Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001201-TA|BGIBMGA001201-PA|IPR003247|Calponin-like
actin-binding subtype, IPR001715|Calponin-like actin-binding,
IPR000557|Calponin repeat, IPR003096|SM22/calponin
(184 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 114 5e-26
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 4e-22
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 84 8e-17
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 75 3e-14
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 49 3e-06
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 45 3e-05
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 39 0.003
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 36 0.026
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 33 0.19
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.25
SB_595| Best HMM Match : CH (HMM E-Value=0) 31 0.43
SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_15403| Best HMM Match : CH (HMM E-Value=0) 29 3.0
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 5.3
SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_42674| Best HMM Match : DUF26 (HMM E-Value=1) 28 5.3
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 114 bits (274), Expect = 5e-26
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 11/183 (6%)
Query: 7 VRAKIASKRNPEKEKEAQEWIEGVLGAKF--PPG--ELFEDVLKDGTVLCQLINKLKPGS 62
V+A I SK +P KE+EA++WI+ VLG G + LKDG VLC+L N+L G
Sbjct: 420 VKAGIDSKYDPTKEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANRL--GG 477
Query: 63 VPKINTTGGQFKMMENITNFQSAIKA-YGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRE 121
KIN FK MENI NF S I+ GV D+FQTVDL+EK ++ V+ + A+GR
Sbjct: 478 DLKINQQKMPFKQMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIHAVGRR 537
Query: 122 TYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVI-GLQAG--SNKGATQSGQNLGAGR 178
Y + P LGPK + + R F++ L G+T+I Q G + AT SGQ+ G R
Sbjct: 538 AYSLGK-DVPQLGPKESTKNPRQFTERQLNEGKTIINSFQMGPAAKNVATASGQSFGRQR 596
Query: 179 KIL 181
+I+
Sbjct: 597 QII 599
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 101 bits (242), Expect = 4e-22
Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
Query: 13 SKRNPEKEKEAQEWIEGVLGAKFPPGELFED----VLKDGTVLCQLINKLKPGSVPKINT 68
+K + + +A WIEG+LG + G+ D VLKDG VLC++ NKL G KIN+
Sbjct: 62 AKYDSDLAAQATAWIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKL--GGNIKINS 119
Query: 69 TGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEW 128
+ FKMMEN F GVP D+FQTVDL+EK+++ V++ + ALGR+ + +
Sbjct: 120 SKMAFKMMENTGKFLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGK- 178
Query: 129 SGPCLGPKPADECKRDFSDEVLKAGQ 154
+ LGPK A R+F++E +AGQ
Sbjct: 179 TCLALGPKEASANPREFTEEQRRAGQ 204
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 83.8 bits (198), Expect = 8e-17
Identities = 61/152 (40%), Positives = 83/152 (54%), Gaps = 17/152 (11%)
Query: 10 KIASKRNPEKEKEAQEWIEGVLGAK-FPPGELFEDV---LKDGTVLCQLINKLKPGSVPK 65
KI K +P++E+EA+ WIE VLG K F E +DV LKDG +L +L KL G+ K
Sbjct: 17 KILEKYDPQQEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIKL--GAKIK 74
Query: 66 INTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRH 125
+N FK MENI NF S GV D FQT DL+ D A + S +
Sbjct: 75 VNEQNMPFKQMENIGNFLSHCGHLGVASGDQFQTADLY---DNANMTSCQLIKDLDI--- 128
Query: 126 AEWSGPCLGPKPADECKRDFSDEVLKAGQTVI 157
P LGPK A+ R+F++E L+AG++++
Sbjct: 129 -----PTLGPKEAEANVREFTEEQLRAGESIL 155
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 1 MSLERQVRAKIASKRNP---EKEKEAQEWIEGVLGAKF--PPGELFEDVLKDGTVLCQLI 55
+S E +K + P ++ K + WIEG F + F++ LK G VLC+L
Sbjct: 45 VSKENLKTSKFIMSKKPWPMDRAKVVRMWIEGKTSCNFGGDTADDFQNTLKSGVVLCKLA 104
