Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001205-TA|BGIBMGA001205-PA|IPR002110|Ankyrin,
IPR001660|Sterile alpha motif SAM, IPR010993|Sterile alpha motif
homology
(361 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 67 3e-12
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 54 2e-08
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 40 4e-04
SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase G... 40 4e-04
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 38 0.003
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 33 0.047
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 33 0.083
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 30 0.44
SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces pombe... 29 1.3
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 29 1.3
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 4.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 5.4
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 27 5.4
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 27 5.4
SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation protein... 26 7.2
SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit Cdc21... 26 7.2
SPBC31F10.10c |||zf-MYND type zinc finger protein|Schizosaccharo... 26 9.5
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 26 9.5
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 67.3 bits (157), Expect = 3e-12
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 72 KLDSGWTPLMHACFHAQ--DKIVQYLLEK-DADPNLHSDSVTPIMAACSNSSADNDTIYS 128
K ++GWTPLM + + D +++ L+ + D DP + T C + +A + S
Sbjct: 67 KDEAGWTPLMISINNRSVPDNVIEELINRSDVDPTI----TTRGGQTCLHYAAGKGRL-S 121
Query: 129 IVCNLIDRNC-ILNIGDRYGQTPLMRAISSGRVAVAQKLLDMQVNIEMRDQHGWTAVFWA 187
IV L D+ ++ D GQTPL RA + G++ V + L+ + + D +G+T + +A
Sbjct: 122 IVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFA 181
Query: 188 VHHNQPEILEMLIEKGARLTEVDKSNRTLLEIANCHDHQVIIEILK--KSLNLD 239
+ P++ L+ GA D N T LE+ C D V E L+ K NL+
Sbjct: 182 LAEGHPDVGVELVRAGADTLRKDSENHTALEV--CPDRIVCNEFLEACKEQNLE 233
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 54.4 bits (125), Expect = 2e-08
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 48 AIINGNMKDVEDLINNELKNNANIKLDSGWTPLMHACFHAQDKIVQYLLEKDADPNLHSD 107
A G + V++LI++E K + N + G T L A + Q I ++LLE AD N
Sbjct: 7 AASQGELDTVKNLISSE-KIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVNAIGG 65
Query: 108 SVTPIMAACSNSSADNDTIYSIVCNLIDRNCILNIGDRYGQTPLMRAISSGRVAVAQKLL 167
+ AA + +A ++ + V L+ + D+ G L A+ + + LL
Sbjct: 66 D---LQAAPIHWAAKRGSVKT-VHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVVYLL 121
Query: 168 DMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKGARLTEVDKSNRTLL 217
+ +++++RD T + WA +H I L+ GA + D+ T L
Sbjct: 122 HLDISVDLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPL 171
Score = 35.1 bits (77), Expect = 0.016
Identities = 34/160 (21%), Positives = 68/160 (42%), Gaps = 6/160 (3%)
Query: 44 ALQEAIINGNMKDVEDLINNELKNNANIKLDSGWTPLMHACFHAQDKIVQYLLEKDADPN 103
AL A +N + + L+ + NA I D P+ A K V YL++ ADP
Sbjct: 37 ALHWAALNQQIPICKFLLEHGADVNA-IGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPL 95
Query: 104 LHSDSVTPIMAACSNSSADNDTIYSIVCNLIDRNCILNIGDRYGQTPLMRAISSGRVAVA 163
L + ++++ +Y L+ + +++ D TPLM A G +
Sbjct: 96 LKDKQGFNCLHLAVHAASPLLVVY-----LLHLDISVDLRDDQQHTPLMWASYHGNEPIT 150
Query: 164 QKLLDMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKG 203
LL ++ D+ T + W++ + +++++++G
Sbjct: 151 NCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLILKEG 190
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 40.3 bits (90), Expect = 4e-04
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 154 AISSGRVAVAQKLLDMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKGARLTEVDKSN 213
