Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001201-TA|BGIBMGA001201-PA|IPR003247|Calponin-like
actin-binding subtype, IPR001715|Calponin-like actin-binding,
IPR000557|Calponin repeat, IPR003096|SM22/calponin
(184 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79755-7|CAB02104.1| 192|Caenorhabditis elegans Hypothetical pr... 130 4e-31
AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein. 130 4e-31
AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin prot... 99 2e-21
AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin prot... 77 1e-14
U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protei... 75 4e-14
U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav (... 42 3e-04
U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav (... 42 3e-04
DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein. 42 3e-04
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 33 0.12
U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein. 30 0.86
U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein. 30 0.86
U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein. 30 0.86
U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein. 30 0.86
U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein. 30 0.86
AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated... 30 0.86
AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated... 30 0.86
AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated... 30 0.86
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 29 2.0
U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 28 3.5
U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical pr... 27 8.0
U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical pr... 27 8.0
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z79755-7|CAB02104.1| 192|Caenorhabditis elegans Hypothetical
protein F43G9.9 protein.
Length = 192
Score = 130 bits (315), Expect = 4e-31
Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 6/176 (3%)
Query: 6 QVRAKIASKRNPEKEKEAQEWIEGVLGAKFPP---GELFEDVLKDGTVLCQLINKLKPGS 62
+ + KI K + E +W++ V G F + V +DG++LC L N LKPGS
Sbjct: 18 EAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSLKPGS 77
Query: 63 VPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRET 122
V K+NT+ FK MENI+ F + Y V ++FQTVDL+E +D V+ L +L R++
Sbjct: 78 VKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKS 136
Query: 123 YRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQNLGAGR 178
++ SG LGPK A +R+++DE LKAG VIGLQ GSNKGAT SG N+G R
Sbjct: 137 EKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMGNTR 190
>AF169201-2|AAF01679.1| 192|Caenorhabditis elegans CPN-1 protein.
Length = 192
Score = 130 bits (315), Expect = 4e-31
Identities = 76/176 (43%), Positives = 105/176 (59%), Gaps = 6/176 (3%)
Query: 6 QVRAKIASKRNPEKEKEAQEWIEGVLGAKFPP---GELFEDVLKDGTVLCQLINKLKPGS 62
+ + KI K + E +W++ V G F + V +DG++LC L N LKPGS
Sbjct: 18 EAQQKIYEKYDKNLAGEILQWVQNVTGQSFDTQGDADNLVKVFQDGSLLCTLANSLKPGS 77
Query: 63 VPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRET 122
V K+NT+ FK MENI+ F + Y V ++FQTVDL+E +D V+ L +L R++
Sbjct: 78 VKKVNTSAMAFKKMENISFFLKFAEEY-VQKSELFQTVDLYEGQDPNAVLICLASLARKS 136
Query: 123 YRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQNLGAGR 178
++ SG LGPK A +R+++DE LKAG VIGLQ GSNKGAT SG N+G R
Sbjct: 137 EKNFGRSG--LGPKEAQGDRREWTDEQLKAGHNVIGLQMGSNKGATASGLNMGNTR 190
>AF040641-1|AAB94947.2| 203|Caenorhabditis elegans Calponin protein
2 protein.
Length = 203
Score = 99.1 bits (236), Expect = 2e-21
Identities = 71/188 (37%), Positives = 97/188 (51%), Gaps = 10/188 (5%)
Query: 3 LERQVRAKIASKRNPEKEKEAQEWIEGVLGAKFP----PGELFEDV---LKDGTVLCQLI 55
L R+++ K ++ E+ E +WIE V G +F E DV LKDG +LC+LI
Sbjct: 10 LSRELQKKNDARFVLEEAIEVLKWIENVTGERFSFDVTTCESSTDVSNLLKDGVMLCKLI 69
Query: 56 NKLKPGSVPKINTTGGQ-FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVST 114
KL P N F MMENI+NF +A K +GV +I FQTVDL+E K +V+
Sbjct: 70 EKLDPSCRVVYNKKPKMAFPMMENISNFLAAAKQFGVMEISCFQTVDLYENKQCYKVIEC 129
Query: 115 LFALGRETY-RHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQN 173
L L R + P K A R F + V++ G+ VI LQ G+NK A+Q G +
Sbjct: 130 LRLLAAVAQSRSSHLEHPAWVVKLAQSSPRQFPEAVMRRGEMVIPLQYGTNKCASQKGMS 189
Query: 174 -LGAGRKI 180
G R+I
Sbjct: 190 PYGLPRQI 197
>AF039711-7|AAB96713.3| 154|Caenorhabditis elegans Calponin protein
4 protein.