Query: 56 NKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 111
N ++PG++ KIN F MMENI NF + ++ GV F T+DL+E K++ QV
Sbjct: 105 NAIQPGAIKKINNAKMNFMMMENIENFCNFVQTKGVASQYQFVTIDLFEGKNMHQV 160
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 10/118 (8%)
Query: 4 ERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP---------PGELFEDVLKDGTVLCQL 54
E+ ++ +K E E A+ W+E + G PGE F + L+ G +LC++
Sbjct: 259 EKNNVGQVDAKYPKELEGNARRWVETMYGDTVAWGEERPNQRPGETFAEPLRSGVILCKI 318
Query: 55 INKLKPGSVPKINTTGGQFKMMENITNF-QSAIKAYGVPDIDVFQTVDLWEKKDIAQV 111
NK+K ++PKI + F M ENI+ F + G+ +++FQTVDL+E++++ V
Sbjct: 319 ANKIKSNAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLNLFQTVDLFERQNVGMV 376
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 9/59 (15%)
Query: 3 LERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP---------PGELFEDVLKDGTVLC 52
L +V KI SK + E E + ++W+E +LG PGE F D + DG VLC
Sbjct: 17 LTAEVNRKIQSKYDTELEMQCRDWLEKMLGENIEWGVETEYSRPGESFADGIFDGIVLC 75
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 54 LINKLKPGSVPKIN-TTGGQF---KMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKD 107
++N++ PG++ KI+ GG+F +++ENI F A + + +D+F DL+EK +
Sbjct: 203 VMNEVFPGAISKIHGINGGRFHGFQILENIEKFLKACQGEPFNCNVVDLFSPGDLYEKNN 262
Query: 108 IAQV 111
+ QV
Sbjct: 263 VGQV 266
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 56.8 bits (131), Expect = 1e-08
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 11/125 (8%)
Query: 5 RQVRAKIASKRNPEKEKEAQEWIE--GVLGAKF----PPGELFE--DVLKDGTVLCQLIN 56
R A +S R+ E+ K A++W+ GVL A P LF+ L+DG +LCQ+ N
Sbjct: 7 RTASALSSSGRDVEEWKMARDWMISIGVLPAHGRVTDPNFTLFDFAQSLRDGVLLCQVAN 66
Query: 57 KLKPGSVPKINTTG--GQFKMMENITNFQSA-IKAYGVPDIDVFQTVDLWEKKDIAQVVS 113
L PG+V + QF ++NI NF +A + + + D D+F +L++ D +VV+
Sbjct: 67 VLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDLFDANELYDVSDFGKVVN 126
Query: 114 TLFAL 118
TL L
Sbjct: 127 TLSKL 131
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 56 NKLKPGSVPKINTTGGQ--FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDI 108
N ++PG + K + G+ FKMMENI F + IK+YGV + +F TVDL+EK+++
Sbjct: 189 NAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 12/83 (14%)
Query: 74 KMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEWSGPCL 133
+ MENI NF ++ GV +D+FQTVDL+EK+++A R + P L
Sbjct: 16 RKMENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAA------------RAKGLNCPQL 63
Query: 134 GPKPADECKRDFSDEVLKAGQTV 156
GPK A+ R F ++ L+AG+ +
Sbjct: 64 GPKEAEANPRSFDEDKLRAGKGI 86
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 22 EAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITN 81
EA+ WIE F + F + L DG +LC+LI + SV +IN G +N++
Sbjct: 32 EARRWIERATFTPFKNDD-FRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDNLSV 90
Query: 82 FQSAIKAYGVPDIDVFQTVDLWE 104
F A +A G+ +F+ DL E
Sbjct: 91 FFRACEALGLDKYQLFEHEDLDE 113
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 62 SVPKINTTGGQFKMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKDIAQVVSTLFALG 119
+ P N M ENI NF +A + + D+FQTV L+E++++ QV+S + A
Sbjct: 884 NTPSTNRKSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFA 943
Query: 120 RETYRH 125
R+ +H
Sbjct: 944 RKVRKH 949
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 45 LKDGTVLCQLINKLKPGSVPKINTTGG------QFKMMENITNFQSAIKAYGVPDIDVFQ 98
L DG VLC L+N G++P I+ K M+N+ F A K GV +
Sbjct: 336 LADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVDRELLCS 395
Query: 99 TVDLWEKKDIAQVVSTLFAL 118
+ D+ ++K +V +T+ AL
Sbjct: 396 SADILQEKSPQRVCATVQAL 415
>SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 11 IASKRNPEKEKEAQEWIEGVLGAKFPPGE-LFEDVLKDGTVL 51
+++K +P + EA +WIE VLG K G+ + EDVLKDG +L