A S G+ V K LD ++ D++G+T + AV + ++L++L+E+G + D+
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDG 70
Query: 214 RTLLEIANCHDHQVIIEILKKSLNLDDDHKTDE 246
T L + C ++ +++ + N D K ++
Sbjct: 71 ETPLFV--CEKLEIAHDLINQ-YNADTTVKNND 100
Score = 34.7 bits (76), Expect = 0.021
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 121 ADNDTIYSIVCNLIDRNCILNIGDRYGQTPLMRAISSGRVAVAQKLLDMQVNIEMRDQHG 180
A +D +V +D N D G TP+ A+S G + + L++ +I +RDQ G
Sbjct: 11 AASDGKTDVVLKHLDSGISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDINIRDQDG 70
Query: 181 WTAVF 185
T +F
Sbjct: 71 ETPLF 75
>SPAPB1E7.05 |gde1||glycerophosphoryl diester phosphodiesterase
Gde1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1076
Score = 40.3 bits (90), Expect = 4e-04
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Query: 144 DRYGQTPLMRAISSGRVAVAQKLLDMQVNIEMRD-QHGWTAVFWAVHHNQPEILEMLIEK 202
D T L A+ R + LL + N RD + WT + A EI+ +L+
Sbjct: 364 DASSNTALHTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLMLASATGLSEIVSILVAS 423
Query: 203 GARLTEVDKSNRTLLEIANCHDHQVIIEILKKSLNLDD 240
GA + EVD S T +E A + + + L+ + L D
Sbjct: 424 GASVDEVDSSGWTAMEQAVVRGYLHLADKLRTQVALSD 461
Score = 31.1 bits (67), Expect = 0.25
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 162 VAQKLLDMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKGARLTEVDKSNR-TLLEIA 220
+ ++L+ N D TA+ AV +N+PE ++ML++ GA + D N T L +A
Sbjct: 349 IVEELILAGFNPNEVDASSNTALHTAVRYNRPECVKMLLKLGANPSARDFLNSWTPLMLA 408
Query: 221 NCHDHQVIIEILKKS 235
+ I+ IL S
Sbjct: 409 SATGLSEIVSILVAS 423
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 37.5 bits (83), Expect = 0.003
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 144 DRYGQTPLMRAISSGRVAVAQKL---LDMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLI 200
D G + L A ++G +AV QK+ L+ +V I +++ G TA+ WA + EI ++L+
Sbjct: 33 DENGNSGLHMASANGHIAVVQKIIPYLNKEV-INAQNESGNTAMHWAALNGHAEICKLLL 91
Query: 201 EKG 203
E G
Sbjct: 92 EAG 94
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 45 LQEAIINGNMKDVEDLINNELKNNANIKLDSGWTPLMHACFHAQDKIVQYLLEKDADPNL 104
L A NG++ V+ +I K N + +SG T + A + +I + LLE DP++
Sbjct: 40 LHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAALNGHAEICKLLLEAGGDPHI 99
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 33.5 bits (73), Expect = 0.047
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 140 LNIGDRYGQTPLMRAISSGRVAVAQKLLDMQ-VNIEMRDQH-GWTAVFWAVHHNQPEILE 197
+N DRYG+T L A+S + + + LL + +++ ++D+ G+TA+ A++ E
Sbjct: 45 INQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALHRAIYVGNLEAAS 104
Query: 198 MLIEK 202
+L+ K
Sbjct: 105 LLLSK 109
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 32.7 bits (71), Expect = 0.083
Identities = 35/190 (18%), Positives = 81/190 (42%), Gaps = 13/190 (6%)
Query: 43 VALQEAIINGNMKDVEDLINNELKN--NANIKLDSGWTPLMHACFHAQDKIVQYLLEKDA 100
+ L + +++ D I N +K N+ K S T L + + ++ +++KD+
Sbjct: 767 LTLSKKLLSSWRDDFAQYITNSIKQPPNSESKGQSKKTLLHDSNMESLKSVISRIVKKDS 826
Query: 101 DPNLHSDSVTPIMAACSNSSADNDTIYSIVCNLIDRNCILNIGDRYGQTPLMRAISSGRV 160
N DSV + A D T Y +L++ + G++ L + G
Sbjct: 827 --NQSDDSVESTILAAFALVTDTTTPYLSDFSLVNES---------GRSLLHLTAACGLS 875
Query: 161 AVAQKLLDMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKGARLTEVDKSNRTLLEIA 220
+ L + ++ RD G+T + +A ++ +I L+ GA+ + S + ++++
Sbjct: 876 NASTFLCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSNGAKPDVIGASGKKPIDLS 935
Query: 221 NCHDHQVIIE 230
+ +++ +
Sbjct: 936 SSEPIKLVFK 945
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 30.3 bits (65), Expect = 0.44
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 23 EKPVRNYDYSSQISSKKKVEVALQEAIINGNMKDVEDLI----NNELKNN-----ANIKL 73
EK +R + KKK+ + I N ++E + +N+L N N+ L
Sbjct: 372 EKEIRQSRLQEEERKKKKLAKYTEVIISNLKASNIEAFLEYLRSNDLSINFQFYPKNVHL 431