Length = 154
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 10 KIASKRNPEKEKEAQEWIEGVLGAKFP---PGELFEDVLKDGTVLCQLINKLKPGSVPKI 66
K ASK N + EWI + F + F + LKDG LC+L+N +K GSV KI
Sbjct: 20 KQASKFNDVEAGYLLEWIRDLTKEDFDCEASRDNFREQLKDGQRLCKLVNAIKAGSVKKI 79
Query: 67 NTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRE 121
F +ENI F +A ++ GV D + FQ+VDL++ +D+ V TL +L R+
Sbjct: 80 MKPISNFNCLENINQFSTAARSLGVKDEETFQSVDLFDGRDLFSVTVTLQSLARK 134
>U97013-5|AAB52338.1| 142|Caenorhabditis elegans Calponin protein 3
protein.
Length = 142
Score = 74.5 bits (175), Expect = 4e-14
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Query: 7 VRAKIASKRNPEKEKEAQEWIEGVLGAKFPP-GEL--FEDVLKDGTVLCQLINKLKPGSV 63
VR K SK ++ EWI+ + G GE F ++LKDGT+LC+ N ++ GS+
Sbjct: 14 VRQKQDSKFIDKEATLLLEWIKKLSGENISTSGERDNFHNLLKDGTLLCKAANGIEAGSI 73
Query: 64 PKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGR 120
K+ F MENI F K GVP+ + FQ+V+L E +D+ V TL +LGR
Sbjct: 74 KKVQKPISTFACMENINAFVEFAKKQGVPNEETFQSVELVEGRDLFSVCVTLLSLGR 130
>U23520-5|AAC46554.4| 975|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform a protein.
Length = 975
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 41 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 95
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 32 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 91
Query: 96 VFQTVDLWEKKDIAQVVSTL 115
+F DL+ +V+ TL
Sbjct: 92 LFTAEDLYYMNGFQKVLKTL 111
>U23520-4|ABB88236.1| 1007|Caenorhabditis elegans Mammalian vav
(oncogene) relatedprotein 1, isoform b protein.
Length = 1007
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 41 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 95
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 96 VFQTVDLWEKKDIAQVVSTL 115
+F DL+ +V+ TL
Sbjct: 124 LFTAEDLYYMNGFQKVLKTL 143
>DQ136172-1|AAZ66767.1| 1007|Caenorhabditis elegans VAV-1 protein.
Length = 1007
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 41 FEDVLKDGTVLCQLINKLKPGSV--PKINTTG--GQFKMMENITNFQSAIKAY-GVPDID 95
F VL+DG +LC+L N L P + KI T F NI F K Y + D D
Sbjct: 64 FASVLRDGILLCRLANTLVPNGIDQKKIMRTNQPSPFLCCNNINYFAMFCKTYFNLEDAD 123
Query: 96 VFQTVDLWEKKDIAQVVSTL 115
+F DL+ +V+ TL
Sbjct: 124 LFTAEDLYYMNGFQKVLKTL 143
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 45 LKDGTVLCQLINKLKPGSVPKINTTGGQF---KMMENITNFQSAIKAYGVPDIDVFQTVD 101
L DG LC+ INKL P S+ ++T + N+ F + GVP+ + +D
Sbjct: 548 LSDGQELCKFINKLHPESISLASSTDSSIATTRSKMNVDRFLQYCRKIGVPETTLCSQMD 607
Query: 102 LWEKKDIAQVVSTLFALGR 120
+ K++ +V T+ + +
Sbjct: 608 IISKRNPQKVARTVLTVAK 626
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 33.1 bits (72), Expect = 0.12
Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 21 KEAQEWIEGVLGAK-FPPGELFEDVLKDGTVLCQLINKLKPGSVP------------KIN 67
+E + W+ L P E+ L++G +L +L N P VP + N
Sbjct: 49 EEVRTWLSECLNDDTLVPTTDLEENLRNGVLLARLGNSFAPEVVPEKGIFDIRQEKYRQN 108
Query: 68 TTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYR 124
++ +NI ++ A+++ +P+I + +T D++E +++ + V LFAL +R
Sbjct: 109 DATPVYRHSDNIMQWRRAMESVRLPEIFIPETADVFEGRNM-KTVFCLFALATLLHR 164
>U04712-3|AAA81903.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 93 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 146
Query: 173 NLGAGRK 179
G GR+
Sbjct: 147 GFGTGRR 153
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 300 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04712-2|AAA81902.1| 565|Caenorhabditis elegans unc-87 protein.
Length = 565
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 301 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 354
Query: 173 NLGAGRK 179
G GR+
Sbjct: 355 GFGTGRR 361
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 508 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>U04712-1|AAA81901.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 173 NLGAGRK 179
G GR+
Sbjct: 164 GFGTGRR 170
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 317 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>U04711-2|AAA81900.1| 357|Caenorhabditis elegans unc-87 protein.