Sbjct: 1 MSAKYDPVMDAEAVDWIEKVLGEKVCQGKSINEDVLKDGQIL 42
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 23/130 (17%)
Query: 17 PEKEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKP---------------G 61
P KE A WI +LG + + F +L G VLC+L N ++ G
Sbjct: 27 PLKEDLAS-WISRLLGEEELNTDTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRRG 85
Query: 62 SVPKINTT-------GGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVST 114
P T G F +N++NF + VPD+ +F+T DL K+ V+ T
Sbjct: 86 LFPACGVTYKQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLLT 145
Query: 115 LFALGRETYR 124
L + R+ ++
Sbjct: 146 LLEVARKAFK 155
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 35.5 bits (78), Expect = 0.026
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 76 MENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 111
M I F +GV D+FQTVDL+EK++I QV
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 6 QVRAKIASKRNPEKEKEAQEWIEGVLG 32
++ K+++K +P + EA +WIE VLG
Sbjct: 671 ELSRKMSAKYDPVMDAEAVDWIEKVLG 697
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 41 FEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVP 92
F+ +DG +C+L+N L+PG +P Q+A A+G+P
Sbjct: 449 FDTDWRDGMAICELVNALQPGLIPDSKYKEKTNSEATAKIGIQTAHDAFGIP 500
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 32.3 bits (70), Expect = 0.25
Identities = 12/27 (44%), Positives = 21/27 (77%)
Query: 131 PCLGPKPADECKRDFSDEVLKAGQTVI 157
P LGPK A+ R+F++E L+AG++++
Sbjct: 10 PTLGPKEAEANVREFTEEQLRAGESIL 36
>SB_595| Best HMM Match : CH (HMM E-Value=0)
Length = 905
Score = 31.5 bits (68), Expect = 0.43
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 19 KEKEAQEWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMM-E 77
+EK + WI LG K L+ D L DG +L QL ++++PG V FK M
Sbjct: 674 EEKTFRNWINS-LGIKPFVQNLYLD-LDDGMILFQLFDQVQPGIVNYDKVNKPPFKKMGA 731
Query: 78 NITNFQSAIKAYGVPDIDVFQTVDLWEK 105
+ ++ A V D+ F V + K
Sbjct: 732 KMKKLENCNYAISVADLLKFSLVGVGGK 759
>SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 133 LGPKPADECKRDFSDEVLKAGQTVIG 158
LGP P+D+ RDF L++GQ V G
Sbjct: 233 LGPDPSDKKVRDFIWNTLQSGQVVPG 258
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Query: 39 ELFEDVLKDGTVLCQLINKLKPGSV 63
+L+E V KDG +LC++IN PG++
Sbjct: 78 DLYEKV-KDGILLCKMINLSAPGTI 101
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 26 WIEGVLGAKF--PPGELFEDVLKDGTVLCQLINKLKPGSVP 64
++ G +G K+ PP FE +L+ T +I L PGS P
Sbjct: 1904 FVTGRMGEKYVTPPVLSFESILEQSTPFSPIIFILSPGSDP 1944
>SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 28 EGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTG 70
+G LGA F P +LF + + + ++N G V + TG
Sbjct: 73 QGSLGANFDPSKLFYGYMANLNIWANVLNDFNRGKVYEQGCTG 115
>SB_42674| Best HMM Match : DUF26 (HMM E-Value=1)
Length = 493
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 31 LGAKFPPGELFEDV--LKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKA 88
L A PP DV L GT L LKP PK+ G + + +I F S++ A
Sbjct: 89 LMATLPPTSTAHDVERLSTGTKFA-LRQWLKPIVAPKVCNNTGLHRPVAHIPPFTSSVAA 147
Query: 89 YGVPDIDVFQTVDLWEKKDIAQVVST 114
G I + W D ++++ +
Sbjct: 148 QGKAPIKSVSALS-WPGTDQSEIMDS 172
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,319,180
Number of Sequences: 59808
Number of extensions: 250668
Number of successful extensions: 374
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 337
Number of HSP's gapped (non-prelim): 28
length of query: 184
length of database: 16,821,457
effective HSP length: 78
effective length of query: 106
effective length of database: 12,156,433
effective search space: 1288581898
effective search space used: 1288581898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
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