Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001203-TA|BGIBMGA001203-PA|undefined
(141 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4C4J8 Cluster: Putative uncharacterized protein; n=1; ... 33 2.9
UniRef50_Q7S6G0 Cluster: Putative uncharacterized protein NCU070... 32 3.9
UniRef50_Q8YRW1 Cluster: ATP-dependent helicase; n=5; cellular o... 32 5.1
UniRef50_Q6D8I4 Cluster: Prepilin peptidase dependent protein B;... 32 5.1
UniRef50_Q3YA42 Cluster: Glycyl-tRNA synthetase beta chain; n=1;... 32 5.1
UniRef50_UPI00005F861B Cluster: hypothetical protein YmolA_01002... 31 6.8
UniRef50_Q9HZA8 Cluster: Folylpolyglutamate synthetase; n=18; Ps... 31 6.8
UniRef50_A6QRU7 Cluster: Putative uncharacterized protein; n=1; ... 31 6.8
UniRef50_Q6N5H3 Cluster: Sensor protein; n=16; Alphaproteobacter... 31 8.9
UniRef50_Q3WJC2 Cluster: TPR repeat precursor; n=1; Frankia sp. ... 31 8.9
UniRef50_Q0EUF7 Cluster: ABC transporter related; n=2; Thermoana... 31 8.9
UniRef50_Q7QUT6 Cluster: GLP_231_11923_13749; n=1; Giardia lambl... 31 8.9
UniRef50_Q4PES1 Cluster: Predicted protein; n=2; Ustilago maydis... 31 8.9
>UniRef50_A4C4J8 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 1013
Score = 32.7 bits (71), Expect = 2.9
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 72 NNVAVETTGVWSSEAKKFIAAIGHRLRGQGHDPRSGSYLVQRLSIAIQRGNAASVMGTFG 131
NNV + TG WS +A K + A + G ++P + + + +A +A S+ G
Sbjct: 649 NNVKISRTGQWSQDAAKLVGAENSVVFGLEYEPEYTNDYILYVGLASTASDAQSIWQVDG 708
Query: 132 PG 133
G
Sbjct: 709 LG 710
>UniRef50_Q7S6G0 Cluster: Putative uncharacterized protein
NCU07063.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU07063.1 - Neurospora crassa
Length = 551
Score = 32.3 bits (70), Expect = 3.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 74 VAVETTGVWSSEAKKFIAAIGHRLRGQGHDPRSGSYLVQRLSIAIQRGNAASVMGTFG 131
V +++ G S + AIG G +DP SG Y+V ++A Q G+ + G+ G
Sbjct: 307 VFLDSGGTLSRLPETIFQAIGDSFPGSQYDPESGFYIVD-CAVAEQAGSVDFIFGSSG 363
>UniRef50_Q8YRW1 Cluster: ATP-dependent helicase; n=5; cellular
organisms|Rep: ATP-dependent helicase - Anabaena sp.
(strain PCC 7120)
Length = 722
Score = 31.9 bits (69), Expect = 5.1
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 17 CAVTADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMDGCIN--NNV 74
C + A+ +QT+S+I +L +AS + P + H+ G+ ++ LR + + + +N
Sbjct: 258 CLIFANNRTQTESIIASLRQIAS-QQAHPDIYHVHHGS---ISASLRQVAENAMREPHNP 313
Query: 75 AVETTGVWSSEAKKFIAAIGHRLRG-QGHDPRSGSYLVQRLSIAIQRGNAASV 126
AV T + E IGH R Q P S + +QRL A +RG AA +
Sbjct: 314 AV-TAATLTLELG---IDIGHLERVIQLEAPLSVASFLQRLGRAGRRGEAADM 362
>UniRef50_Q6D8I4 Cluster: Prepilin peptidase dependent protein B;
n=2; Enterobacteriaceae|Rep: Prepilin peptidase
dependent protein B - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 203
Score = 31.9 bits (69), Expect = 5.1
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 67 DGCINNNVAVETTGVWSSEAKKFIAAIGHRLRGQGHDPRSGSYLVQ 112
+ C+N + + GVW ++ + G+RLRG+ + +SG++ Q
Sbjct: 99 NSCLNVSYDLNRNGVWDGGEQQDAESFGYRLRGRSLEIQSGAHNCQ 144
>UniRef50_Q3YA42 Cluster: Glycyl-tRNA synthetase beta chain; n=1;
Acidithiobacillus ferrooxidans|Rep: Glycyl-tRNA
synthetase beta chain - Thiobacillus ferrooxidans
(Acidithiobacillus ferrooxidans)
Length = 694
Score = 31.9 bits (69), Expect = 5.1
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 19 VTADAHSQTQSVIHTLDDLASY--KNKIPVLKHIPKGARNLVAGKLRVIMDGCINNNV 74
+ ADAH Q ++ LD L + K+P P R G LR+++D + N+
Sbjct: 443 IPADAHGQCLAIADKLDTLCGFFAIGKVPTGDRDPFALRRAALGVLRIVLDAGVPLNL 500
>UniRef50_UPI00005F861B Cluster: hypothetical protein
YmolA_01002282; n=1; Yersinia mollaretii ATCC 43969|Rep:
hypothetical protein YmolA_01002282 - Yersinia
mollaretii ATCC 43969
Length = 626
Score = 31.5 bits (68), Expect = 6.8
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 47 LKHIPKGARNLVAGKLRVIMDGCINNNVAVETTGVWSSEAKKFIAAIGHRLRGQ 100
L H P+ +NL GK+ VI+D IN +E W SE K +AA+ + Q
Sbjct: 309 LSHQPEAIKNLAGGKVAVILD-TIN---MLENIVQWMSEQKLDLAALNAMITPQ 358
>UniRef50_Q9HZA8 Cluster: Folylpolyglutamate synthetase; n=18;
Pseudomonadaceae|Rep: Folylpolyglutamate synthetase -
Pseudomonas aeruginosa
Length = 429
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 101 GHDPRSGSYLVQRLSIAIQRGNAASVMG 128
GH+P++ YL QRL A RG +V G
Sbjct: 307 GHNPQAAQYLAQRLRAAAPRGRYLAVFG 334
>UniRef50_A6QRU7 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 2616
Score = 31.5 bits (68), Expect = 6.8
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 47 LKHIPKGARNLVAGKLRVIMDGCINNNV----AVETTGVWSSEAKKFIAAIGHRLRGQGH 102
LKH G+ + V+ G + ++V A +GV K F HR G
Sbjct: 145 LKHKSTGSEQSIISNRAVVTGGSVISHVGDIIAFSHSGVLGPSGKCF--TFDHRAEGYAR 202
Query: 103 DPRSGSYLVQRLSIAIQRGNA--ASVMGT 129
G+ +V++LS A++ GN A + GT
Sbjct: 203 GEGVGTIIVKKLSDALKDGNTIRAVIRGT 231
>UniRef50_Q6N5H3 Cluster: Sensor protein; n=16;
Alphaproteobacteria|Rep: Sensor protein -
Rhodopseudomonas palustris
Length = 907
Score = 31.1 bits (67), Expect = 8.9
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 79 TGVWSSEAKKFIAAIGHRLRGQGHDPRSGSYLVQRLSIAIQRGNA 123
TG+ + A+ FI A+G RL RSG+ + RL IA RG+A
Sbjct: 859 TGLGLAIARGFIEAMGGRLSAGNRSDRSGAAMTIRLPIA-SRGDA 902
>UniRef50_Q3WJC2 Cluster: TPR repeat precursor; n=1; Frankia sp.
EAN1pec|Rep: TPR repeat precursor - Frankia sp. EAN1pec
Length = 459
Score = 31.1 bits (67), Expect = 8.9
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 98 RGQGHDPRSGSYLVQRLSIAIQRGNAASVMGTFGPGAIQS 137
RGQ DP S S LV R +A RG + + + + A +S
Sbjct: 256 RGQASDPSSVSLLVGRARVAAARGESEAALADYAVAATRS 295
>UniRef50_Q0EUF7 Cluster: ABC transporter related; n=2;
Thermoanaerobacter ethanolicus|Rep: ABC transporter
related - Thermoanaerobacter ethanolicus X514
Length = 507
Score = 31.1 bits (67), Expect = 8.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 103 DPRSGSYLVQRLSIAIQRGNAASVMGTFGPGAIQSGL 139
+P +G YLV+ +I +++G + G G G + GL
Sbjct: 273 EPNTGRYLVKDANIVLKKGEIVGLFGLVGAGRTEFGL 309
>UniRef50_Q7QUT6 Cluster: GLP_231_11923_13749; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_231_11923_13749 - Giardia lamblia
ATCC 50803
Length = 608
Score = 31.1 bits (67), Expect = 8.9
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 4 DSQIQPSILPRVPCAVTADAHSQTQSVIHTLDDLASYKNKIPVL 47
DS I+ ++LP +P A+ D +Q ++V + L + +NKI VL
Sbjct: 456 DSTIEANLLP-MPMAIDGDLQTQEKAVDAVITKLETIRNKIRVL 498
>UniRef50_Q4PES1 Cluster: Predicted protein; n=2; Ustilago
maydis|Rep: Predicted protein - Ustilago maydis (Smut
fungus)
Length = 577
Score = 31.1 bits (67), Expect = 8.9
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 16 PCAVTADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMDGCINNNVA 75
PCAV+ A + T S ++ L+ +P +++L G LR GC+N
Sbjct: 374 PCAVSQSAFVHDRIAGATQGGCPSRRHHDNWLRDLPIVSKHLRPGALRGTYLGCLNAART 433
Query: 76 VETTGVWSSEAKKFIAAIGHR---LRGQGHDPRSGSYL 110
++ VW E K+ + R L G P S SYL
Sbjct: 434 IKGHRVWLLELKRAVIVKDVRFSELESPGAGP-SPSYL 470
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.134 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,231,771
Number of Sequences: 1657284
Number of extensions: 5741975
Number of successful extensions: 13591
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 13585
Number of HSP's gapped (non-prelim): 13
length of query: 141
length of database: 575,637,011
effective HSP length: 93
effective length of query: 48
effective length of database: 421,509,599
effective search space: 20232460752
effective search space used: 20232460752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)
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