Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001200-TA|BGIBMGA001200-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(96 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 28 0.22
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 27 0.38
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 26 1.2
SPAC824.06 |tim14||TIM23 translocase complex subunit Tim14|Schiz... 25 2.0
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 24 3.5
SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon... 24 3.5
SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 23 6.2
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 23 6.2
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 23 8.2
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 23 8.2
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 23 8.2
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 23 8.2
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 28.3 bits (60), Expect = 0.22
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 29 KVYGSHEGSLTEKR-KQRRIRTTFTSAQLKELERAFQETHYPDIY 72
KVY H S E++ K ++ FT+ +K L+ E + D++
Sbjct: 237 KVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLF 281
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 27.5 bits (58), Expect = 0.38
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 44 QRRIR-TTFTSAQLKELERAFQETHYPD 70
QRR+R T+F + K +R+ ++H+PD
Sbjct: 143 QRRVRKTSFDESTAKSKKRSIADSHFPD 170
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 25.8 bits (54), Expect = 1.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 58 ELERAFQETHYPDIYTREEIAMKIDLTEARV 88
EL RAF+ HY D EE+ + L ARV
Sbjct: 724 ELVRAFEPMHYDDEVLLEELMKSVSLA-ARV 753
>SPAC824.06 |tim14||TIM23 translocase complex subunit
Tim14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 25.0 bits (52), Expect = 2.0
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 3/91 (3%)
Query: 8 AGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRI---RTTFTSAQLKELERAFQ 64
AG+I R Y G+ + G E ++ + + T T ++KE R
Sbjct: 17 AGKIGVDAFRKYRNLNGGVKAFLKGGFESKMSRAEAIQILSLNNRTLTRQKIKEAHRRLM 76
Query: 65 ETHYPDIYTREEIAMKIDLTEARVQVAKELR 95
++PD +A K++ ++ + + +R
Sbjct: 77 LANHPDRGGSPYVASKVNEAKSLLDADRSIR 107
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 24.2 bits (50), Expect = 3.5
Identities = 15/78 (19%), Positives = 36/78 (46%)
Query: 16 HRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 75
HR+ S+ +T Y + L + + + S QL+ A ++ + T+E
Sbjct: 162 HRLLSKDETDDIESAYLNLRSHLQVQEQVYAEKDHEYSLQLQSYREAAEKAKQDILETKE 221
Query: 76 EIAMKIDLTEARVQVAKE 93
++ ++ ++ +++ AKE
Sbjct: 222 NLSSELSISNIQLKEAKE 239
>SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 24.2 bits (50), Expect = 3.5
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 51 FTSAQLKELERAFQETHYPDIYTRE----EIAMKIDLTEARVQVAKEL 94
F + LERAF+E H DI E +AM + E R + L
Sbjct: 514 FNKEAQQSLERAFEENHQIDIAALELNTLRMAMNANYHEVRSAIVLAL 561
>SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 992
Score = 23.4 bits (48), Expect = 6.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQ 44
SESQ G+ Y V G + L +RKQ
Sbjct: 922 SESQKGMLYFVDGVTDEMLQNRRKQ 946
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 23.4 bits (48), Expect = 6.2
Identities = 12/59 (20%), Positives = 29/59 (49%)
Query: 13 CKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDI 71
C++ I + +P +V + + ++++RKQR+ + + ER +E Y ++
Sbjct: 511 CEVAFIECDWSKIIPKEVLLTFKSEISKRRKQRKAQEMREERYRQRAERDTEEQIYSEL 569
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 23.0 bits (47), Expect = 8.2
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 18 IYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKEL 59
IY + +T L H L EK K R+I S + ++
Sbjct: 257 IYVDDETKLTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQV 298
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 23.0 bits (47), Expect = 8.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 19 YSESQTGLPYKVYGSHEGSLT 39
Y+E + GLP++ Y H G T
Sbjct: 215 YAELEKGLPFEQYLVHPGLCT 235
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 23.0 bits (47), Expect = 8.2
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 15 IHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQE 65
IH YS +QTGL S E + ++ ++ S +E+ R E
Sbjct: 255 IHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSE 305
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 23.0 bits (47), Expect = 8.2
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1 METLFVEAGEINCKIHRIYSESQTGLP 27
++++ + AG NCK +ES G+P
Sbjct: 2899 LKSILILAGTTNCKACLAINESIAGVP 2925
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,162
Number of Sequences: 5004
Number of extensions: 12280
Number of successful extensions: 41
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 31
Number of HSP's gapped (non-prelim): 12
length of query: 96
length of database: 2,362,478
effective HSP length: 62
effective length of query: 34
effective length of database: 2,052,230
effective search space: 69775820
effective search space used: 69775820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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