Length = 357
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 93 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 146
Query: 173 NLGAGRK 179
G GR+
Sbjct: 147 GFGTGRR 153
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 300 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 333
>U04711-1|AAA81899.1| 374|Caenorhabditis elegans unc-87 protein.
Length = 374
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 173 NLGAGRK 179
G GR+
Sbjct: 164 GFGTGRR 170
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 317 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>AF106590-6|AAT68897.1| 544|Caenorhabditis elegans Uncoordinated
protein 87, isoform c protein.
Length = 544
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 280 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 333
Query: 173 NLGAGRK 179
G GR+
Sbjct: 334 GFGTGRR 340
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 487 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 520
>AF106590-5|AAC78234.1| 565|Caenorhabditis elegans Uncoordinated
protein 87, isoform a protein.
Length = 565
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 301 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 354
Query: 173 NLGAGRK 179
G GR+
Sbjct: 355 GFGTGRR 361
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 508 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 541
>AF106590-4|AAK68303.1| 374|Caenorhabditis elegans Uncoordinated
protein 87, isoform b protein.
Length = 374
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 114 TLFALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVIGLQAGSNKGATQSGQ- 172
T F GR+ R G + PAD + +E ++ + ++ LQAG+NK +Q G
Sbjct: 110 TGFGSGRDVCRE----GVRVAQNPADLA--ELPEEKIRMSEGIVRLQAGTNKYDSQKGMT 163
Query: 173 NLGAGRK 179
G GR+
Sbjct: 164 GFGTGRR 170
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKI 180
E +K +T+I QAG NKG +Q + GA R +
Sbjct: 317 EAMKVSETIIPSQAGWNKGDSQKKMTSFGAPRDV 350
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 47 DGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKK 106
+G LC +++ +P + T M I+N Q A+ + + I TVD++
Sbjct: 362 NGLALCAVLHSYRPDLIGDYETLDISNNMSGRISNIQRALDSLTLIGITEVPTVDMFLTP 421
Query: 107 DIAQVVSTLFALGR 120
D Q+ L L R
Sbjct: 422 DRKQIEFLLQHLRR 435
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/74 (25%), Positives = 32/74 (43%)
Query: 47 DGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKK 106
+G LC +++ +P + T M I+N Q A+ + + I TVD++
Sbjct: 362 NGLALCAVLHSYRPDLIGDYETLDISNNMSGRISNIQRALDSLTLIGITEVPTVDMFLTP 421
Query: 107 DIAQVVSTLFALGR 120
D Q+ L L R
Sbjct: 422 DRKQIEFLLQHLRR 435
>U28734-1|AAB52603.2| 397|Caenorhabditis elegans Hypothetical
protein C53C9.2 protein.
Length = 397
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSG 171
E LK G T + QAG+NK TQ G
Sbjct: 20 EQLKGGNTFLSQQAGTNKFETQKG 43
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 143 RDFSDEVLKAGQTVIGLQAGSNKGATQSG 171
+D +E+ + + ++ LQ+G+NK A+Q G
Sbjct: 241 KDIEEELKQKSEGIVPLQSGTNKLASQRG 269
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 8 RAKIASKRNPEKEKEAQEWIE 28
RAK+ K+ PEKEKEA +I+
Sbjct: 103 RAKMVYKKKPEKEKEAVPFID 123
>U88170-3|AAB42247.1| 338|Caenorhabditis elegans Hypothetical
protein C10G11.7 protein.
Length = 338
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 41 FEDVLKDGTVLCQLINKLKPGSV 63
F KDG VL +L N L+PG+V
Sbjct: 157 FIGFFKDGDVLAKLANALEPGAV 179
>U64856-6|AAB04989.1| 406|Caenorhabditis elegans Hypothetical
protein T25F10.6a protein.
Length = 406
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKIL 181
E L + +I +QAGSNK A+Q G G R ++
Sbjct: 94 EKLMRSEGIIPIQAGSNKYASQKGMTGFGVPRDVI 128
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 148 EVLKAGQTVIGLQAGSNKGATQSGQ-NLGAGRKIL 181
E L + +I +QAGSNK A+Q G G R ++
Sbjct: 94 EKLMRSEGIIPIQAGSNKYASQKGMTGFGVPRDVI 128
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.134 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,713,236
Number of Sequences: 27539
Number of extensions: 195965
Number of successful extensions: 403
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 345
Number of HSP's gapped (non-prelim): 63
length of query: 184
length of database: 12,573,161
effective HSP length: 77
effective length of query: 107
effective length of database: 10,452,658
effective search space: 1118434406
effective search space used: 1118434406
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -