GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001203-TA|BGIBMGA001203-PA|undefined
         (141 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    22   6.7  
AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         22   8.8  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         22   8.8  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         22   8.8  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         22   8.8  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   8.8  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 18  AVTADAHSQTQSVIHTLDDLASYKN-KIPVLK 48
           A T DA  +   + HT+++LA+  N  + V+K
Sbjct: 260 ATTGDAAEEIDLMGHTVEELAAAANVSVEVIK 291


>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 21  ADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMD 67
           A+     Q   +T   LA +KN++       + A NLV    R I++
Sbjct: 229 AEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQIVN 275


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 21  ADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMD 67
           A+     Q   +T   LA +KN++       + A NLV    R I++
Sbjct: 229 AEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQIVN 275


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 21  ADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMD 67
           A+     Q   +T   LA +KN++       + A NLV    R I++
Sbjct: 229 AEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQIVN 275


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 21  ADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMD 67
           A+     Q   +T   LA +KN++       + A NLV    R I++
Sbjct: 229 AEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQIVN 275


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 21   ADAHSQTQSVIHTLDDLASYKNKIPVLKHIPKGARNLVAGKLRVIMD 67
            A+     Q   +T   LA +KN++       + A NLV    R I++
Sbjct: 1368 AEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQIVN 1414


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,166
Number of Sequences: 2123
Number of extensions: 5489
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 141
length of database: 516,269
effective HSP length: 58
effective length of query: 83
effective length of database: 393,135
effective search space: 32630205
effective search space used: 32630205
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)