BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001200-TA|BGIBMGA001200-PA|IPR001356|Homeobox, IPR009057|Homeodomain-like (96 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-19 SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 83 3e-17 SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 7e-16 SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 3e-15 SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-15 SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-15 SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 1e-14 SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 8e-14 SB_16448| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-13 SB_28488| Best HMM Match : PAX (HMM E-Value=0) 69 6e-13 SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 8e-13 SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 8e-13 SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-12 SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28) 68 1e-12 SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-12 SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-11 SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-11 SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-11 SB_16319| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 9e-11 SB_54939| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 2e-10 SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09) 61 2e-10 SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30) 60 3e-10 SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 4e-10 SB_10425| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-10 SB_5296| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-09 SB_48493| Best HMM Match : Homeobox (HMM E-Value=6.3e-08) 54 2e-08 SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29) 52 7e-08 SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 7e-07 SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29) 48 1e-06 SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26) 48 2e-06 SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45) 48 2e-06 SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 48 2e-06 SB_5495| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-06 SB_21212| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-06 SB_11048| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 46 5e-06 SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30) 46 5e-06 SB_49340| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 46 5e-06 SB_18861| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 46 5e-06 SB_17558| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 46 5e-06 SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28) 45 8e-06 SB_42150| Best HMM Match : Homeobox (HMM E-Value=1.8e-29) 45 1e-05 SB_174| Best HMM Match : Homeobox (HMM E-Value=1.9e-19) 45 1e-05 SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-05 SB_17425| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) 44 1e-05 SB_6972| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) 44 1e-05 SB_6712| Best HMM Match : Homeobox (HMM E-Value=8e-06) 44 2e-05 SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32) 44 2e-05 SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-05 SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28) 43 3e-05 SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29) 42 6e-05 SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30) 42 6e-05 SB_11047| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) 42 6e-05 SB_15284| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) 42 6e-05 SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27) 42 8e-05 SB_8061| Best HMM Match : Homeobox (HMM E-Value=5.1e-27) 42 8e-05 SB_5629| Best HMM Match : PAX (HMM E-Value=0) 42 8e-05 SB_45591| Best HMM Match : Homeobox (HMM E-Value=7.3e-18) 42 8e-05 SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30) 42 1e-04 SB_22129| Best HMM Match : Homeobox (HMM E-Value=4.6e-26) 41 1e-04 SB_53176| Best HMM Match : Homeobox (HMM E-Value=0) 41 1e-04 SB_31530| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 1e-04 SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 1e-04 SB_22870| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 2e-04 SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30) 40 2e-04 SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23) 40 3e-04 SB_36166| Best HMM Match : Homeobox (HMM E-Value=2.6e-28) 40 3e-04 SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24) 40 3e-04 SB_45690| Best HMM Match : Homeobox (HMM E-Value=4.6e-31) 40 4e-04 SB_16156| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 4e-04 SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25) 39 7e-04 SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 7e-04 SB_10405| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.001 SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.001 SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32) 38 0.001 SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27) 38 0.002 SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002 SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002 SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.002 SB_45417| Best HMM Match : Homeobox (HMM E-Value=5.1e-09) 37 0.003 SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 37 0.003 SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.004 SB_8775| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.005 SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 36 0.007 SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30) 36 0.007 SB_58034| Best HMM Match : VWA (HMM E-Value=0) 36 0.007 SB_41100| Best HMM Match : Homeobox (HMM E-Value=1.5e-24) 36 0.007 SB_14196| Best HMM Match : FG-GAP (HMM E-Value=0) 36 0.007 SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.007 SB_25357| Best HMM Match : Homeobox (HMM E-Value=8.3e-28) 35 0.012 SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) 34 0.016 SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) 34 0.016 SB_21878| Best HMM Match : Homeobox (HMM E-Value=1.5e-25) 34 0.021 SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) 34 0.021 SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.021 SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 34 0.021 SB_29536| Best HMM Match : Homeobox (HMM E-Value=2.6e-30) 33 0.036 SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.083 SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.083 SB_3427| Best HMM Match : Homeobox (HMM E-Value=4e-24) 32 0.083 SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25) 31 0.11 SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.19 SB_40884| Best HMM Match : Homeobox (HMM E-Value=0.068) 31 0.19 SB_4113| Best HMM Match : Homeobox (HMM E-Value=1.7e-05) 30 0.25 SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20) 30 0.25 SB_3426| Best HMM Match : Homeobox (HMM E-Value=3.4e-22) 30 0.25 SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 30 0.25 SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26) 30 0.34 SB_10703| Best HMM Match : Homeobox (HMM E-Value=4.6e-08) 29 0.44 SB_18736| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.59 SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.77 SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 29 0.77 SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.77 SB_52899| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4 SB_15916| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4 SB_4833| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.4 SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 1.8 SB_18528| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) 27 1.8 SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16) 27 1.8 SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20) 27 2.4 SB_28259| Best HMM Match : Filament (HMM E-Value=0.2) 27 2.4 SB_56769| Best HMM Match : UIM (HMM E-Value=0.0025) 27 2.4 SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22) 27 2.4 SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 27 3.1 SB_31379| Best HMM Match : Pou (HMM E-Value=0) 27 3.1 SB_34025| Best HMM Match : Homeobox (HMM E-Value=1.1e-35) 26 4.1 SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0) 26 5.5 SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) 26 5.5 SB_10085| Best HMM Match : Sod_Fe_N (HMM E-Value=1.4) 26 5.5 SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05) 25 7.2 SB_36832| Best HMM Match : DTHCT (HMM E-Value=9.3) 25 7.2 SB_2889| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 7.2 SB_1137| Best HMM Match : CC (HMM E-Value=2) 25 7.2 SB_37865| Best HMM Match : IL12 (HMM E-Value=6.1) 25 9.5 SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 9.5 >SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 496 Score = 89.0 bits (211), Expect = 5e-19 Identities = 41/52 (78%), Positives = 47/52 (90%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 T KRKQRR RTTFTS QL+ELERAF +THYPD++TRE +A+KIDLTEARVQV Sbjct: 281 TAKRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREALAVKIDLTEARVQV 332 >SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) Length = 1168 Score = 83.0 bits (196), Expect = 3e-17 Identities = 37/58 (63%), Positives = 47/58 (81%) Query: 33 SHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 S G KRK+RR RTTFT+ QL+E+ER FQ+THYPD+YTRE++A++ LTEARVQV Sbjct: 393 SDSGDSAPKRKKRRNRTTFTAYQLEEMERVFQKTHYPDVYTREQLALRCALTEARVQV 450 >SB_16449| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 78.6 bits (185), Expect = 7e-16 Identities = 35/52 (67%), Positives = 44/52 (84%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + K+K RR RTTFT+ QL ELERAF+++HYPD+YTREE+A+KI L E RVQV Sbjct: 80 SSKKKLRRNRTTFTTFQLHELERAFEKSHYPDVYTREELALKISLPEVRVQV 131 >SB_16450| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 286 Score = 76.6 bits (180), Expect = 3e-15 Identities = 38/62 (61%), Positives = 49/62 (79%), Gaps = 3/62 (4%) Query: 32 GSHEGSLTEK---RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88 GS E S E RK RR RTTFT+ QL +LERAF++T YPD++TREE+A+++DL+EARV Sbjct: 77 GSGEESAGEDGKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARV 136 Query: 89 QV 90 QV Sbjct: 137 QV 138 >SB_21036| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 243 Score = 76.2 bits (179), Expect = 4e-15 Identities = 38/77 (49%), Positives = 52/77 (67%), Gaps = 1/77 (1%) Query: 15 IHRIYSESQTGLPYKVYGSH-EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYT 73 ++R Y + +GS E T +RKQRR RTTFT QL+ELE+ F++ HYPDI Sbjct: 38 VYRSYQDHPDQSHTPDHGSDSENPATVRRKQRRNRTTFTKQQLQELEKVFEKKHYPDIAL 97 Query: 74 REEIAMKIDLTEARVQV 90 REE+A KI+++EAR+QV Sbjct: 98 REELAAKINISEARIQV 114 >SB_39292| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 707 Score = 75.4 bits (177), Expect = 7e-15 Identities = 35/63 (55%), Positives = 47/63 (74%) Query: 27 PYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 86 P +++ S + RKQRR RT FTS Q+ ELE+AF +T YPD+YTREE+A +++LTEA Sbjct: 4 PSRMHFSLDPDFLLTRKQRRSRTKFTSKQVDELEKAFLKTQYPDVYTREELAQRLNLTEA 63 Query: 87 RVQ 89 RVQ Sbjct: 64 RVQ 66 Score = 70.5 bits (165), Expect = 2e-13 Identities = 32/48 (66%), Positives = 39/48 (81%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K RR RT FT +Q ELERAF++THYPDIY REE+A ++ L+EARVQV Sbjct: 547 KPRRSRTRFTVSQTDELERAFRKTHYPDIYAREELAQRLGLSEARVQV 594 >SB_22965| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 311 Score = 74.5 bits (175), Expect = 1e-14 Identities = 31/61 (50%), Positives = 49/61 (80%) Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVAKEL 94 E + ++K K+RR RT FT+ QL+ELE+AF+E+HYPD+Y RE +++KIDL E R+Q+ + + Sbjct: 87 EKASSKKAKKRRHRTIFTNYQLEELEKAFKESHYPDVYARENLSLKIDLPEDRIQIRRAV 146 Query: 95 R 95 + Sbjct: 147 Q 147 >SB_54937| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 189 Score = 71.7 bits (168), Expect = 8e-14 Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 1/59 (1%) Query: 32 GSHEGSLT-EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 G E T +KRK RR RTTFT QL+ LE+ F+++HYPD+ TREE+A KID++EARVQ Sbjct: 96 GKDEDPATNQKRKLRRNRTTFTPDQLEMLEKEFEKSHYPDVATREELANKIDMSEARVQ 154 >SB_16448| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 307 Score = 71.3 bits (167), Expect = 1e-13 Identities = 32/52 (61%), Positives = 40/52 (76%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++ KQ+R RT FT AQL ELER F THYPD++ REE+A +I LTE+RVQV Sbjct: 85 SQAAKQKRHRTRFTPAQLNELERCFARTHYPDVFMREELAARIGLTESRVQV 136 >SB_28488| Best HMM Match : PAX (HMM E-Value=0) Length = 551 Score = 68.9 bits (161), Expect = 6e-13 Identities = 31/47 (65%), Positives = 38/47 (80%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 K RR RT FT +Q ELERAF++THYPDIY REE+A ++ L+EARVQ Sbjct: 505 KPRRSRTRFTVSQTDELERAFRKTHYPDIYAREELAQRLGLSEARVQ 551 >SB_47477| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 632 Score = 68.5 bits (160), Expect = 8e-13 Identities = 32/52 (61%), Positives = 41/52 (78%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVAKE 93 RKQRR RTTFT QL+ LE F +T YPDI+ REE+A+KI+L E+RVQ +K+ Sbjct: 437 RKQRRERTTFTKNQLEILEELFAKTRYPDIFMREEVAIKINLPESRVQSSKQ 488 >SB_21452| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 275 Score = 68.5 bits (160), Expect = 8e-13 Identities = 33/71 (46%), Positives = 45/71 (63%) Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAM 79 S S TG + K+K+ R RTTF+ Q++ELERAF + YPD++ REE+A Sbjct: 39 SPSTTGSENVDIDEDSSANAAKKKKTRYRTTFSQYQIEELERAFDKAPYPDVFAREELAA 98 Query: 80 KIDLTEARVQV 90 K+ LTEAR+QV Sbjct: 99 KLGLTEARIQV 109 >SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 233 Score = 68.1 bits (159), Expect = 1e-12 Identities = 32/49 (65%), Positives = 39/49 (79%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RKQRR RTTFT QL+ LE F +T YPDI+ REE+A+KI+L E+RVQV Sbjct: 41 RKQRRERTTFTKNQLEVLEELFAKTRYPDIFMREEVAIKINLPESRVQV 89 >SB_37079| Best HMM Match : Homeobox (HMM E-Value=1.2e-28) Length = 246 Score = 67.7 bits (158), Expect = 1e-12 Identities = 32/49 (65%), Positives = 39/49 (79%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RKQRR RTTFT QL+ LE F +T YPDI+ REE+A+KI+L E+RVQV Sbjct: 56 RKQRRERTTFTKNQLEILEELFAKTRYPDIFMREEVAIKINLPESRVQV 104 >SB_34509| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 212 Score = 66.9 bits (156), Expect = 2e-12 Identities = 29/52 (55%), Positives = 40/52 (76%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++ +++RR RT FT QL+ LE FQ+THYPD+ REE+AMK+DL E RV+V Sbjct: 69 SQPKRKRRHRTIFTEEQLELLETTFQKTHYPDVLLREELAMKVDLKEERVEV 120 >SB_52575| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1267 Score = 64.1 bits (149), Expect = 2e-11 Identities = 32/58 (55%), Positives = 41/58 (70%) Query: 33 SHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++E +KRKQRR RT FTS QL++LE F YPD+ REEIA+ +LTEARV+V Sbjct: 730 NNESEELKKRKQRRQRTHFTSFQLQQLEGTFGRNRYPDMQMREEIALYTNLTEARVRV 787 Score = 62.1 bits (144), Expect = 7e-11 Identities = 28/53 (52%), Positives = 37/53 (69%) Query: 38 LTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + + RK RR RTTF QL LERAF THYPD+ RE++A+ +L E+R+QV Sbjct: 1102 VADGRKIRRTRTTFNQFQLDTLERAFSRTHYPDVLLREQLAVYTNLPESRIQV 1154 >SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 611 Score = 63.7 bits (148), Expect = 2e-11 Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 6/64 (9%) Query: 32 GSHEG------SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTE 85 GSH G + + RR RT FT Q+++LE+ F++THYPD++TRE +A +++L+E Sbjct: 310 GSHSGDEGDDPNSQRSKMSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREGLAQQVNLSE 369 Query: 86 ARVQ 89 AR+Q Sbjct: 370 ARIQ 373 >SB_39161| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2103 Score = 62.5 bits (145), Expect = 5e-11 Identities = 26/48 (54%), Positives = 37/48 (77%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K+RR RT F S QL+ELE+ + YPD++TRE +A+K+DL E+R+QV Sbjct: 319 KRRRSRTNFDSWQLEELEKIYHHNQYPDVFTREALALKLDLLESRIQV 366 >SB_16319| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 209 Score = 61.7 bits (143), Expect = 9e-11 Identities = 27/47 (57%), Positives = 36/47 (76%) Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +RR RTTF+ QL LE AF + YPD++TRE++A +I+L EARVQV Sbjct: 158 KRRHRTTFSKLQLDSLEEAFSRSQYPDVFTREQLAKRINLNEARVQV 204 >SB_54939| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 341 Score = 60.9 bits (141), Expect = 2e-10 Identities = 27/50 (54%), Positives = 36/50 (72%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K+K RR+RT FT QL+ LE F THYPD+ RE++A ++L EAR+QV Sbjct: 146 KKKPRRMRTCFTPYQLQVLENTFCNTHYPDVMLREQLASYVNLPEARIQV 195 >SB_51509| Best HMM Match : Homeobox (HMM E-Value=2.3e-09) Length = 53 Score = 60.9 bits (141), Expect = 2e-10 Identities = 25/47 (53%), Positives = 36/47 (76%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 K+RR RT F S QL+ELE+ + YPD++TRE +A+K+DL E+R+Q Sbjct: 7 KRRRSRTNFDSWQLEELEKIYHHNQYPDVFTREALALKLDLLESRIQ 53 >SB_49289| Best HMM Match : Homeobox (HMM E-Value=6e-30) Length = 285 Score = 60.1 bits (139), Expect = 3e-10 Identities = 27/48 (56%), Positives = 35/48 (72%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K R R FT QL++LER F++THYPD TRE +A K+ L+EARVQ+ Sbjct: 115 KAPRNRKNFTGDQLRDLERLFEQTHYPDAMTREGLAKKLGLSEARVQI 162 >SB_10426| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 318 Score = 59.7 bits (138), Expect = 4e-10 Identities = 26/50 (52%), Positives = 34/50 (68%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +R RR RT FT QL LE+ F +THYPD+ RE++A +L EAR+QV Sbjct: 64 RRGSRRTRTAFTHQQLTALEKVFSKTHYPDVEVREQLATSTNLQEARIQV 113 >SB_10425| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 293 Score = 59.3 bits (137), Expect = 5e-10 Identities = 28/57 (49%), Positives = 38/57 (66%), Gaps = 2/57 (3%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 H GS + K RR RT FT QL+ LE F +THYPD+ RE++A I++ E+R+QV Sbjct: 48 HYGS--SRAKHRRTRTAFTHQQLQILESTFSKTHYPDVVMREQLAAYINIPESRIQV 102 >SB_5296| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 266 Score = 55.2 bits (127), Expect = 8e-09 Identities = 24/47 (51%), Positives = 35/47 (74%) Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 QRR RT FT+ QL++LE A+Q+ YPD+ RE +A ++ + E+RVQV Sbjct: 220 QRRNRTKFTAYQLEQLEDAYQKAKYPDVQARETLAQRLGVAESRVQV 266 >SB_48493| Best HMM Match : Homeobox (HMM E-Value=6.3e-08) Length = 121 Score = 53.6 bits (123), Expect = 2e-08 Identities = 25/52 (48%), Positives = 34/52 (65%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 T ++RR+RT+F QL LE AF +THYP IY R+++A L E R+QV Sbjct: 18 TAVTRRRRVRTSFADWQLCALESAFAQTHYPPIYERDQLAGYTGLPEERIQV 69 >SB_41873| Best HMM Match : Homeobox (HMM E-Value=2.3e-29) Length = 651 Score = 52.0 bits (119), Expect = 7e-08 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 2/60 (3%) Query: 31 YGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + GS +KRK R RT F++ QLK+LE+ FQ HY R++IA +DL+EA+V+V Sbjct: 533 FSDDSGSYVQKRK--RARTAFSAEQLKKLEKRFQANHYIVGEERQKIAKDLDLSEAQVKV 590 >SB_48629| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 242 Score = 48.8 bits (111), Expect = 7e-07 Identities = 24/51 (47%), Positives = 34/51 (66%) Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +K K+R+ RT FT+ QL+ELE F +Y R EIA+ +DLTE +V+V Sbjct: 141 QKGKKRKERTAFTTHQLRELENEFTRNNYLTRLRRYEIAVSLDLTERQVKV 191 >SB_41749| Best HMM Match : Homeobox (HMM E-Value=4.1e-29) Length = 269 Score = 48.0 bits (109), Expect = 1e-06 Identities = 19/46 (41%), Positives = 31/46 (67%) Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +R R TF AQ+ ++ER F HYPD+ R E++ + L+E++VQ+ Sbjct: 75 KRYRATFDKAQIFQMERVFLLNHYPDVAARSELSRRTGLSESQVQI 120 >SB_42639| Best HMM Match : Homeobox (HMM E-Value=1e-26) Length = 225 Score = 47.6 bits (108), Expect = 2e-06 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 6/94 (6%) Query: 2 ETLFVEAGEI--NCKIHR-IYSESQTGLPYKVYGSHEGSLTEK---RKQRRIRTTFTSAQ 55 E LF+ G++ + +IH +SE G + + + K K RR RT FTS+Q Sbjct: 51 ENLFLIVGDVVDDFRIHDDAHSEDGAGESAEYQHDPDSPYSHKSHMNKSRRRRTAFTSSQ 110 Query: 56 LKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 LK LE FQE Y I R +A + LT +V+ Sbjct: 111 LKSLEEKFQEKKYLTISERNSLAKSMHLTNTQVK 144 >SB_20497| Best HMM Match : Homeobox (HMM E-Value=1.4013e-45) Length = 527 Score = 47.6 bits (108), Expect = 2e-06 Identities = 23/48 (47%), Positives = 32/48 (66%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K+R+ RT FT Q++ELE FQ +Y R EIA+ +DLTE +V+V Sbjct: 91 KKRKERTAFTKHQIQELENEFQRNNYLTRLRRYEIAVSLDLTERQVKV 138 Score = 41.5 bits (93), Expect = 1e-04 Identities = 22/51 (43%), Positives = 31/51 (60%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVA 91 K ++R+ RT F+ QL ELER F +Y R EIA+ +DL E +V+ A Sbjct: 347 KSRKRKERTVFSKYQLTELEREFCRNNYLTRLRRYEIAVSLDLGERQVKEA 397 >SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) Length = 1064 Score = 47.6 bits (108), Expect = 2e-06 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 6/94 (6%) Query: 2 ETLFVEAGEI--NCKIHR-IYSESQTGLPYKVYGSHEGSLTEK---RKQRRIRTTFTSAQ 55 E LF+ G++ + +IH +SE G + + + K K RR RT FTS+Q Sbjct: 890 ENLFLIVGDVVDDFRIHDDAHSEDGAGESAEYQHDPDSPYSHKSHMNKSRRRRTAFTSSQ 949 Query: 56 LKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 LK LE FQE Y I R +A + LT +V+ Sbjct: 950 LKSLEEKFQEKKYLTISERNSLAKSMHLTNTQVK 983 >SB_5495| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 247 Score = 47.2 bits (107), Expect = 2e-06 Identities = 20/52 (38%), Positives = 33/52 (63%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 T K +QRR RT +T +QL+ +E F+ +P I RE ++ ++ + E R+QV Sbjct: 16 TAKARQRRRRTFYTDSQLRRMEEVFERDRFPGIAARESLSEELGIKEDRLQV 67 >SB_21212| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 249 Score = 46.4 bits (105), Expect = 4e-06 Identities = 22/49 (44%), Positives = 31/49 (63%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 ++ RR RTTFT QL+ +E F YP I RE +A KI ++E+R+Q Sbjct: 74 RKSHRRKRTTFTHDQLQLMEAYFHNNRYPGIEQREGLAEKIQVSESRLQ 122 >SB_11048| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) Length = 193 Score = 46.0 bits (104), Expect = 5e-06 Identities = 22/57 (38%), Positives = 33/57 (57%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 H ++ RR RT F+ Q LE AFQ +P I RE++A ++D+ E+R+QV Sbjct: 19 HSVPSNPRKSHRRQRTFFSKEQTVILEGAFQYERFPGIQIREKLARELDIDESRIQV 75 >SB_49708| Best HMM Match : Homeobox (HMM E-Value=8.1e-30) Length = 197 Score = 46.0 bits (104), Expect = 5e-06 Identities = 22/59 (37%), Positives = 35/59 (59%) Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 GS R+ +RIRT FT QL LE AF++ HY R+++A ++L+E +++V Sbjct: 79 GSLHNGFVACRRPKRIRTAFTPTQLLHLENAFEKNHYIVGTERKQLASYLNLSETQIKV 137 >SB_49340| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) Length = 193 Score = 46.0 bits (104), Expect = 5e-06 Identities = 22/57 (38%), Positives = 33/57 (57%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 H ++ RR RT F+ Q LE AFQ +P I RE++A ++D+ E+R+QV Sbjct: 19 HSVPSNPRKSHRRQRTFFSKEQTVILEGAFQYERFPGIQIREKLARELDIDESRIQV 75 >SB_18861| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) Length = 193 Score = 46.0 bits (104), Expect = 5e-06 Identities = 22/57 (38%), Positives = 33/57 (57%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 H ++ RR RT F+ Q LE AFQ +P I RE++A ++D+ E+R+QV Sbjct: 19 HSVPSNPRKSHRRQRTFFSKEQTVILEGAFQYERFPGIQIREKLARELDIDESRIQV 75 >SB_17558| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) Length = 193 Score = 46.0 bits (104), Expect = 5e-06 Identities = 22/57 (38%), Positives = 33/57 (57%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 H ++ RR RT F+ Q LE AFQ +P I RE++A ++D+ E+R+QV Sbjct: 19 HSVPSNPRKSHRRQRTFFSKEQTVILEGAFQYERFPGIQIREKLARELDIDESRIQV 75 >SB_24287| Best HMM Match : Homeobox (HMM E-Value=9e-28) Length = 561 Score = 45.2 bits (102), Expect = 8e-06 Identities = 23/47 (48%), Positives = 30/47 (63%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 K RR RT FTS+QLK LE FQE Y I R E+A + L++ +V+ Sbjct: 432 KSRRKRTAFTSSQLKYLEEKFQEKKYLTISERNELAKSMYLSDTQVK 478 >SB_42150| Best HMM Match : Homeobox (HMM E-Value=1.8e-29) Length = 122 Score = 44.8 bits (101), Expect = 1e-05 Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%) Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 G E +L+ ++R+ RT FTS QL +LER F Y + R IA ++LTE +V++ Sbjct: 14 GDGEDALSSASRRRK-RTAFTSKQLLQLEREFHNKKYVSLEERSVIATNLNLTEVQVKI 71 >SB_174| Best HMM Match : Homeobox (HMM E-Value=1.9e-19) Length = 149 Score = 44.8 bits (101), Expect = 1e-05 Identities = 21/46 (45%), Positives = 30/46 (65%) Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RR RT F+ Q LE AFQ +P I RE++A ++D+ E+R+QV Sbjct: 3 RRQRTFFSKEQTVILEEAFQYERFPGIQIREKLARELDIDESRIQV 48 >SB_48630| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 228 Score = 44.4 bits (100), Expect = 1e-05 Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 G T KRK+R T F+ QL+ELE F +Y R EIA+ +DLTE +V+V Sbjct: 137 GKTTRKRKER---TAFSKHQLQELENEFIRNNYLTRLRRYEIAVSLDLTERQVKV 188 >SB_17425| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) Length = 387 Score = 44.4 bits (100), Expect = 1e-05 Identities = 21/56 (37%), Positives = 32/56 (57%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 H ++ RR RT F+ Q LE AFQ +P I RE++A ++D+ E+R+Q Sbjct: 19 HSVPSNPRKSHRRQRTFFSKEQTVILEGAFQYERFPGIQIREKLARELDIDESRIQ 74 >SB_6972| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) Length = 74 Score = 44.4 bits (100), Expect = 1e-05 Identities = 21/56 (37%), Positives = 32/56 (57%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 H ++ RR RT F+ Q LE AFQ +P I RE++A ++D+ E+R+Q Sbjct: 19 HSVPSNPRKSHRRQRTFFSKEQTVILEGAFQYERFPGIQIREKLARELDIDESRIQ 74 >SB_6712| Best HMM Match : Homeobox (HMM E-Value=8e-06) Length = 169 Score = 44.0 bits (99), Expect = 2e-05 Identities = 21/45 (46%), Positives = 28/45 (62%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87 K+RR RT F++ QL LE FQ+ H+PD R+ IA + L E R Sbjct: 105 KRRRCRTVFSTEQLAILEEGFQKQHFPDNKLRQAIATRAGLPEDR 149 >SB_596| Best HMM Match : Homeobox (HMM E-Value=4.5e-32) Length = 162 Score = 44.0 bits (99), Expect = 2e-05 Identities = 18/47 (38%), Positives = 32/47 (68%) Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++R RT FT+ Q+K+LE FQ++ Y + R E+A + LTE ++++ Sbjct: 26 KKRPRTAFTNEQIKDLEAEFQKSKYLSVSRRMELANSLSLTETQIKI 72 >SB_29192| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 695 Score = 43.6 bits (98), Expect = 3e-05 Identities = 20/48 (41%), Positives = 31/48 (64%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + +RIRT +TS QL ELE+ F + Y R +IA +DL+E +V++ Sbjct: 300 RSKRIRTAYTSMQLLELEKEFSQNRYLSRLRRIQIAALLDLSEKQVKI 347 >SB_18749| Best HMM Match : Homeobox (HMM E-Value=6.1e-28) Length = 222 Score = 43.2 bits (97), Expect = 3e-05 Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Query: 21 ESQTGLPYK--VYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIA 78 +S LP K G + + + +K+++ RTTFT Q+ ELE+ F+ Y R ++A Sbjct: 84 KSHNSLPKKSATKGKGDKEIGKCKKKKKARTTFTGRQIFELEKQFEAKKYLTATERSDMA 143 Query: 79 MKIDLTEARVQV 90 +++TE +V++ Sbjct: 144 SLLNVTETQVKI 155 >SB_57651| Best HMM Match : Homeobox (HMM E-Value=3e-29) Length = 294 Score = 42.3 bits (95), Expect = 6e-05 Identities = 21/48 (43%), Positives = 29/48 (60%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 RK R+ RT FT QL+ LE+ F E Y D R ++A + L EA+V+ Sbjct: 166 RKCRKSRTVFTDLQLRVLEKTFSEQKYLDSTNRAKLAQILGLNEAQVK 213 >SB_36278| Best HMM Match : Homeobox (HMM E-Value=4.8e-30) Length = 166 Score = 42.3 bits (95), Expect = 6e-05 Identities = 20/48 (41%), Positives = 28/48 (58%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K RR RT FT QL LE F+ T Y + R +A+ + LTE +V++ Sbjct: 47 KPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLGLTETQVKI 94 >SB_11047| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) Length = 193 Score = 42.3 bits (95), Expect = 6e-05 Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 H ++ RR T F+ Q LE AFQ +P I RE++ ++D+ E+R+QV Sbjct: 19 HSVPSNPRKSHRRQNTFFSKEQTVILEGAFQYERFPGIQIREKLVRELDIDESRIQV 75 >SB_15284| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) Length = 159 Score = 42.3 bits (95), Expect = 6e-05 Identities = 20/57 (35%), Positives = 31/57 (54%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 H ++ RR T F+ Q LE AFQ +P I RE++ ++D+ E+R+QV Sbjct: 19 HSVPSNPRKSHRRQNTFFSKEQTVILEGAFQYERFPGIQIREKLVRELDIDESRIQV 75 >SB_49275| Best HMM Match : Homeobox (HMM E-Value=2.8e-27) Length = 116 Score = 41.9 bits (94), Expect = 8e-05 Identities = 20/56 (35%), Positives = 33/56 (58%) Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +G +K+ +R RT F QL+ LE+AF+ Y R ++A ++LTE +V+V Sbjct: 41 QGIRCQKKTSKRCRTIFAPYQLQRLEKAFERQQYVAGEERRQLATGLNLTETQVKV 96 >SB_8061| Best HMM Match : Homeobox (HMM E-Value=5.1e-27) Length = 418 Score = 41.9 bits (94), Expect = 8e-05 Identities = 21/51 (41%), Positives = 31/51 (60%) Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 E K+R+ R FT AQ ELER F++ Y RE++A I+LT +V++ Sbjct: 88 EPPKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREQLARIINLTPTQVKI 138 >SB_5629| Best HMM Match : PAX (HMM E-Value=0) Length = 383 Score = 41.9 bits (94), Expect = 8e-05 Identities = 21/46 (45%), Positives = 28/46 (60%) Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RR RT FTS QL L+ F YP + R+E+A + + E+RVQV Sbjct: 278 RRTRTRFTSQQLHVLQSEFTRNPYPTLEERKELARYLCVCESRVQV 323 >SB_45591| Best HMM Match : Homeobox (HMM E-Value=7.3e-18) Length = 293 Score = 41.9 bits (94), Expect = 8e-05 Identities = 24/75 (32%), Positives = 35/75 (46%) Query: 16 HRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 75 H Y TGL K + + S +++ +R R T Q K LE A+ YP I R+ Sbjct: 140 HNCYGWRGTGLSVKNDEATQQSTSDRADIKRKRRNLTKRQQKILETAYSTIKYPTIEDRQ 199 Query: 76 EIAMKIDLTEARVQV 90 + L+E R+QV Sbjct: 200 RLETSTQLSEDRIQV 214 >SB_57648| Best HMM Match : Homeobox (HMM E-Value=5.3e-30) Length = 205 Score = 41.5 bits (93), Expect = 1e-04 Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 R+ R+ RT FT QL+ LE+ F E Y D +R ++A + L E +V+ Sbjct: 118 RRCRKSRTVFTDLQLRVLEKTFSEQKYLDTSSRSKLAQTLGLNETQVK 165 >SB_22129| Best HMM Match : Homeobox (HMM E-Value=4.6e-26) Length = 366 Score = 41.1 bits (92), Expect = 1e-04 Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RK++R R FT +Q+ ELER F++ Y RE++A IDLT +V++ Sbjct: 223 RKKKR-RILFTKSQIFELERRFRQQKYLSANEREQLARIIDLTPTQVKI 270 >SB_53176| Best HMM Match : Homeobox (HMM E-Value=0) Length = 373 Score = 41.1 bits (92), Expect = 1e-04 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 5/67 (7%) Query: 24 TGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDL 83 T P+ GS E + T RR RT FT QLK LE+ F +Y R E+A ++L Sbjct: 204 TAFPWAGAGSSEATRT-----RRYRTAFTREQLKRLEKEFMRENYVSRTRRCELANALNL 258 Query: 84 TEARVQV 90 +E +++ Sbjct: 259 SETTIKI 265 Score = 40.3 bits (90), Expect = 2e-04 Identities = 19/52 (36%), Positives = 30/52 (57%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +E + RR RT FT QLK LE+ F +Y R E+A ++L+E +++ Sbjct: 59 SEATRTRRYRTAFTREQLKRLEKEFMRENYVSRTRRCELANALNLSETTIKI 110 >SB_31530| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 661 Score = 41.1 bits (92), Expect = 1e-04 Identities = 20/59 (33%), Positives = 34/59 (57%) Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 G + ++ RR RTT+ Q++ELE AF YP ++ +A+++ L ++RVQV Sbjct: 403 GGKDDVFFAEKSGRRNRTTYKRWQIEELESAFSINPYPTSLHKKALAVRLGLRDSRVQV 461 Score = 27.5 bits (58), Expect = 1.8 Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 57 KELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++LE AF YP + +A+++ L ++RVQV Sbjct: 467 RKLESAFAINPYPTCLYEKALAVRLGLRDSRVQV 500 Score = 27.5 bits (58), Expect = 1.8 Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 57 KELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++LE AF YP + +A+++ L ++RVQV Sbjct: 506 RKLESAFAINPYPTCLYEKALAVRLGLRDSRVQV 539 Score = 27.5 bits (58), Expect = 1.8 Identities = 12/34 (35%), Positives = 21/34 (61%) Query: 57 KELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++LE AF YP + +A+++ L ++RVQV Sbjct: 545 RKLESAFAINPYPTCLYEKALAVRLGLRDSRVQV 578 >SB_11435| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 618 Score = 41.1 bits (92), Expect = 1e-04 Identities = 19/48 (39%), Positives = 29/48 (60%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 R+ R+ RT FT QL+ LE+ F E Y D +R ++A + L E +V+ Sbjct: 508 RRCRKSRTVFTDLQLRVLEKTFSEQKYLDTSSRAKLAQTLGLNETQVK 555 >SB_22870| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 225 Score = 40.7 bits (91), Expect = 2e-04 Identities = 21/51 (41%), Positives = 31/51 (60%) Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++ K RR RTTFTS Q +LE F + Y R E+A ++LTE +V++ Sbjct: 112 KENKPRRQRTTFTSEQTLKLELEFHQNEYITRSRRFELAACLNLTETQVKI 162 >SB_26105| Best HMM Match : Homeobox (HMM E-Value=1.1e-30) Length = 315 Score = 40.3 bits (90), Expect = 2e-04 Identities = 20/48 (41%), Positives = 29/48 (60%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K +RIRT FT QL+ LE+ F+ Y R +A ++LTE +V+V Sbjct: 247 KPKRIRTIFTPEQLERLEKEFERQQYMVGAERHYLAASLNLTETQVKV 294 >SB_50832| Best HMM Match : Homeobox (HMM E-Value=8.7e-23) Length = 285 Score = 39.9 bits (89), Expect = 3e-04 Identities = 20/50 (40%), Positives = 28/50 (56%) Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 E R+ RRIRT FT QL++LE F+ Y R E A + LT +++ Sbjct: 200 ESRRFRRIRTVFTRDQLQKLEDRFKHDKYLSTQDRNEFARSLQLTPLQLK 249 >SB_36166| Best HMM Match : Homeobox (HMM E-Value=2.6e-28) Length = 209 Score = 39.9 bits (89), Expect = 3e-04 Identities = 20/48 (41%), Positives = 30/48 (62%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88 +RK+R+ RT FT+ Q+ ELER F Y R++IAM + L A++ Sbjct: 120 QRKRRKPRTCFTNRQIIELERRFMYQKYLSPSDRDDIAMALGLPGAQI 167 >SB_8063| Best HMM Match : Homeobox (HMM E-Value=8.5e-24) Length = 963 Score = 39.9 bits (89), Expect = 3e-04 Identities = 22/53 (41%), Positives = 31/53 (58%) Query: 38 LTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 L+E K+R+ R FT AQ LER F + Y REE+A +LT A+V++ Sbjct: 85 LSEPPKKRKRRILFTKAQTFILERRFTQQRYLSAPEREELARIANLTPAQVKI 137 >SB_45690| Best HMM Match : Homeobox (HMM E-Value=4.6e-31) Length = 255 Score = 39.5 bits (88), Expect = 4e-04 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Query: 7 EAGEINCKIHRIYSESQTGLPYKVY-GSHEGSL--TEKRKQRRIRTTFTSAQLKELERAF 63 E G+ NC H+ Y+ ++ P + S G+ + + + +R RT +T QL ELE+ F Sbjct: 97 EPGQ-NCSFHQ-YAWLKSTAPDNWWPNSTTGNSGWSNRAEGKRKRTAYTRKQLLELEKEF 154 Query: 64 QETHYPDIYTREEIAMKIDLTEARVQV 90 H+ R E+A +++LTE +V++ Sbjct: 155 HFNHFLTKERRSEMASQLNLTERQVKI 181 >SB_16156| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 255 Score = 39.5 bits (88), Expect = 4e-04 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Query: 7 EAGEINCKIHRIYSESQTGLPYKVY-GSHEGSL--TEKRKQRRIRTTFTSAQLKELERAF 63 E G+ NC H+ Y+ ++ P + S G+ + + + +R RT +T QL ELE+ F Sbjct: 97 EPGQ-NCSFHQ-YAWLKSTAPDNWWPNSTTGNSGWSNRAEGKRKRTAYTRKQLLELEKEF 154 Query: 64 QETHYPDIYTREEIAMKIDLTEARVQV 90 H+ R E+A +++LTE +V++ Sbjct: 155 HFNHFLTKERRSEMASQLNLTERQVKI 181 >SB_34953| Best HMM Match : Homeobox (HMM E-Value=1e-25) Length = 200 Score = 38.7 bits (86), Expect = 7e-04 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 4/75 (5%) Query: 19 YSESQTGLPYKVYGSHEGSLTEKR----KQRRIRTTFTSAQLKELERAFQETHYPDIYTR 74 Y+E+ + S ++KR K+RR RT FTS QLK LE F+ + Y I R Sbjct: 67 YTENTSNTKSSPITKSSSSSSDKRDKLAKKRRKRTAFTSFQLKCLEDKFKFSKYLTIAER 126 Query: 75 EEIAMKIDLTEARVQ 89 + +A + LT +++ Sbjct: 127 DMMARSLQLTNRQIK 141 >SB_10406| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 268 Score = 38.7 bits (86), Expect = 7e-04 Identities = 19/49 (38%), Positives = 30/49 (61%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 R+ +R RT++T+ QL ELE+ F Y R EI+ + LTE +V++ Sbjct: 168 RESKRHRTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKI 216 >SB_10405| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 368 Score = 38.3 bits (85), Expect = 0.001 Identities = 19/49 (38%), Positives = 29/49 (59%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 R +R RT++T+ QL ELE+ F Y R EI+ + LTE +V++ Sbjct: 78 RSSKRHRTSYTNKQLLELEKEFHFNKYLCSSRRREISKALQLTERQVKI 126 >SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 275 Score = 38.3 bits (85), Expect = 0.001 Identities = 19/46 (41%), Positives = 29/46 (63%) Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RR+RT FT QL LE +F + HY R+++A + L+E +V+V Sbjct: 133 RRVRTAFTPFQLLCLETSFDKNHYVVGTERKQLASYLKLSETQVKV 178 >SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32) Length = 257 Score = 37.9 bits (84), Expect = 0.001 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 12 NCKIHRIYSES--QTGLPYKVYGSHEGSLTEKR-----KQRRIRTTFTSAQLKELERAFQ 64 +C H +Y Q G + G + L+ + + RR RT F+S QL LER FQ Sbjct: 67 HCDEHHVYPSPWIQCGQHFMPPGCSQHYLSARNMIVSGRHRRPRTAFSSHQLLALERQFQ 126 Query: 65 ETHYPDIYTREEIAMKIDLTEARVQV 90 Y R E+A + LTE +V++ Sbjct: 127 LHKYLTRPQRYELATSLMLTETQVKI 152 >SB_3037| Best HMM Match : Homeobox (HMM E-Value=4.3e-27) Length = 308 Score = 37.5 bits (83), Expect = 0.002 Identities = 17/49 (34%), Positives = 32/49 (65%) Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +K R+ RT ++S QL+EL + F +T Y + R ++A + LT+ +V++ Sbjct: 172 KKIRKPRTIYSSFQLRELNKRFIKTQYLALPERADLAAYLGLTQTQVKI 220 >SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 401 Score = 37.5 bits (83), Expect = 0.002 Identities = 16/52 (30%), Positives = 32/52 (61%) Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 ++KR++++ RT F+ +Q+ +LE F Y R +A ++ LTE +V++ Sbjct: 208 SKKRRKKKTRTVFSRSQVYQLESTFDMKRYLSSSERAGLASQLHLTETQVKI 259 >SB_47662| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 559 Score = 37.5 bits (83), Expect = 0.002 Identities = 17/46 (36%), Positives = 28/46 (60%) Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 +++ RT FT +Q+ ELE+ FQ Y R E+A + LT+ +V+ Sbjct: 402 KKKPRTAFTESQISELEKRFQSQKYLGSKERSELAGTLGLTDTQVK 447 >SB_8774| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 223 Score = 37.1 bits (82), Expect = 0.002 Identities = 19/47 (40%), Positives = 27/47 (57%) Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + R R +T QL ELE+ F T Y R E+A +DLTE +V++ Sbjct: 148 KHRKRMAYTRIQLLELEKEFHFTRYLTKERRTEMARMLDLTERQVKI 194 >SB_45417| Best HMM Match : Homeobox (HMM E-Value=5.1e-09) Length = 216 Score = 36.7 bits (81), Expect = 0.003 Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 1/40 (2%) Query: 51 FTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 FTS +L E AFQ +P I RE++A ++D+ E+R+QV Sbjct: 60 FTSPRLAT-EGAFQYERFPGIQIREKLARELDIDESRIQV 98 >SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) Length = 511 Score = 36.7 bits (81), Expect = 0.003 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Query: 21 ESQTGLPYKVYGSHEGSLTEKR--KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIA 78 ES T L Y + G LT + +R+RT+F QL+ ++ F H PD ++++ Sbjct: 396 ESITNLGYDL-SDRPGELTTGADGRPKRVRTSFKHHQLRAMKTYFAMNHNPDAKDLKQLS 454 Query: 79 MKIDLTEARVQV 90 K LT+ +QV Sbjct: 455 QKTGLTKRVLQV 466 >SB_10407| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 231 Score = 36.3 bits (80), Expect = 0.004 Identities = 19/46 (41%), Positives = 28/46 (60%) Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +R RT++T+ QL ELE+ F Y R E+A + LTE +V+V Sbjct: 100 KRYRTSYTNRQLLELEKEFHYNKYLCGTRRRELANAMKLTERQVKV 145 >SB_8775| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 464 Score = 35.9 bits (79), Expect = 0.005 Identities = 17/42 (40%), Positives = 25/42 (59%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 R+ FT+ Q E+E+ F HY R EI M +DL+E +V+ Sbjct: 47 RSAFTTVQQLEIEKEFLYDHYVSRVRRIEIVMALDLSEKQVR 88 >SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) Length = 824 Score = 35.5 bits (78), Expect = 0.007 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 HE +K+K+R R+ F+ QL+ L+ F HY R +A +D+TE +V+ Sbjct: 484 HEQGTPDKKKKRH-RSHFSQLQLQYLDAIFARQHYLSRDERTVLAGALDMTELQVR 538 >SB_15| Best HMM Match : Homeobox (HMM E-Value=4.1e-30) Length = 287 Score = 35.5 bits (78), Expect = 0.007 Identities = 19/48 (39%), Positives = 27/48 (56%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K +R+RT F+ QL LER F Y R +A ++ LTE +V+V Sbjct: 210 KPKRVRTIFSPDQLDRLEREFDNQQYIVGTERFYLATELGLTETQVKV 257 >SB_58034| Best HMM Match : VWA (HMM E-Value=0) Length = 1203 Score = 35.5 bits (78), Expect = 0.007 Identities = 15/47 (31%), Positives = 28/47 (59%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 K+ ++R F+ QL LE+ F+E Y R E++ +++TE +V+ Sbjct: 1015 KRPKLRPLFSKTQLSRLEKEFEEKRYLTETKRAELSKDLEMTETQVK 1061 Score = 31.5 bits (68), Expect = 0.11 Identities = 14/47 (29%), Positives = 25/47 (53%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 K ++R F+ QL LE+ F Y RE+++ + +TE +V+ Sbjct: 1114 KPTKLRPLFSKTQLSRLEKEFSGNKYLTESKREQLSKDLGMTETQVK 1160 >SB_41100| Best HMM Match : Homeobox (HMM E-Value=1.5e-24) Length = 103 Score = 35.5 bits (78), Expect = 0.007 Identities = 16/45 (35%), Positives = 28/45 (62%) Query: 46 RIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 R RT +T++Q ELE+ F + Y R+E+A +DL+E +++ Sbjct: 20 RARTAYTASQQLELEKEFLYSRYITRTRRKELANTLDLSEKHIKI 64 >SB_14196| Best HMM Match : FG-GAP (HMM E-Value=0) Length = 693 Score = 35.5 bits (78), Expect = 0.007 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 HE +K+K+R R+ F+ QL+ L+ F HY R +A +D+TE +V+ Sbjct: 17 HEQGTPDKKKKRH-RSHFSQLQLQYLDAIFARQHYLSRDERTVLAGALDMTELQVR 71 >SB_11160| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 236 Score = 35.5 bits (78), Expect = 0.007 Identities = 17/54 (31%), Positives = 31/54 (57%) Query: 37 SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 S + K++ R TF+ Q+ LE+ F++T Y R +A + +TE++V+V Sbjct: 128 STEDDSKRKHTRPTFSGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV 181 >SB_25357| Best HMM Match : Homeobox (HMM E-Value=8.3e-28) Length = 317 Score = 34.7 bits (76), Expect = 0.012 Identities = 17/50 (34%), Positives = 28/50 (56%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K +++R R F+ Q+ ELER F Y R ++A + LTE +V++ Sbjct: 127 KPRRKRSRAAFSHQQVFELERRFSHQKYLSGPERADLAAALKLTETQVKI 176 >SB_30811| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) Length = 133 Score = 34.3 bits (75), Expect = 0.016 Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 R TFT QL ELE+ F + Y R EIA + LTE ++++ Sbjct: 26 RFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKI 68 >SB_53178| Best HMM Match : Homeobox (HMM E-Value=2.5e-26) Length = 428 Score = 34.3 bits (75), Expect = 0.016 Identities = 18/43 (41%), Positives = 25/43 (58%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 R TFT QL ELE+ F + Y R EIA + LTE ++++ Sbjct: 253 RFTFTQRQLVELEKEFHFSKYLTRTRRIEIATTLKLTEMQIKI 295 >SB_21878| Best HMM Match : Homeobox (HMM E-Value=1.5e-25) Length = 99 Score = 33.9 bits (74), Expect = 0.021 Identities = 17/50 (34%), Positives = 29/50 (58%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 +R++ R FT Q + LE+ FQ Y I+ R ++A + L+E +V+V Sbjct: 4 QRRRPWSRPVFTQLQRRGLEKRFQVQKYITIHDRYQLAAMLGLSETQVKV 53 >SB_52868| Best HMM Match : Homeobox (HMM E-Value=1.6e-23) Length = 434 Score = 33.9 bits (74), Expect = 0.021 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%) Query: 27 PYKVYGSHEGSLTEKRK-QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTE 85 P K+ S + K K R R F+++QL LE F +THY +++ + +TE Sbjct: 346 PPKIPRSKPRRGSRKHKLDRNPRIPFSASQLAALEAKFLDTHYLSSVEVRDLSSSLSVTE 405 Query: 86 ARVQV 90 RV++ Sbjct: 406 HRVKI 410 >SB_32587| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 207 Score = 33.9 bits (74), Expect = 0.021 Identities = 17/43 (39%), Positives = 26/43 (60%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RT +++ QL ELE+ F Y R EIA ++LTE +V++ Sbjct: 72 RTIYSTRQLVELEKEFHYNRYLCRPRRIEIAQSLELTEKQVKI 114 >SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) Length = 328 Score = 33.9 bits (74), Expect = 0.021 Identities = 19/50 (38%), Positives = 26/50 (52%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + K +R+RTTFT QL+ L+ F PD E IA L++ QV Sbjct: 251 RHKAKRVRTTFTEDQLQILQANFNIDSNPDGQDLERIAQLTGLSKRVTQV 300 >SB_29536| Best HMM Match : Homeobox (HMM E-Value=2.6e-30) Length = 179 Score = 33.1 bits (72), Expect = 0.036 Identities = 18/48 (37%), Positives = 29/48 (60%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + +R RT+FT AQL LE F+ Y R ++A ++L+E +V+V Sbjct: 109 RPKRSRTSFTPAQLDRLEDEFRVDMYVVGLKRMKLANDLNLSERQVKV 156 >SB_37814| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 333 Score = 31.9 bits (69), Expect = 0.083 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%) Query: 30 VYGSHEGSLTEKRKQRRI--RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87 V G H T KR R+ R F+ Q++ LE+ F+E Y R E++ + +TE + Sbjct: 185 VAGFHPFLHTRKRFMRKPKQRPLFSHNQIQRLEKEFKEEKYLTESKRAELSKDLGMTETQ 244 Query: 88 VQ 89 V+ Sbjct: 245 VK 246 >SB_25008| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 237 Score = 31.9 bits (69), Expect = 0.083 Identities = 17/50 (34%), Positives = 25/50 (50%) Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 + R R RT FT QLK LE + Y R +A +++TE +V+ Sbjct: 149 KNRANPRTRTHFTERQLKYLETYYSNGRYLSRDERTVLAQALEMTELQVR 198 >SB_3427| Best HMM Match : Homeobox (HMM E-Value=4e-24) Length = 245 Score = 31.9 bits (69), Expect = 0.083 Identities = 14/43 (32%), Positives = 26/43 (60%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 R+ F++ Q+ +LER F Y R EIA +++T+ +V++ Sbjct: 83 RSFFSADQVSQLERVFAARQYVSAKERAEIAETLNMTDDQVKI 125 >SB_53611| Best HMM Match : Homeobox (HMM E-Value=1.2e-25) Length = 389 Score = 31.5 bits (68), Expect = 0.11 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%) Query: 42 RKQRR--IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 RK RR R F++ Q K LE+ FQ Y R ++A + LT+ +V+V Sbjct: 310 RKPRRPWTRAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLTDNQVKV 360 >SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 154 Score = 30.7 bits (66), Expect = 0.19 Identities = 13/17 (76%), Positives = 16/17 (94%) Query: 74 REEIAMKIDLTEARVQV 90 RE +AM++DLTEARVQV Sbjct: 2 REALAMRLDLTEARVQV 18 >SB_40884| Best HMM Match : Homeobox (HMM E-Value=0.068) Length = 229 Score = 30.7 bits (66), Expect = 0.19 Identities = 13/39 (33%), Positives = 24/39 (61%) Query: 51 FTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 FT+ QL +LE F +PD+ T + IA++ +L+ ++ Sbjct: 105 FTTYQLNKLEGIFSRQKWPDVVTLDVIALESNLSAEDIE 143 >SB_4113| Best HMM Match : Homeobox (HMM E-Value=1.7e-05) Length = 224 Score = 30.3 bits (65), Expect = 0.25 Identities = 12/45 (26%), Positives = 25/45 (55%) Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 +R+R+ + Q+ +L+ AF E +P R ++A +I R++ Sbjct: 53 KRMRSKLSKRQVNKLDAAFMENDFPTTIARHKLAAEIKAPVKRIK 97 >SB_19758| Best HMM Match : Homeobox (HMM E-Value=1.6e-20) Length = 228 Score = 30.3 bits (65), Expect = 0.25 Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 K+++ R F Q++ LE F Y R +A +IDLT+A+V+ Sbjct: 119 KKQKQRPLFGQKQIQRLEEEFVCEKYISKSRRSALAAEIDLTDAQVR 165 >SB_3426| Best HMM Match : Homeobox (HMM E-Value=3.4e-22) Length = 245 Score = 30.3 bits (65), Expect = 0.25 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 EK + R R+ F++ Q+ +LER F Y R EIA ++T+ +V+ Sbjct: 76 EKSTKPR-RSFFSADQVNQLERVFTAQQYVSAKERAEIAETFNMTDDQVK 124 >SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) Length = 434 Score = 30.3 bits (65), Expect = 0.25 Identities = 17/48 (35%), Positives = 25/48 (52%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K+R RTT + QL+ L+ F T P RE++A + L +QV Sbjct: 152 KRRGPRTTIKAKQLEALKSTFAATPKPSRNIREKLAQETGLNMRVIQV 199 >SB_55443| Best HMM Match : Homeobox (HMM E-Value=2.3e-26) Length = 245 Score = 29.9 bits (64), Expect = 0.34 Identities = 13/43 (30%), Positives = 26/43 (60%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 R+ F++ Q+ +LER F Y R EIA +++++ +V++ Sbjct: 83 RSFFSADQVNQLERVFAAHQYVSANERAEIAETLNMSDDQVKI 125 >SB_10703| Best HMM Match : Homeobox (HMM E-Value=4.6e-08) Length = 531 Score = 29.5 bits (63), Expect = 0.44 Identities = 16/43 (37%), Positives = 26/43 (60%) Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87 RR RT F++ QL+ LER F + Y R+ +A ++ L+E + Sbjct: 468 RRGRTVFSAQQLQVLERVFAGSQYIVGSQRKFLASQLRLSETQ 510 >SB_18736| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1452 Score = 29.1 bits (62), Expect = 0.59 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 17/93 (18%) Query: 15 IHRIYSESQTGLPYKVYG----SHEGSLTEKRKQRRIRTTFTSAQLKELERAFQE----- 65 +H +Y E YK G SH +L + KQ+ FTS + + + F E Sbjct: 645 VHNVYGEEPPQRVYKCGGHVGRSHGNNLKDFAKQK----AFTSGHISKWKELFPEMENLK 700 Query: 66 ---THYPDIYTREEIAMKIDLTEARVQVAKELR 95 + +P Y + A K + EAR+Q K+L+ Sbjct: 701 HLISAHPKKYPKSSDAFKSAMREARIQ-GKQLK 732 >SB_14693| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 245 Score = 28.7 bits (61), Expect = 0.77 Identities = 13/42 (30%), Positives = 25/42 (59%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 R+ F++ Q+ +LER F Y R EIA +++++ +V+ Sbjct: 83 RSFFSADQVNQLERVFAAHQYVSANERAEIAETLNMSDDQVK 124 >SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) Length = 242 Score = 28.7 bits (61), Expect = 0.77 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Query: 52 TSAQLKELERAFQETHYPDIYTRE---EIAMKIDLTEARVQVAK 92 T +KE E +F+E P + T E E +++TEA ++ AK Sbjct: 105 TEEPVKEAEGSFEEAEAPVVETEEPVKEAKASVEITEAPIEEAK 148 >SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 401 Score = 28.7 bits (61), Expect = 0.77 Identities = 20/79 (25%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 5 FVEAGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQ 64 ++E E+ +I ++ E+ L + S+ S E ++IR FT Q + L F+ Sbjct: 305 WLELPEVK-RIPQLRMEAAKELDSRAKRSNSESDVEAAPSKKIRRQFTETQKRTLFAIFK 363 Query: 65 ETHYPDIYTREEIAMKIDL 83 ET P ++ +A ++ L Sbjct: 364 ETKKPTKDMQKAVAEELGL 382 >SB_52899| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 62 Score = 27.9 bits (59), Expect = 1.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 23 QTGLPYKVYGSHEGSLTEKRKQ 44 +TGLP Y SH L E+RKQ Sbjct: 10 ETGLPLGGYDSHRKKLNEERKQ 31 >SB_15916| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 62 Score = 27.9 bits (59), Expect = 1.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 23 QTGLPYKVYGSHEGSLTEKRKQ 44 +TGLP Y SH L E+RKQ Sbjct: 10 ETGLPLGGYDSHRKKLNEERKQ 31 >SB_4833| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 123 Score = 27.9 bits (59), Expect = 1.4 Identities = 12/22 (54%), Positives = 14/22 (63%) Query: 23 QTGLPYKVYGSHEGSLTEKRKQ 44 +TGLP Y SH L E+RKQ Sbjct: 10 ETGLPLGGYDSHRKKLNEERKQ 31 >SB_42661| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1717 Score = 27.5 bits (58), Expect = 1.8 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKID 82 RT ++EL+ A HY ++YTRE ++ +D Sbjct: 1138 RTDRLCVDIRELD-ATPSAHYTEVYTRENASVMLD 1171 >SB_18528| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) Length = 390 Score = 27.5 bits (58), Expect = 1.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 + K R R F + +LE+ F E Y R +A ++++TE +V+ Sbjct: 76 QSSKARNKRPVFHPDVVAQLEQVFDERRYISADQRFALAKELNMTEEQVK 125 >SB_11862| Best HMM Match : Homeobox (HMM E-Value=1.1e-16) Length = 99 Score = 27.5 bits (58), Expect = 1.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Query: 56 LKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 L+ LE+ F E Y D R ++A + L EA+V+ Sbjct: 1 LRVLEKTFSEQKYLDSTNRAKLAQILGLNEAQVK 34 >SB_32283| Best HMM Match : Homeobox (HMM E-Value=4.5e-20) Length = 398 Score = 27.1 bits (57), Expect = 2.4 Identities = 12/42 (28%), Positives = 25/42 (59%) Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 R+ FT Q+ L+R F Y R+++A ++++T+ +V+ Sbjct: 244 RSFFTEHQVACLQRVFANRRYVCSSERQKLAKELNMTDQQVK 285 >SB_28259| Best HMM Match : Filament (HMM E-Value=0.2) Length = 349 Score = 27.1 bits (57), Expect = 2.4 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%) Query: 34 HEGSLTEKRKQR-RIRTTFT--SAQLKELERAFQETHYPDIYTREE 76 H +T R R R + F Q KELER+++E+ + TREE Sbjct: 113 HNSEVTTLRLDRDRFKAKFEMMQKQQKELERSYEESCNEKLKTREE 158 >SB_56769| Best HMM Match : UIM (HMM E-Value=0.0025) Length = 358 Score = 27.1 bits (57), Expect = 2.4 Identities = 14/40 (35%), Positives = 20/40 (50%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKID 82 + RR R Q K++ERAF E Y D+ I + +D Sbjct: 219 RNRRRRKKNKVKQSKKVERAFSEDAYMDVDMLRAIQLSLD 258 >SB_47470| Best HMM Match : Pou (HMM E-Value=1.3e-22) Length = 441 Score = 27.1 bits (57), Expect = 2.4 Identities = 15/48 (31%), Positives = 26/48 (54%) Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 K+R+ RT+F++ L+ L F++ P +IA K+ L V+V Sbjct: 233 KKRKRRTSFSNEALRLLISHFEQNPKPSSSEIAQIASKLGLEPVTVRV 280 >SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) Length = 2155 Score = 26.6 bits (56), Expect = 3.1 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%) Query: 25 GLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEI-AMKIDL 83 GL ++ E L+ K+K + + LER Q++H + + EE+ A+KI L Sbjct: 575 GLELQLIQLQEELLSLKQKNTDLDNQAKTEAEPVLERQLQQSHQKEDHMVEELNALKIQL 634 Query: 84 TEARVQV 90 A ++ Sbjct: 635 NSANTEL 641 >SB_31379| Best HMM Match : Pou (HMM E-Value=0) Length = 310 Score = 26.6 bits (56), Expect = 3.1 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 28 YKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87 YK + L K+R+ RT+ +A+ + LE F P IA K+DL++ Sbjct: 232 YKTKQCNSAFLPNSDKKRK-RTSIGAAEKRSLEAYFAMNPRPSSDKIASIAEKLDLSKNV 290 Query: 88 VQV 90 V+V Sbjct: 291 VRV 293 >SB_34025| Best HMM Match : Homeobox (HMM E-Value=1.1e-35) Length = 460 Score = 26.2 bits (55), Expect = 4.1 Identities = 13/49 (26%), Positives = 26/49 (53%) Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89 + Q R R F + LE+ F + Y + + E+A +I++TE +++ Sbjct: 317 RNSQPRKRPVFHPDVVARLEQFFAKRRYINAEQQYELAKEINMTEEQIK 365 >SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0) Length = 1252 Score = 25.8 bits (54), Expect = 5.5 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 3/78 (3%) Query: 7 EAGEINCKIHRIYSESQTGLPYKVYGSHEGSLT-EKRKQRRIRTTFTSAQLKELERAFQE 65 EAG++ C HR + + L K+ LT R+ T T + + R FQ Sbjct: 1057 EAGKLKC--HRYWPSDGSRLYDKILVELTEELTYSDYVLRQFSLTHTEEKSSRIVRQFQC 1114 Query: 66 THYPDIYTREEIAMKIDL 83 T +PD E IDL Sbjct: 1115 TDWPDSGLPESGVGLIDL 1132 >SB_37025| Best HMM Match : Homeobox (HMM E-Value=1.3e-16) Length = 154 Score = 25.8 bits (54), Expect = 5.5 Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 56 LKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90 + +LER F Y R EIA +++T+ +V++ Sbjct: 1 VNQLERVFAAQQYVSAKERAEIAETLNMTDDQVKI 35 >SB_10085| Best HMM Match : Sod_Fe_N (HMM E-Value=1.4) Length = 371 Score = 25.8 bits (54), Expect = 5.5 Identities = 15/45 (33%), Positives = 21/45 (46%) Query: 52 TSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVAKELRT 96 T Q++EL R Q P+ +EE+ K+ V ELRT Sbjct: 235 TITQMRELRRMAQAGELPNDLDKEEVLEKVKNYNKMVADDVELRT 279 >SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05) Length = 867 Score = 25.4 bits (53), Expect = 7.2 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 55 QLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVAK 92 ++KELE F+E PD+ T EE + I A ++ K Sbjct: 505 EIKELEN-FEEEELPDVTTLEEEVVNITQQIAELKEQK 541 >SB_36832| Best HMM Match : DTHCT (HMM E-Value=9.3) Length = 225 Score = 25.4 bits (53), Expect = 7.2 Identities = 14/47 (29%), Positives = 24/47 (51%) Query: 18 IYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQ 64 + ++++ G K + E LTEK ++ + SAQL LE + Q Sbjct: 1 VKAQARKGRRGKAVVNEESELTEKVTKKPAKRRGKSAQLSSLENSVQ 47 >SB_2889| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 154 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/32 (34%), Positives = 19/32 (59%) Query: 29 KVYGSHEGSLTEKRKQRRIRTTFTSAQLKELE 60 K S++ +L +RK+ R+ T +A K+LE Sbjct: 17 KANDSYDATLNRQRKRSRLNTVKNNATKKDLE 48 >SB_1137| Best HMM Match : CC (HMM E-Value=2) Length = 410 Score = 25.4 bits (53), Expect = 7.2 Identities = 12/28 (42%), Positives = 17/28 (60%) Query: 18 IYSESQTGLPYKVYGSHEGSLTEKRKQR 45 I S+++ L YK+ +H LTEK QR Sbjct: 345 ISSKNRQNLSYKLKTNHLADLTEKEVQR 372 >SB_37865| Best HMM Match : IL12 (HMM E-Value=6.1) Length = 236 Score = 25.0 bits (52), Expect = 9.5 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHY 68 S+S TG V G L +K I+TT + +KE+E+ Q Y Sbjct: 189 SKSATGTENMVGGLINSVLN--KKPANIKTTLENEAVKEIEKGVQHFFY 235 >SB_37259| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1690 Score = 25.0 bits (52), Expect = 9.5 Identities = 12/43 (27%), Positives = 22/43 (51%) Query: 11 INCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTS 53 IN K+ +Y+ ++GL Y V G + T + + ++ F S Sbjct: 709 INMKLELVYTSERSGLEYMVVGLVKTVATVRVGKSKLTDIFES 751 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.316 0.130 0.356 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,759,943 Number of Sequences: 59808 Number of extensions: 91679 Number of successful extensions: 407 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 127 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 272 Number of HSP's gapped (non-prelim): 142 length of query: 96 length of database: 16,821,457 effective HSP length: 70 effective length of query: 26 effective length of database: 12,634,897 effective search space: 328507322 effective search space used: 328507322 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 52 (25.0 bits)
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