Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001201-TA|BGIBMGA001201-PA|IPR003247|Calponin-like
actin-binding subtype, IPR001715|Calponin-like actin-binding,
IPR000557|Calponin repeat, IPR003096|SM22/calponin
(184 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.10c |stg1||SM22/transgelin-like actin modulating protein... 69 6e-13
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 67 1e-12
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 31 0.078
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 27 2.2
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 26 3.9
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 26 3.9
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 6.7
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 25 6.7
>SPAC4F8.10c |stg1||SM22/transgelin-like actin modulating protein
Stg1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 174
Score = 68.5 bits (160), Expect = 6e-13
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
Query: 20 EKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENI 79
EKEA+EWIE L K D L+ G +LC++ + ++ + + F MENI
Sbjct: 6 EKEAREWIEETLHTKLNAQLDLLDQLQSGVILCRICKEALGANI-RYKESNMPFVQMENI 64
Query: 80 TNF-QSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPA 138
+ F A + VP D+FQT DL+E+++ QV+ ++ + R + LGPK A
Sbjct: 65 SAFINYAQQVVHVPSQDMFQTSDLFERRNDEQVLRSIHSFSRYAAKMFPGKVRGLGPKLA 124
Query: 139 DECKRDFS-DEVLKAGQTVIGLQAGSNKGATQSGQNLGAGRK 179
++ R FS + + + V LQ GS TQ + + R+
Sbjct: 125 EKKPRVFSAQQQREFREGVNSLQYGSFDMPTQGTEKIAFSRR 166
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 67.3 bits (157), Expect = 1e-12
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 22 EAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGG-QFKMMENIT 80
EA++WIE LG P FE L++G VL L+ K +P + KI + QF+ +NI
Sbjct: 46 EAKKWIEECLGTDLGPTSTFEQSLRNGVVLALLVQKFQPDKLIKIFYSNELQFRHSDNIN 105
Query: 81 NFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 118
F I G+P+I F+ D++E K++ +V+ + AL
Sbjct: 106 KFLDFIHGIGLPEIFHFELTDIYEGKNLPKVIYCIHAL 143
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 31.5 bits (68), Expect = 0.078
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 22 EAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITN 81
EA++W+E ++ + F D L +G VLCQL K P + ++++ E T
Sbjct: 69 EAKKWLEEETNNEYQNLDDFVDALVNGKVLCQLAFKYYP---KLASNWKPRYQISERNTV 125
Query: 82 FQSA----IKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFAL 118
+ +A + G+ F+T DL + +I +V+ L AL
Sbjct: 126 YLNAFFHFLDFIGMFTPFRFETKDLVRRFNIPKVIYCLHAL 166
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 130 GPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKG 166
GP + K + K+ D V K G V G + SN G
Sbjct: 343 GPLISEKAISKVKQHVEDAVQKGGVVVTGGKVASNLG 379
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 25.8 bits (54), Expect = 3.9
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 16/108 (14%)
Query: 16 NPEKEKEAQEWIEGVL------GAKFPPG-ELFE--DVLKDGTVLCQLINKLKPGSV--- 63
N E+ +E + I VL G++ P E FE D KDG +L +LIN P ++
Sbjct: 111 NEEERREFIKHINSVLAGDPDVGSRVPINTETFEFFDQCKDGLILSKLINDSVPDTIDER 170
Query: 64 ----PKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKD 107
+ N FK +EN ++ KA G I D+ E ++
Sbjct: 171 VLNKQRNNKPLDNFKCIENNNVVINSAKAMGGISITNIGAGDILEGRE 218
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 3.9
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 4 ERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPPGELFEDV 44
ER+ AK A+K EK+K + ++ EG G + PP E+V
Sbjct: 665 EREA-AKAATKSEAEKQKPSGKFEEGT-GGRAPPPPPAEEV 703
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 39 ELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQ 83
E + +LK +C I +LKPGS K+++ E+ T F+
Sbjct: 165 EFYMHLLKHMVAVC--IAELKPGSCSKVSSPVSAITADESATGFR 207
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 25.0 bits (52), Expect = 6.7
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 2 SLERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPG 61
S++ + + ++A K K + E +K P E V+K+ V + +K KP
Sbjct: 175 SVKAKKKLRLAEKPASNNSKAGKSSQESKKSSK-APAESAAAVIKEDKVSDRKKSKKKPK 233
Query: 62 SVPKINTTGGQ 72
P N+T Q
Sbjct: 234 KTPVSNSTASQ 244
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,602
Number of Sequences: 5004
Number of extensions: 33598
Number of successful extensions: 55
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 8
length of query: 184
length of database: 2,362,478
effective HSP length: 69
effective length of query: 115
effective length of database: 2,017,202
effective search space: 231978230
effective search space used: 231978230
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 51 (24.6 bits)
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