GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001203-TA|BGIBMGA001203-PA|undefined
         (141 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC141881-1|AAI41882.1| 1537|Homo sapiens WNK1 protein protein.         30   3.2  
AJ296290-1|CAC15059.1| 2382|Homo sapiens putative protein kinase...    30   3.2  
AB002342-1|BAA20802.2| 2066|Homo sapiens KIAA0344 protein.             30   3.2  

>BC141881-1|AAI41882.1| 1537|Homo sapiens WNK1 protein protein.
          Length = 1537

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 5   SQIQPSILPRVPCAVTADAHSQTQSVIHTLDDLASYKNKIPVL--KHIPKGARN 56
           SQ QP++LP  P     +  S TQ     +DD+ + + K+  L  +H   GA++
Sbjct: 775 SQPQPALLPNQPHTHCPEVDSDTQPKAPGIDDIKTLEEKLRSLFSEHSSSGAQH 828


>AJ296290-1|CAC15059.1| 2382|Homo sapiens putative protein kinase
            protein.
          Length = 2382

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 5    SQIQPSILPRVPCAVTADAHSQTQSVIHTLDDLASYKNKIPVL--KHIPKGARN 56
            SQ QP++LP  P     +  S TQ     +DD+ + + K+  L  +H   GA++
Sbjct: 1620 SQPQPALLPNQPHTHCPEVDSDTQPKAPGIDDIKTLEEKLRSLFSEHSSSGAQH 1673


>AB002342-1|BAA20802.2| 2066|Homo sapiens KIAA0344 protein.
          Length = 2066

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 5    SQIQPSILPRVPCAVTADAHSQTQSVIHTLDDLASYKNKIPVL--KHIPKGARN 56
            SQ QP++LP  P     +  S TQ     +DD+ + + K+  L  +H   GA++
Sbjct: 1305 SQPQPALLPNQPHTHCPEVDSDTQPKAPGIDDIKTLEEKLRSLFSEHSSSGAQH 1358


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.134    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,499,467
Number of Sequences: 224733
Number of extensions: 696975
Number of successful extensions: 4167
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 4167
Number of HSP's gapped (non-prelim): 3
length of query: 141
length of database: 73,234,838
effective HSP length: 83
effective length of query: 58
effective length of database: 54,581,999
effective search space: 3165755942
effective search space used: 3165755942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)