMSHPQMPKVVKDAKIAILTCPFEPPKPKT-KH 262
Query: 256 TIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEH 315
+ V ++ +L+ E+EK + + ++ N+ I + + L + A+
Sbjct: 263 KLDVATVEDYKKLQEYEREKFTEMIKQVKDTGANLAICQWGFDDEANHLLLQNHLPAVRW 322
Query: 316 ADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIG--DESLIRFSGVALGSACT 373
IE + + TGG IV F KLG ++ E+ G + ++ A T
Sbjct: 323 VGGPEIELIAIATGGRIVPRFSELTSEKLGKAGIVRELSFGTTKDKMLVIEECHNSRAVT 382
Query: 374 IVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICXXXXXXXXXXXXXXXXXXXXXXXX 433
I IRG + ++ EA+RS+HDALCV+ V++ +V+
Sbjct: 383 IFIRGGNKMIVGEAKRSIHDALCVVRNLVRDSRVVYGGGATELSCSIAIAKEADKISTIE 442
Query: 434 XXXXXXXXXXXXXXPSAVADNAGYDSADLIARLRAHHSRGEN-TMGLD-MQNGTVG 487
P A+A+N+G + +A +++ +N +G+D M +G G
Sbjct: 443 QYAMRAYADALDNIPLALAENSGLNPIQTVADIKSRQVAEKNPRLGVDCMDSGING 498
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 158 bits (384), Expect = 9e-39
Identities = 82/133 (61%), Positives = 98/133 (73%), Gaps = 2/133 (1%)
Query: 86 MSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASDAAKQALAEASF 145
+SKVQD+EVGDGTTSVTV KL+ K+HPQTI+AGWR + AA++AL A+
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALEAAAV 61
Query: 146 DHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKI 205
DH + + R DL NIARTTLSSKIL H++HF KLAVDAVLRLKGSG+L AIQIIK
Sbjct: 62 DHSSDPEK--FRDDLMNIARTTLSSKILVQHRDHFAKLAVDAVLRLKGSGDLNAIQIIKK 119
Query: 206 SGGLLEESFLDEG 218
GG + +SFLDEG
Sbjct: 120 LGGGMVDSFLDEG 132
>SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 128 bits (309), Expect = 1e-29
Identities = 60/78 (76%), Positives = 72/78 (92%)
Query: 448 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDMKKLGVTESYVVKRQVLLS 507
P+ +ADNAGYDSADL+A+LRA H++G+NT GL+M NGTVGDM+ LG+TESY VKRQVLLS
Sbjct: 2 PTIIADNAGYDSADLVAKLRAAHTQGKNTYGLNMVNGTVGDMRDLGITESYQVKRQVLLS 61
Query: 508 AAEAAEMILRVDNILKAA 525
AAEAAEMI+RVDNI+KAA
Sbjct: 62 AAEAAEMIVRVDNIVKAA 79
>SB_54147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 113 bits (272), Expect = 3e-25
Identities = 51/73 (69%), Positives = 62/73 (84%)
Query: 221 LNKKVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKV 280
++KK+GV+QPKK+ENA ILIANTPMD DK+KVFGS ++VDS AKIAELE AEK+KMKDKV
Sbjct: 1 MDKKIGVNQPKKIENAKILIANTPMDADKVKVFGSRVRVDSTAKIAELEKAEKQKMKDKV 60
Query: 281 NKILAHKCNVFIN 293
I+ H N F+N
Sbjct: 61 EMIIKHGINCFVN 73
>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 97.9 bits (233), Expect = 2e-20
Identities = 53/214 (24%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 310 VMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGDESLIRFSGVAL- 368
++ + + + IE + G + +++ D + L +L+EEV +G +++ +GV+
Sbjct: 3 ILVVRDIERDEIEFICKSIGCKPIASLDHFNPDMLASAELVEEVSVGTSKVVKITGVSNP 62
Query: 369 GSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICXXXXXXXXXXXXXXXXXXX 428
G+ ++++RG+ + V++EA+RSLHDALCV+ VK+ +I
Sbjct: 63 GNTVSVLVRGSNKLVLEEADRSLHDALCVIRCLVKKRALIAGGGAPEIEVALRLAEYSQT 122
Query: 429 XXXXXXXXXXXXXXXXXXXPSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGD 488
P +A+NAG + + LR H++GE T G++++ GTV +
Sbjct: 123 LTSMDAYCVRAFAEALEIIPYTLAENAGLNPIATVTELRNRHAQGEVTAGINVRKGTVTN 182
Query: 489 MKKLGVTESYVVKRQVLLSAAEAAEMILRVDNIL 522
+ + V + +V + A+E IL++D+I+
Sbjct: 183 ILEENVLQPLLVSTSAVQLASETVRSILKIDDIV 216
>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
Length = 189
Score = 86.6 bits (205), Expect = 4e-17
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 370 SACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICXXXXXXXXXXXXXXXXXXXX 429
S+ +I++RGA ++DE ERS+HDA+CV+ ++ ++
Sbjct: 6 SSSSIILRGANDYMLDEMERSMHDAICVVKRVLESKTLVPGGGAVEAALSIYLENFATSL 65
Query: 430 XXXXXXXXXXXXXXXXXXPSAVADNAGYDSADLIARLRAHHSRGE--------NTMGLDM 481
P ++ NA DSADL+A+LRA H+ + +GLD+
Sbjct: 66 GSREQLAIAEFANSLLVIPKILSVNAAKDSADLVAKLRAFHNTSQINAERSHLKWIGLDL 125
Query: 482 QNGTVGDMKKLGVTESYVVKRQVLLSAAEAAEMILRVDNILK 523
GTV D KK GV E + K + L A EAA ILR+D+++K
Sbjct: 126 VEGTVRDNKKAGVFEPAICKIKSLKFATEAAITILRIDDMIK 167
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 77.8 bits (183), Expect = 2e-14
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 147 HQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKIS 206
H K + +R LE A T LSSK+++ KE F K+ VDAV+ L L I + K+S
Sbjct: 11 HVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLDELLPLDMIGMKKVS 70
Query: 207 GGLLEESFLDEGFLLNKKVGV----HQPKKVENANILIANTPMDTDKIKVFGSTIKVDSM 262
GG LE+S L EG K QPK + I + N ++ K + + +++D++
Sbjct: 71 GGALEDSMLIEGVAFKKTFSYAGFEMQPKTYNHCKIALLNVELEL-KAEKENAEVRLDNV 129
Query: 263 AKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFAD 307
+ AE + + DK++K++ V +++ I + Q FAD
Sbjct: 130 KDYQSIVDAEWDILYDKLDKVVKSGAKVVLSKLPIGDVATQYFAD 174
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 77.8 bits (183), Expect = 2e-14
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 62 VTNDGATILKSIGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLH 121
+TNDG IL+ I V +PAAK ++++S+ QDEEVGDGTTSV + +EQ++H
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 122 PQTIIAGWRIASD 134
P IIA +R+A D
Sbjct: 61 PTQIIAAYRLAMD 73
>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 72.1 bits (169), Expect = 1e-12
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 371 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICXXXXXXXXXXXXXXXXXXXXX 430
ACTI++RGA++ V++E ER+L DA+ V + +P+++
Sbjct: 160 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPGGGACEMALAHALTEKAKLVA 219
Query: 431 XXXXXXXXXXXXXXXXXPSAVADNAGYDSADLIARLRAHH-SRGENTMGLDMQNGTVGDM 489
P + N G ++ I LRA H + G + G+D ++G + DM
Sbjct: 220 GVQQWPYKAVAKGLEVIPRTLIQNCGANTIRTITALRAKHAAEGNTSWGIDGESGQIVDM 279
Query: 490 KKLGVTESYVVKRQVLLSAAEAAEMILRVDN 520
++LGV ++Y VK Q +A E + +L VD+
Sbjct: 280 QELGVWDTYAVKAQTFKTALE-KKSLLDVDH 309
>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
Length = 206
Score = 66.5 bits (155), Expect = 5e-11
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 3/163 (1%)
Query: 321 IERLGLVTGGEIVSTFDSPDKVKLGHCKLIEEVLIGD--ESLIRFSGVALGSACTIVIRG 378
IE + + TGG IV F KLG ++ E+ G + ++ A TI IRG
Sbjct: 43 IELIAIATGGRIVPRFSELTSEKLGKAGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRG 102
Query: 379 ATQQVIDEAERSLHDALCVLAATVKEPKVICXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 438
+ ++ EA+RS+HDALCV+ V++ +V+
Sbjct: 103 GNKMIVGEAKRSIHDALCVVRNLVRDSRVVYGGGATELSCSIAIAKEADKIATIEQYAMR 162
Query: 439 XXXXXXXXXPSAVADNAGYDSADLIARLRAHHSRGENT-MGLD 480
P A+A+N+G + +A +++ +N +G+D
Sbjct: 163 AYADALDNIPLALAENSGLNPIQTVADIKSRQVAEKNPGLGVD 205
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 65.7 bits (153), Expect = 9e-11
Identities = 32/61 (52%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 33 IGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDE 92
I D V++TLGP+GMDK++V GR G+ ++NDGATI+ + + +PAAK LVD++K QD
Sbjct: 667 IADAVRTTLGPRGMDKLIVD-GR--GKATISNDGATIINLLDIVHPAAKTLVDIAKSQDA 723
Query: 93 E 93
E
Sbjct: 724 E 724
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 65.3 bits (152), Expect = 1e-10
Identities = 50/246 (20%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 165 RTTLSSK-ILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIKISGGLLEESFLDEGFLLNK 223
+T +SSK I S ++ + + ++L K + N+ +++ KI G + S + +G + K
Sbjct: 20 KTAVSSKQIRSIKNDNNMRFSSVSILPEKATFNVDNVRVAKILGSGIHNSEVVQGMVFKK 79
Query: 224 KVGVHQPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKI 283
V K ++ I + + P+D + + G T+ + + ++ E++ ++ ++ I
Sbjct: 80 GVEGDITSK-KDCKIAVFSCPLDLMQTETKG-TVLIKNAEELKSFSKGEEDLLEMQIKSI 137
Query: 284 LAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVK 343
+V ++ + + +M + + RL + +P
Sbjct: 138 KEKGADVIVSGGKVADMALHFCNKYQIMVVRLTSKWDLRRLCRAISATALPKVTTPTTED 197
Query: 344 LGHCKLIEEVLIGDESLIRFSGVALGSA-CTIVIRGATQQVIDEAERSLHDALCVLAATV 402
LGHC L+ IG+ + F +A T+VIRG+T+ ++D+ ER++ D + A
Sbjct: 198 LGHCDLVYLSEIGETPVTIFKQEREETAVATVVIRGSTENIMDDIERAIDDGVNSFKALT 257
Query: 403 KEPKVI 408
++P+ +
Sbjct: 258 RDPRFV 263
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 64.9 bits (151), Expect = 2e-10
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 73 IGVDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIA 132
I V +PAAK ++++S+ QDEEVGDGTTSV + +EQ++HP IIA +R+A
Sbjct: 209 IQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQIIAAYRLA 268
Query: 133 SD 134
D
Sbjct: 269 MD 270
>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 59.7 bits (138), Expect = 6e-09
Identities = 28/108 (25%), Positives = 46/108 (42%)
Query: 363 FSGVALGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVICXXXXXXXXXXXXX 422
FSG + CTI++RG +Q ++E ERSLHDA+ ++ +K V+
Sbjct: 5 FSGCKQSTTCTIIMRGGAEQFMEETERSLHDAIMIVRRAMKNDAVVAGGGAIEMELSKYL 64
Query: 423 XXXXXXXXXXXXXXXXXXXXXXXXXPSAVADNAGYDSADLIARLRAHH 470
P + DNAG+D+ +++ +LR H
Sbjct: 65 RDYSRTIAGKEQLLIGAMAKAFEIIPRQLCDNAGFDATNILNKLRQKH 112
>SB_30876| Best HMM Match : Ribosomal_S16 (HMM E-Value=7.1)
Length = 131
Score = 59.3 bits (137), Expect = 8e-09
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 9/110 (8%)
Query: 164 ARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGN-------LKAIQIIKISGGLLEESFLD 216
A T LSSK++ + F + VDAV+ +K +GN +KAI ++K GG +ES L
Sbjct: 17 ANTALSSKLIGQQGDFFANMIVDAVMAVKRTGNKGEAKYPIKAINVLKAHGGSAKESILV 76
Query: 217 EGFLLNKKVGVH-QPKKVENANILIANTPMDTDKIKVFGSTIKVDSMAKI 265
+G+ LN + PK+V NA I + + K+ + G ++ VD K+
Sbjct: 77 DGYALNCTIASQAMPKQVTNAKIACLDFTLQKAKMHL-GVSVVVDDPEKL 125
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 58.0 bits (134), Expect = 2e-08
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Query: 75 VDNPAAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTIIAGWRIASD 134
+ +P A ++ ++ QD+ GDGTTS + + + LHP+ + G+ +A
Sbjct: 171 IQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAKK 230
Query: 135 AAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLK 192
A + L E + + R L N+A+T+L +K+ + + T++ VDAVL ++
Sbjct: 231 KALEVLEEVKVSREMD------RDTLINVAKTSLRTKVRTELADLLTEVVVDAVLTIR 282
Score = 39.5 bits (88), Expect = 0.007
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 448 PSAVADNAGYDSADLIARLRAHHSRGENTMGLDMQNGTVGDMKKLGVTESYVVKRQVLLS 507
P +A N+G+D + + +L ++ +G+D+ +G GV ++Y VKRQ+L S
Sbjct: 370 PKTLAQNSGFDPQETMVKLLEEYADSNTPVGVDLSSGEAMIPADAGVWDNYRVKRQLLHS 429
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 53.2 bits (122), Expect = 5e-07
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 23 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGV----DNP 78
R + G + D V TLGPKG + I+ ++ G ++T DG T+ K+I + N
Sbjct: 69 RAAMLQGVDTLADAVAVTLGPKGKNVIIE---QSFGGPKITKDGVTVAKAIELKDKYQNI 125
Query: 79 AAKILVDMSKVQDEEVGDGTTSVTVXXXXXXXXXXKLIEQKLHPQTI 125
A+++ D++ +EE GDGTT+ TV + + +PQ +
Sbjct: 126 GARLVQDVANNTNEEAGDGTTTATVLARSIATEGFLHVSKGANPQEV 172
Score = 33.1 bits (72), Expect = 0.58
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 474 ENTMGLDMQNGTVGDMKKLGVTESYVVKRQVLLSAAEAAEMILRVDNILKAA 525
EN MG D N T DM + G+ + V R + AA A ++ + ++ A
Sbjct: 176 ENAMGYDAANNTYVDMIQAGIIDPTKVVRTAITDAAGVASLLTTAETVIVEA 227
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 48.4 bits (110), Expect = 1e-05
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 23 RMSSFIGAIAIGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATI 69
RM++ A A+ D ++++LGPKGMDK++ +G V +TNDGATI
Sbjct: 26 RMTNITAAKAVADAIRTSLGPKGMDKMIQG---GNGDVTITNDGATI 69
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 45.2 bits (102), Expect = 1e-04
Identities = 40/196 (20%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 200 IQIIKISGGLLEESFLDEGFLLNKKVGVHQPKKV-ENANILIANTPMDTDKIKVFGSTIK 258
++ KI GG +E L G + K V + V N IL+ +D + +
Sbjct: 570 VKFKKIPGGSRDECKLISGVVFTKNVSHKKMSCVFNNPQILVLCCAIDYQRNE------- 622
Query: 259 VDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADF 318
+ +A + L + E+ +K+ V+++ A + NV + + + +++ G+ +
Sbjct: 623 -NRLASLDPLVLQERNFLKNFVSRVAALRPNVLLVEKTVSRLAQEMLLQHGISLALNVKP 681
Query: 319 EGIERLGLVTGGEIVSTFDSPDKVKLGHCKLIE----EVLIGD-ESLIRFSGVALGSACT 373
IER+ T E + + + + +LG C+L ++ G+ ++L+ G CT
Sbjct: 682 AVIERVSRCTKAETLRSMEQLSRPRLGSCQLFRVQNFKLKNGETKTLMYLEGCPTELGCT 741
Query: 374 IVIRGATQQVIDEAER 389
+ +RG V+ + ++
Sbjct: 742 VTLRGGNSFVLTKIKK 757
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 44.8 bits (101), Expect = 2e-04
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 36 LVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIGVDNPAAKILVDMSKVQDEEVG 95
++K + GP G+D +L S +SG + +TN G+ IL+S+ + NP +++V+ ++ G
Sbjct: 15 ILKKSFGPNGLDVMLRS---SSGNILITNSGSMILESLTMGNPTERMIVEAARSLSGRTG 71
Query: 96 DGTT 99
G +
Sbjct: 72 SGAS 75
>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 41.9 bits (94), Expect = 0.001
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 371 ACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVI 408
ACTI++RGA++ V++E ER+L DA+ V + +P+++
Sbjct: 217 ACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLV 254
>SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 35.1 bits (77), Expect = 0.14
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 448 PSAVADNAGYDSADLIARLRAHHSRGENTMGLD 480
P A+ADNAG + +LI++L A H G+ G D
Sbjct: 21 PRALADNAGVKATELISKLYAAHQEGKMNAGFD 53
>SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 33.9 bits (74), Expect = 0.33
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 302 EQLFADAGVMAIEHADFEGIERLGLVTGGEIVSTF--DSPDKVKLGHCKLIEEVLIGDES 359
++ D V + I + +TG ++STF D P+ G IE +I ++S
Sbjct: 22 KRFLKDRKVYVFDRLSVMHINAVQRLTGATLLSTFTTDIPEHW-YGQLDSIEYTVIANKS 80
Query: 360 LIRFSGVA-LGSACTIVIRGATQQVIDEAERSLHDALCVLAATVKEPKVI 408
+ + S CT+++ + ++E + A+ VLA V P V+
Sbjct: 81 YLHLIPTQPMTSVCTVILCSPDESSLEELLSTCQSAMSVLAQVVAYPWVV 130
>SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4)
Length = 101
Score = 33.5 bits (73), Expect = 0.44
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 272 EKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLFADAGVMAIEHADFEGIERLGLVTGGE 331
E + K+++ KILA NV ++ I + + F + G MA+ ++R+ TG
Sbjct: 2 ESDITKERIQKILASGANVVLSTGGIDDLCLKYFVECGAMAVRRVKKGDLKRIARSTGAT 61
Query: 332 IVSTF------DSPDKVKLGHCKLIEEVLIGDESLI 361
+V + +S D LG + + + I D+ LI
Sbjct: 62 MVLSLANLEGEESFDASMLGQAEEVCQQRICDDELI 97
>SB_30399| Best HMM Match : ERM (HMM E-Value=0.37)
Length = 562
Score = 32.7 bits (71), Expect = 0.76
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Query: 249 KIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQ-LIYNYPEQLFAD 307
KI+ F + +VD + + + + E E +VNK++ I R+ L ++P+ + A
Sbjct: 254 KIETFYTQTRVDQLERKIKAKRQENESSAAEVNKLVDQLQRAVIARKPLKADFPKGILAS 313
Query: 308 AGVMAIEHADFEGIERLGLVTGGEIVSTFDSPDKVKL 344
+EH G T G++ + DSP + L
Sbjct: 314 HVKQVLEHHLVNEASGKGGFTTGKVSISVDSPTDLYL 350
>SB_59319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 28
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 252 VFGSTIKVDSMAKIAELEVAEKEKMKDK 279
VFGS ++VDS AKIA +E +K K K
Sbjct: 1 VFGSRVRVDSTAKIAGVESRKKWKRTPK 28
>SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 638
Score = 29.5 bits (63), Expect = 7.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 33 IGDLVKSTLGPKGMDKILVSCGRNSGQVEVTNDGATILKSIG 74
I +++ PK +D+IL CG +SG ++ D +I S G
Sbjct: 346 INEIIAKFEQPKSLDEIL-ECGMDSGMPDLREDAVSIANSRG 386
>SB_50789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 777
Score = 29.5 bits (63), Expect = 7.1
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 145 FDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGSGNLKAIQIIK 204
F Q LN A L V L+NIAR + +I + +E F + D +L ++ S + + ++ +
Sbjct: 68 FFMQAQLNIACLVVMLDNIARN--NRRIRKSGREEFLRKEEDNLLGIRSSESSRIKRVTR 125
Query: 205 ISG 207
SG
Sbjct: 126 NSG 128
>SB_57181| Best HMM Match : bZIP_1 (HMM E-Value=0.19)
Length = 104
Score = 29.1 bits (62), Expect = 9.4
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 246 DTDKIKVFGSTIKVDSMAKIAELEVAEKEKMKDKVNKILAHKCNVFINRQLIYNYPEQLF 305
+T+KI+ +V +IAEL+V EK++ + N+ L + V Y ++
Sbjct: 26 ETEKIRREYEVFRVSKQTEIAELQVL-NEKLQSE-NRRLRGESKVLQATCQKLRYEREMA 83
Query: 306 ADAGVMAIEH-ADFE-GIERL 324
DAG A++ A FE G+ R+
Sbjct: 84 LDAGDQALQRAATFEKGLNRI 104
>SB_49419| Best HMM Match : SCP (HMM E-Value=5e-14)
Length = 555
Score = 29.1 bits (62), Expect = 9.4
Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 135 AAKQALAEASFDHQKNLNEASLRVDLENIARTTLSSKILSNHKEHFTKLAVDAVLRLKGS 194
A ++A A + + ++N AS+++ + +IA +S +++ FT + LR+ S
Sbjct: 260 AGEEAKALITLSDESSVNLASMKIHVMSIAGAVISMATVTDRVARFTPPSEKFYLRMTIS 319
Query: 195 GNLKAIQIIKISGGLLEES 213
++I+++S L +S
Sbjct: 320 -TTSGVEIVRLSKDLEAQS 337
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,293,305
Number of Sequences: 59808
Number of extensions: 470277
Number of successful extensions: 1155
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1102
Number of HSP's gapped (non-prelim): 35
length of query: 536
length of database: 16,821,457
effective HSP length: 86
effective length of query: 450
effective length of database: 11,677,969
effective search space: 5255086050
effective search space used: 5255086050
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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