Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001200-TA|BGIBMGA001200-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(96 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 35 0.009
02_05_0286 - 27506925-27507278,27508439-27508812,27509041-275092... 34 0.015
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 33 0.046
04_04_0841 - 28574497-28574883,28575815-28576188,28576262-285764... 32 0.080
08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127 31 0.18
08_02_0052 + 11699468-11699700,11699799-11699916,11699991-117006... 30 0.24
08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160 30 0.32
02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,323... 29 0.43
04_04_1231 - 31934745-31935125,31935230-31935325,31936215-319362... 29 0.56
01_06_0212 + 27575406-27575604,27575723-27576241,27576371-27576387 29 0.56
01_06_0787 - 31999632-32000045,32000128-32000214,32000295-320005... 28 0.98
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 27 2.3
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 27 3.0
01_06_0848 + 32426550-32426613,32427013-32427167,32428470-324285... 27 3.0
12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-25... 26 4.0
11_04_0332 + 16465360-16465769,16465873-16466272,16466379-164664... 26 4.0
11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-23... 26 4.0
10_08_1025 - 22391267-22391767,22392641-22392736,22392838-223931... 26 4.0
06_03_0934 - 26073084-26073220,26073296-26073345,26073465-260736... 26 4.0
08_02_0670 - 19877091-19877618,19880033-19880436,19880505-19880622 26 5.3
03_01_0533 - 3984158-3984364,3984541-3984711,3985158-3985226,398... 26 5.3
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 25 6.9
08_02_1180 + 24980042-24980784,24980874-24981168,24981650-249818... 25 6.9
04_02_0017 - 8572400-8572732,8572818-8572919,8573138-8573230,857... 25 6.9
02_03_0415 + 18805541-18805610,18805962-18806128,18806616-188066... 25 6.9
01_01_0981 + 7766025-7766753 25 6.9
12_02_1269 + 27462644-27463612 25 9.2
12_02_1268 + 27458823-27460046 25 9.2
12_02_0191 + 15178717-15179045,15179147-15179546,15179624-151796... 25 9.2
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 25 9.2
01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855 25 9.2
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 35.1 bits (77), Expect = 0.009
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 26 LPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTE 85
+P V G S + + +R ++T + QL+ LER + E YP+ R E+++K+ LT+
Sbjct: 41 VPAAVGGGAGASGSSGKVKRVMKTPY---QLEVLERTYTEDPYPNETMRAELSVKLGLTD 97
Query: 86 ARVQV 90
++Q+
Sbjct: 98 RQLQM 102
>02_05_0286 -
27506925-27507278,27508439-27508812,27509041-27509218,
27510878-27511105,27511215-27511316,27511415-27512131,
27512270-27512387,27512500-27512744,27512854-27513054,
27513920-27514324
Length = 973
Score = 34.3 bits (75), Expect = 0.015
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
E S + KRK+R R T Q++ELE F+E +PD R E++ ++ L +V+
Sbjct: 260 EPSNSRKRKKRYHR--HTPQQIQELEALFKECPHPDEKQRAELSRRLSLDARQVK 312
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 32.7 bits (71), Expect = 0.046
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
RK+++ T Q++ELE F+E +PD R E++ +++L +V+
Sbjct: 120 RKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVK 167
>04_04_0841 -
28574497-28574883,28575815-28576188,28576262-28576439,
28576816-28576896,28578134-28578361,28578460-28578579,
28578646-28579353,28579471-28579588,28579686-28579978,
28580101-28580169
Length = 851
Score = 31.9 bits (69), Expect = 0.080
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
KRK+R R T Q++ELE F+E +PD R E++ ++ L +V+
Sbjct: 103 KRKKRYHR--HTPQQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVK 149
>08_01_0574 + 5103466-5103534,5104526-5104806,5104959-5105127
Length = 172
Score = 30.7 bits (66), Expect = 0.18
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAM 79
SE+ G + G + RK+R R T Q++E+E F+E +PD R+E++
Sbjct: 78 SENVDGAGDGLSGDDQDPNQRPRKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSR 135
Query: 80 KIDLTEARVQ 89
++ L +V+
Sbjct: 136 ELGLEPLQVK 145
>08_02_0052 +
11699468-11699700,11699799-11699916,11699991-11700659,
11700741-11700842,11700921-11701181,11701838-11702009,
11702128-11702528,11703171-11703587
Length = 790
Score = 30.3 bits (65), Expect = 0.24
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
RK+ R T Q + L RAFQ PD +++A ++++TE +++
Sbjct: 59 RKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAKELNMTETQIK 106
>08_01_0246 - 2028701-2029060,2029149-2030606,2030729-2031160
Length = 749
Score = 29.9 bits (64), Expect = 0.32
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
RK+R R T Q++ELE F+E +PD R+E++ ++ L +V+
Sbjct: 88 RKKRYHR--HTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVK 133
>02_01_0451 - 3237849-3238061,3238142-3238268,3238418-3238656,
3238937-3239151,3239569-3240031,3240562-3240715,
3241724-3241833,3242540-3242797,3242843-3242854,
3243492-3243545,3244202-3244312,3244390-3244545,
3244798-3245201,3245405-3245501,3246041-3246050,
3246097-3246164,3246652-3246762,3246874-3247074,
3247384-3247485,3247980-3248087,3248209-3248411,
3248563-3248680,3248774-3248854,3248958-3249500,
3249602-3249730
Length = 1428
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 24 TGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDL 83
+ L ++ + E SLT K R R T+ +L +L+R F+ P+ Y R+ +K L
Sbjct: 1292 SALVFQQRNTSEPSLTPKLADARKRIYDTAIRLGKLQREFKVPVDPEEYARDN--LKFGL 1349
Query: 84 TEARVQVAK 92
E + AK
Sbjct: 1350 VEVVYEWAK 1358
>04_04_1231 -
31934745-31935125,31935230-31935325,31936215-31936277,
31936393-31936593,31936738-31936839,31936972-31937430,
31937524-31937712,31938325-31938442,31939033-31939307,
31939853-31939930
Length = 653
Score = 29.1 bits (62), Expect = 0.56
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
RK+R R T Q++E+E F+E +PD R+E++ ++ L +V+
Sbjct: 101 RKKRYHR--HTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVK 146
>01_06_0212 +
27575406-27575604,27575723-27576241,27576371-27576387
Length = 244
Score = 29.1 bits (62), Expect = 0.56
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
EK +R +++ + QL+ LE+ + YP R E++ KI L++ ++Q+
Sbjct: 45 EKTVKRMMKSPY---QLEVLEKTYAVEQYPSETLRAELSAKIGLSDRQLQM 92
>01_06_0787 -
31999632-32000045,32000128-32000214,32000295-32000584,
32000670-32000844,32000930-32001142,32001227-32001328,
32001418-32001822,32001922-32002134,32002312-32002357,
32002602-32002867,32003936-32004012,32004095-32004170,
32004339-32004418,32004945-32005036,32005132-32005171,
32005301-32005400,32005815-32005962,32006071-32006153,
32006207-32006383
Length = 1027
Score = 28.3 bits (60), Expect = 0.98
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 21 ESQTGLPYKVYGSHE---GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREE 76
+SQ+G G H+ G + K+++R+ T+ Q++ +E F+E+ +PD R++
Sbjct: 337 QSQSGGGSGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQ 395
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K+ T + Q++ LER + E YP E A + LT +V++
Sbjct: 427 KRENTGTKKSPLQIQMLERFYSEVQYPQSEDIAEYATSVGLTYNQVRI 474
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 26.6 bits (56), Expect = 3.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 18 IYSESQTGLPYKVYGSHEGSLTE 40
+ E++TGLPY + +H+ TE
Sbjct: 2675 VNQENETGLPYDIVVTHKSGFTE 2697
>01_06_0848 +
32426550-32426613,32427013-32427167,32428470-32428526,
32428877-32428930,32429349-32429418,32429951-32432034
Length = 827
Score = 26.6 bits (56), Expect = 3.0
Identities = 15/83 (18%), Positives = 34/83 (40%)
Query: 5 FVEAGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQ 64
++ + EI + +S S + PY V H+ + +K R + F +K+L +
Sbjct: 407 YMSSEEIESILRMQHSASHSSDPYVVDYYHQACIAKKGASSRQKANFAPTSMKDLPSKSR 466
Query: 65 ETHYPDIYTREEIAMKIDLTEAR 87
+ Y + + ++ + R
Sbjct: 467 SSSDHHAYLQVDALGRVSFSSIR 489
>12_01_0029 +
248725-248769,248870-249074,250040-250128,250237-250315,
250429-250556,250764-250862,250953-251061,251301-251380,
251464-251691,251768-251833,251970-252086,252538-252735,
252847-252963,253056-253115,253228-253314,253419-253502,
253623-253757,253837-253899,253979-254083,254174-254286,
254374-254626,254715-254851,254970-255248,255352-256354,
256450-256935,257023-257193,257285-257470,257820-257942,
258024-258134,258225-258395
Length = 1708
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 47 IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87
I + Q+KE+ER +E+++ D + M+ L +AR
Sbjct: 746 IEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDAR 786
>11_04_0332 +
16465360-16465769,16465873-16466272,16466379-16466423,
16467113-16467139,16467201-16467266,16467889-16467950,
16468049-16468123,16468218-16468383,16468611-16468734,
16469737-16469843,16469992-16470102
Length = 530
Score = 26.2 bits (55), Expect = 4.0
Identities = 7/26 (26%), Positives = 20/26 (76%)
Query: 5 FVEAGEINCKIHRIYSESQTGLPYKV 30
+VE+GE++C++++ ++ G+P+ +
Sbjct: 419 YVESGELSCQMYQRSADMGLGVPFNI 444
>11_01_0030 +
233285-233329,233439-233643,234637-234725,234834-234912,
235048-235175,235383-235481,235572-235680,235920-235999,
236083-236310,236387-236452,236589-236705,237142-237339,
237451-237567,237660-237719,237832-237918,238023-238106,
238233-238367,238446-238508,238588-238692,238781-238893,
238981-239233,239322-239458,239577-239855,239958-240960,
241054-241539,241627-241797,241890-242075,242426-242548,
242630-242740,242834-243004
Length = 1708
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 47 IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87
I + Q+KE+ER +E+++ D + M+ L +AR
Sbjct: 746 IEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDAR 786
>10_08_1025 -
22391267-22391767,22392641-22392736,22392838-22393106,
22393257-22393431,22393503-22393718,22393819-22393926,
22394020-22394544,22394631-22394819,22394924-22395041,
22395172-22395437,22395521-22395658
Length = 866
Score = 26.2 bits (55), Expect = 4.0
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
G+ G+ +KR R T+ Q++++E F+E +PD R +++ ++ L +V+
Sbjct: 111 GAAGGNAKKKRYHRH-----TAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQVK 163
>06_03_0934 -
26073084-26073220,26073296-26073345,26073465-26073634,
26073651-26073803,26073877-26074032,26074227-26074350,
26075066-26075178,26076336-26076469,26077391-26077578,
26077718-26078139
Length = 548
Score = 26.2 bits (55), Expect = 4.0
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 6/33 (18%)
Query: 9 GEINCKIHRIYSESQTGLPYKVYGSHEGSLTEK 41
G+I CK HR Y ES K +G+ S EK
Sbjct: 137 GDIECKQHRFYGES------KPFGNESNSSPEK 163
>08_02_0670 - 19877091-19877618,19880033-19880436,19880505-19880622
Length = 349
Score = 25.8 bits (54), Expect = 5.3
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQRRI---RTTFTSAQLKELERAFQETHYPDIYTREE 76
S + G + +HE L E+ + + T+ Q++ LER+F+E + + + E
Sbjct: 56 SAAGAGAKRPFFTTHEELLEEEYYDEQAPEKKRRLTAEQVQMLERSFEEENKLEPERKTE 115
Query: 77 IAMKIDLTEARVQV 90
+A ++ + +V V
Sbjct: 116 LARRLGMAPRQVAV 129
>03_01_0533 -
3984158-3984364,3984541-3984711,3985158-3985226,
3985316-3985428,3985586-3985723,3987090-3987111
Length = 239
Score = 25.8 bits (54), Expect = 5.3
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREE 76
++S +G P +V G EGSL E+ Q +T + ++ A +Y E
Sbjct: 28 TQSTSGSPREVSGMSEGSLNEQNDQSGNLDGYTKSDEGKMMSALSLGKSETVYAHSE 84
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELE 60
EG L+ + + +RI+ F AQ KEL+
Sbjct: 473 EGKLSRQAELQRIKNQFGEAQAKELK 498
>08_02_1180 +
24980042-24980784,24980874-24981168,24981650-24981823,
24981999-24982187,24982290-24982403,24982517-24982837,
24983485-24983542,24984216-24984337
Length = 671
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTR-EEIAMKIDLTEARVQ 89
++T T ++ E+E + P +Y R EE+ KID E ++
Sbjct: 136 QSTGTDDEIPEIEEKIVDDEKPVVYQRNEELQSKIDKLEQELR 178
>04_02_0017 -
8572400-8572732,8572818-8572919,8573138-8573230,
8573391-8573519,8573781-8574025,8574184-8574453,
8574590-8574752,8575965-8576063
Length = 477
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+G+L E+ ++ +Q++EL + QE+ + ++++A K T A++ +
Sbjct: 414 KGTLKEQLAAEKLAKDDLKSQVQELAKKLQESEQARVAEQQDMARKQAETNAKLDL 469
>02_03_0415 +
18805541-18805610,18805962-18806128,18806616-18806645,
18807459-18807515,18808268-18808337,18808915-18810998
Length = 825
Score = 25.4 bits (53), Expect = 6.9
Identities = 14/83 (16%), Positives = 34/83 (40%)
Query: 5 FVEAGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQ 64
++ + EI + +S S + PY V H+ + ++ R + F +K+L +
Sbjct: 405 YMSSEEIESILRMQHSASHSSDPYVVDYYHQACIAKRGANSRPKANFAPTSMKDLPSKSR 464
Query: 65 ETHYPDIYTREEIAMKIDLTEAR 87
+ Y + + ++ + R
Sbjct: 465 SSGDHHAYLQVDAVGRVSFSSIR 487
>01_01_0981 + 7766025-7766753
Length = 242
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 9 GEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIR 48
G +C+ H I + + Y SH+G + E+R++R R
Sbjct: 192 GCAHCRRH-IGIQHSSHCSMACYNSHQGEVAERRRRREAR 230
>12_02_1269 + 27462644-27463612
Length = 322
Score = 25.0 bits (52), Expect = 9.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 58 ELERAFQETHYPDIYTREEIAMKIDLTEARVQVAKE 93
EL R F ET I E+I IDLT R + K+
Sbjct: 260 ELRRLFIETTGKSIIVIEDIDCSIDLTGKRKKKKKD 295
>12_02_1268 + 27458823-27460046
Length = 407
Score = 25.0 bits (52), Expect = 9.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 58 ELERAFQETHYPDIYTREEIAMKIDLTEARVQVAKE 93
EL R F ET I E+I IDLT R + K+
Sbjct: 186 ELRRLFIETTGKSIIVIEDIDCSIDLTGKRKKKKKD 221
>12_02_0191 +
15178717-15179045,15179147-15179546,15179624-15179668,
15180506-15180571,15181829-15181890,15182161-15182326,
15183384-15183507,15184177-15184283,15184395-15184505
Length = 469
Score = 25.0 bits (52), Expect = 9.2
Identities = 7/26 (26%), Positives = 19/26 (73%)
Query: 5 FVEAGEINCKIHRIYSESQTGLPYKV 30
+VE GE++C++++ ++ G+P+ +
Sbjct: 358 YVENGELSCQMYQRSADMGLGVPFNI 383
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 25.0 bits (52), Expect = 9.2
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 48 RTTFTSAQLKELERAFQETHY 68
++ +TSA+LK+ E + ETHY
Sbjct: 644 KSLYTSARLKKGEVIYLETHY 664
>01_03_0217 +
13879259-13879270,13880322-13880683,13880771-13880855
Length = 152
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDI 71
KRK ++IRT+ T + K L++A ++ YP +
Sbjct: 30 KRKSKKIRTSVTFHRPKTLKKA-RDPKYPRV 59
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,223,237
Number of Sequences: 37544
Number of extensions: 69774
Number of successful extensions: 228
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 198
Number of HSP's gapped (non-prelim): 33
length of query: 96
length of database: 14,793,348
effective HSP length: 70
effective length of query: 26
effective length of database: 12,165,268
effective search space: 316296968
effective search space used: 316296968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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