Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001205-TA|BGIBMGA001205-PA|IPR002110|Ankyrin,
IPR001660|Sterile alpha motif SAM, IPR010993|Sterile alpha motif
homology
         (361 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   1.1  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   1.1  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   7.9  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   7.9  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 251 NHQLTSWQDYYPGIEKNERPNYKNEIQNLLYGMSCERLTPLIV 293
           +H   +W  Y   +  N  P Y +E+  LL+GM      PL V
Sbjct: 194 SHPNITW--YQQCVTYNVFPTYAHELTYLLFGMVMMYALPLAV 234


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 251 NHQLTSWQDYYPGIEKNERPNYKNEIQNLLYGMSCERLTPLIV 293
           +H   +W  Y   +  N  P Y +E+  LL+GM      PL V
Sbjct: 194 SHPNITW--YQQCVTYNVFPTYAHELTYLLFGMVMMYALPLAV 234


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 8/28 (28%), Positives = 17/28 (60%)

Query: 299 LRTFLLLDAEEMVKLGIEMPYERHRLKY 326
           ++TF+L+    ++ L +  P E++  KY
Sbjct: 1   MKTFVLVAFAAVLGLALARPQEKYTTKY 28


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 9/35 (25%), Positives = 16/35 (45%)

Query: 188 VHHNQPEILEMLIEKGARLTEVDKSNRTLLEIANC 222
           +H    ++ E  ++KG    E+    +    IANC
Sbjct: 16  IHEEVAQVWEQTLQKGLDTEEIKDLLQKYPPIANC 50


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,141
Number of Sequences: 317
Number of extensions: 3880
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 361
length of database: 114,650
effective HSP length: 58
effective length of query: 303
effective length of database: 96,264
effective search space: 29167992
effective search space used: 29167992
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)