Query: 74 DSGWTPLMHACFHAQDKIVQYLLEKDADP-NLHSDSVTPIMAACSNSSADND 124
+ TPL +A K+V LL ADP L+ + TP + N ++
Sbjct: 432 HTS-TPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEISTGNKEVKDE 482
>SPCC1672.01 |||histidinol-phosphatase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 306
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 186 WAVHHNQPEILEMLIEKGARLTEVDKSN 213
W + Q +LE+++E+GA+LT D S+
Sbjct: 220 WKTAYPQQRLLELMVEQGAQLTLSDDSH 247
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 28.7 bits (61), Expect = 1.3
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 30 DYSS-QISSKKKVEVALQEAIINGNMKDVEDLINNELKNNANIKLDSGWTPLMHACFHAQ 88
DY + S +++ +A IN N E L +N+ NN S P + H Q
Sbjct: 2 DYKKGEHSPSSSIQILSDDATINSNYAYGEQLQSNDQYNNIQHPAPSFANPFI----HEQ 57
Query: 89 DKIVQYLLEKDADPNLHSDSVTP 111
D +LE++ D + + P
Sbjct: 58 DDSYSDILEEEPDEDAYDSPERP 80
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.1 bits (57), Expect = 4.1
Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 131 CNLIDRNCILNIGDRYGQTPLMRAISSGRVAVAQKLLDMQVNIEMRDQHGWTAVFWAVHH 190
C+ D C + D + P + + SG +A + + ++ +++ + A +
Sbjct: 612 CSGRDDLCWTILNDAWVSFPTLASEDSGFIAHRKNQFEENLHKLEEERYEYDRHIGA-NM 670
Query: 191 NQPEILEMLIEKGARLTEVDKSNRTLLEIANCHDHQVIIEILKKSLNLDDDHKTDENSYL 250
E+L++ +K +++EV+K+N TL + +++KK + + EN
Sbjct: 671 RFIELLQIHADKMLKMSEVEKANWTLPSNLGGKSVSIYHKVIKKVYGKEHAQQIIENLQK 730
Query: 251 NHQLT 255
N +T
Sbjct: 731 NPSVT 735
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 221 NCHDHQVIIEILKKSLNLDDDHKTDENSYLNHQLTS--WQDYYPGIEKNERPN 271
NC + ++K +NL + + L LT+ W+D +P + + PN
Sbjct: 1157 NCWPRDARMRLMKHDVNLGRAVFWEIRNRLPRSLTTLEWEDTFPSVYSKDNPN 1209
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 26.6 bits (56), Expect = 5.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 154 AISSGRVAVAQKLLDMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKGARLTEVDKSN 213
A SS A LD+ V I D+ G A+ WA + +L+ LI KGA + +
Sbjct: 334 ADSSALEAKLSDSLDLDVPI---DELGHAALHWAAAVAKMPLLQALIHKGANPLRGNLTG 390
Query: 214 RTLL 217
T L
Sbjct: 391 ETAL 394
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 168 DMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKGARLTEVDKSNRTLLEIANC 222
+ Q E ++ H +VF + E +G RL E NR+LL + NC
Sbjct: 272 EKQEESESQNSHKVRSVFSFIDLAGSERASATKNRGKRLVEGANINRSLLALGNC 326
>SPAC4F8.03 ||SPAC644.01c|SBDS family ribosome maturation
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 49 IINGNMKDVEDLINNELKNNANIKL 73
+I GN K +++L+ NE KN +++
Sbjct: 214 VIPGNYKLIDELVRNETKNRGMVQV 238
>SPCC16A11.17 |cdc21|mcm4, SPCC24B10.01|MCM complex subunit
Cdc21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 911
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 247 NSYLNHQLTSWQDYYPGIEKNERPNYKNEI 276
N + + S++ + G +K RP Y+NE+
Sbjct: 163 NVSIQESIASFRGFLRGFKKKYRPEYRNEL 192
>SPBC31F10.10c |||zf-MYND type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 9.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 138 CILNIGDRYGQTPLMRAISSGRVAVAQKLLD 168
C++N+G R + +R + +G V + LLD
Sbjct: 90 CVVNVGIRGSEAIRIRVVEAGIVPIVVTLLD 120
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 224 DHQVIIEILKKSLNLDD-DHKTDENSYLNHQLTSWQDY 260
DH I K+ L + + K ++SY N +L W+DY
Sbjct: 113 DHYRAIISSKRELRAQEMEAKRKQDSYNNPELKFWEDY 150
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,797,390
Number of Sequences: 5004
Number of extensions: 80073
Number of successful extensions: 276
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 247
Number of HSP's gapped (non-prelim): 26
length of query: 361
length of database: 2,362,478
effective HSP length: 74
effective length of query: 287
effective length of database: 1,992,182
effective search space: 571756234
effective search space used: 571756234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -