Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001200-TA|BGIBMGA001200-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(96 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein. 98 9e-22
AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans hom... 98 9e-22
Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical pr... 78 8e-16
Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical p... 74 1e-14
Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical p... 74 1e-14
U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeo... 70 2e-13
U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein. 70 2e-13
Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical pr... 69 5e-13
X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein ( Caeno... 69 7e-13
Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical pr... 67 2e-12
Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical pr... 67 2e-12
Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical pr... 67 2e-12
U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-1... 67 2e-12
U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable abnorm... 67 2e-12
U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein. 67 2e-12
U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein. 67 2e-12
Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical pr... 66 4e-12
X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein. 66 4e-12
AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical ... 62 4e-11
AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical ... 62 4e-11
AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain p... 62 4e-11
AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain p... 62 4e-11
AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain p... 62 4e-11
Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical pr... 58 1e-09
Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical pr... 56 3e-09
U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical pr... 56 4e-09
Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical pr... 56 5e-09
Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical pr... 56 5e-09
L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain pro... 56 5e-09
AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical ... 56 5e-09
AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical... 55 9e-09
AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain p... 51 1e-07
AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain p... 51 1e-07
AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans hom... 51 1e-07
Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical pr... 47 2e-06
Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical pr... 47 2e-06
Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical pr... 47 2e-06
U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22 homeopro... 47 2e-06
U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22 homeopro... 47 2e-06
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 46 5e-06
U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeo... 45 7e-06
U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans homeo... 44 2e-05
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 43 3e-05
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 43 3e-05
Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical pr... 42 9e-05
Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical p... 42 9e-05
AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein. 42 9e-05
X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein ( Caeno... 41 1e-04
Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical pr... 40 2e-04
AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family h... 40 2e-04
AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical ... 40 2e-04
Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical pr... 40 3e-04
Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical pr... 40 3e-04
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 40 3e-04
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 40 3e-04
AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans hom... 40 3e-04
Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical pr... 39 5e-04
Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical pr... 39 5e-04
U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeo... 39 5e-04
AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B protein. 39 5e-04
AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein. 39 5e-04
AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protei... 39 5e-04
AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein. 39 5e-04
Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical pr... 39 6e-04
X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein. 39 6e-04
Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical pr... 38 8e-04
X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodom... 38 8e-04
AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative tran... 38 8e-04
AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans hom... 38 8e-04
Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 37 0.002
U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 37 0.002
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 37 0.002
U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative transc... 36 0.004
U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal ... 36 0.004
U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain fami... 36 0.004
U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical pr... 35 0.008
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 35 0.010
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 35 0.010
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 35 0.010
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 34 0.017
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 34 0.017
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 34 0.017
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 34 0.017
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 34 0.017
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 33 0.040
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 33 0.040
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 32 0.070
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 32 0.070
M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein. 31 0.16
X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein. 30 0.21
L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protei... 30 0.21
L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying defe... 30 0.21
L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying defe... 30 0.21
L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying defe... 30 0.21
Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical pr... 30 0.28
AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family II... 30 0.28
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 30 0.28
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 29 0.37
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 29 0.37
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 29 0.37
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 29 0.37
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 29 0.37
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 29 0.65
M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein ( C.ele... 28 1.1
M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein ( C.ele... 28 1.1
L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated p... 28 1.1
L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated p... 28 1.1
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 27 1.5
Z81545-5|CAB04440.1| 389|Caenorhabditis elegans Hypothetical pr... 27 1.5
U00033-14|AAY44014.1| 215|Caenorhabditis elegans Hypothetical p... 27 1.5
U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeo... 27 2.6
U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeo... 27 2.6
U23139-11|AAK31490.1| 328|Caenorhabditis elegans Hypothetical p... 27 2.6
Z75543-5|CAA99872.2| 270|Caenorhabditis elegans Hypothetical pr... 26 3.5
U41017-6|AAC48215.1| 399|Caenorhabditis elegans C.elegans homeo... 26 3.5
Z74029-6|CAM84812.1| 457|Caenorhabditis elegans Hypothetical pr... 26 4.6
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 26 4.6
Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46267-2|CAC42301.1| 600|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46267-1|CAC42302.1| 389|Caenorhabditis elegans Hypothetical pr... 25 6.1
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 25 8.0
U72347-1|AAD12189.1| 101|Caenorhabditis elegans putative transc... 25 8.0
AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical... 25 8.0
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 25 8.0
>AF272397-1|AAF76229.1| 237|Caenorhabditis elegans CEH-17 protein.
Length = 237
Score = 97.9 bits (233), Expect = 9e-22
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
E+RKQRRIRTTFTS QLKELER+F ETHYPDIYTREEIAM+IDLTEARVQV
Sbjct: 145 ERRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQV 195
>AF003151-5|AAK18908.1| 237|Caenorhabditis elegans C.elegans
homeobox protein 17 protein.
Length = 237
Score = 97.9 bits (233), Expect = 9e-22
Identities = 46/51 (90%), Positives = 49/51 (96%)
Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
E+RKQRRIRTTFTS QLKELER+F ETHYPDIYTREEIAM+IDLTEARVQV
Sbjct: 145 ERRKQRRIRTTFTSGQLKELERSFCETHYPDIYTREEIAMRIDLTEARVQV 195
>Z68008-6|CAA92001.1| 362|Caenorhabditis elegans Hypothetical
protein R08B4.2 protein.
Length = 362
Score = 78.2 bits (184), Expect = 8e-16
Identities = 34/50 (68%), Positives = 42/50 (84%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRKQRR RTTF++ QL ELE+ F THYPD++TREE+A ++ LTEARVQV
Sbjct: 114 KRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQV 163
>Z70780-17|CAA94830.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 74.1 bits (174), Expect = 1e-14
Identities = 36/66 (54%), Positives = 45/66 (68%)
Query: 25 GLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLT 84
GL V+GS +T +RR RTTFT QL+EL+ AFQ++HYPDIY REE+A L
Sbjct: 66 GLGGSVFGSSIAGVTNTPARRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLN 125
Query: 85 EARVQV 90
EAR+QV
Sbjct: 126 EARIQV 131
>Z70754-11|CAA94780.3| 264|Caenorhabditis elegans Hypothetical
protein F58E6.10 protein.
Length = 264
Score = 74.1 bits (174), Expect = 1e-14
Identities = 36/66 (54%), Positives = 45/66 (68%)
Query: 25 GLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLT 84
GL V+GS +T +RR RTTFT QL+EL+ AFQ++HYPDIY REE+A L
Sbjct: 66 GLGGSVFGSSIAGVTNTPARRRHRTTFTQEQLQELDAAFQKSHYPDIYVREELARITKLN 125
Query: 85 EARVQV 90
EAR+QV
Sbjct: 126 EARIQV 131
>U50184-2|AAB93323.1| 344|Caenorhabditis elegans C.elegans homeobox
protein 10 protein.
Length = 344
Score = 70.1 bits (164), Expect = 2e-13
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
G KRK+RR RT FT Q+ ELE+AFQ++HYPDIY RE +A K +L E R+QV
Sbjct: 128 GGKASKRKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 182
>U19995-1|AAA93063.1| 344|Caenorhabditis elegans ceh-10 protein.
Length = 344
Score = 70.1 bits (164), Expect = 2e-13
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
G KRK+RR RT FT Q+ ELE+AFQ++HYPDIY RE +A K +L E R+QV
Sbjct: 128 GGKASKRKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 182
>Z81143-3|CAB03519.2| 276|Caenorhabditis elegans Hypothetical
protein ZK265.4 protein.
Length = 276
Score = 68.9 bits (161), Expect = 5e-13
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+KQRR RTTFT+ QL LE AF +THYPD+Y RE +A K+ L E RVQV
Sbjct: 58 KKQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQV 106
>X52812-1|CAB57216.1| 66|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-10 gene, unknown homeobox. ).
Length = 66
Score = 68.5 bits (160), Expect = 7e-13
Identities = 31/50 (62%), Positives = 39/50 (78%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK+RR RT FT Q+ ELE+AFQ++HYPDIY RE +A K +L E R+QV
Sbjct: 4 KRKKRRHRTIFTQYQIDELEKAFQDSHYPDIYAREVLAGKTELQEDRIQV 53
>Z49937-5|CAC42288.1| 296|Caenorhabditis elegans Hypothetical
protein F14F3.1c protein.
Length = 296
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK +R RT+FT Q++ LE+ F+ THYPD++ RE +A KI L EAR+QV
Sbjct: 55 KRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 104
>Z49937-4|CAC42287.1| 269|Caenorhabditis elegans Hypothetical
protein F14F3.1b protein.
Length = 269
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK +R RT+FT Q++ LE+ F+ THYPD++ RE +A KI L EAR+QV
Sbjct: 28 KRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 77
>Z49937-3|CAA90186.2| 455|Caenorhabditis elegans Hypothetical
protein F14F3.1a protein.
Length = 455
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK +R RT+FT Q++ LE+ F+ THYPD++ RE +A KI L EAR+QV
Sbjct: 214 KRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 263
>U31537-2|AAA82992.1| 261|Caenorhabditis elegans male abnormal-18
protein.
Length = 261
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK +R RT+FT Q++ LE+ F+ THYPD++ RE +A KI L EAR+QV
Sbjct: 20 KRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 69
>U31537-1|AAA82991.1| 455|Caenorhabditis elegans variable
abnormal-3 protein.
Length = 455
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK +R RT+FT Q++ LE+ F+ THYPD++ RE +A KI L EAR+QV
Sbjct: 214 KRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 263
>U29184-1|AAC47542.1| 296|Caenorhabditis elegans MAB-18 protein.
Length = 296
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK +R RT+FT Q++ LE+ F+ THYPD++ RE +A KI L EAR+QV
Sbjct: 55 KRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 104
>U29145-1|AAC47541.1| 284|Caenorhabditis elegans MAB-18 protein.
Length = 284
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
KRK +R RT+FT Q++ LE+ F+ THYPD++ RE +A KI L EAR+QV
Sbjct: 43 KRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 92
>Z47072-1|CAA87368.1| 252|Caenorhabditis elegans Hypothetical
protein F26C11.2 protein.
Length = 252
Score = 66.1 bits (154), Expect = 4e-12
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K+RR RT F+ QL+ELE AF+ +HYPD++ RE +AM++DL E+RVQV
Sbjct: 87 KRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQV 134
>X64904-1|CAA46108.1| 184|Caenorhabditis elegans unc-4 protein.
Length = 184
Score = 66.1 bits (154), Expect = 4e-12
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K+RR RT F+ QL+ELE AF+ +HYPD++ RE +AM++DL E+RVQV
Sbjct: 51 KRRRTRTNFSGWQLEELESAFEASHYPDVFMREALAMRLDLLESRVQV 98
>AL132858-4|CAB60479.2| 338|Caenorhabditis elegans Hypothetical
protein Y113G7A.6b protein.
Length = 338
Score = 62.5 bits (145), Expect = 4e-11
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RKQRR RTTFT QL+ LE F +T YPDI+ RE++A KI L E+RVQV
Sbjct: 144 RKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 192
>AL132858-3|CAB60478.2| 391|Caenorhabditis elegans Hypothetical
protein Y113G7A.6a protein.
Length = 391
Score = 62.5 bits (145), Expect = 4e-11
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RKQRR RTTFT QL+ LE F +T YPDI+ RE++A KI L E+RVQV
Sbjct: 197 RKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 245
>AF381629-1|AAL12002.1| 223|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 223
Score = 62.5 bits (145), Expect = 4e-11
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RKQRR RTTFT QL+ LE F +T YPDI+ RE++A KI L E+RVQV
Sbjct: 160 RKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 208
>AF381628-1|AAL12001.1| 372|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 372
Score = 62.5 bits (145), Expect = 4e-11
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RKQRR RTTFT QL+ LE F +T YPDI+ RE++A KI L E+RVQV
Sbjct: 178 RKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 226
>AF381627-1|AAL12000.1| 332|Caenorhabditis elegans homeodomain
protein TTX-1 protein.
Length = 332
Score = 62.5 bits (145), Expect = 4e-11
Identities = 31/49 (63%), Positives = 37/49 (75%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RKQRR RTTFT QL+ LE F +T YPDI+ RE++A KI L E+RVQV
Sbjct: 138 RKQRRERTTFTRNQLEILESYFVKTRYPDIFMREDMAHKIQLPESRVQV 186
>Z81046-4|CAB02825.1| 278|Caenorhabditis elegans Hypothetical
protein C37E2.5 protein.
Length = 278
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RK RR RTT++ QL+ LE F ET YPD++ RE +A +I L E+R+QV
Sbjct: 39 RKNRRERTTYSRQQLEILETLFNETQYPDVFARERVADQIRLQESRIQV 87
>Z81046-3|CAB02821.1| 257|Caenorhabditis elegans Hypothetical
protein C37E2.4 protein.
Length = 257
Score = 56.4 bits (130), Expect = 3e-09
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+R RR RT+F QL +LE+ F+ET YPD++ RE +A I+L + RVQV
Sbjct: 52 RRAGRRERTSFNRGQLDQLEKVFRETQYPDVHRREALAKAINLPDGRVQV 101
>U39648-4|AAK39290.1| 220|Caenorhabditis elegans Hypothetical
protein T13C5.4 protein.
Length = 220
Score = 56.0 bits (129), Expect = 4e-09
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 10 EINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYP 69
+I CKI ++++Q K+ + RK+R R TF + Q+ E+E+ F E YP
Sbjct: 13 DILCKIQ--FNDTQFETTKKITRKRSNNFNPDRKKRN-RITFDANQIDEMEKVFAENQYP 69
Query: 70 DIYTREEIAMKIDLTEARVQV 90
D +RE++A KI L E RVQ+
Sbjct: 70 DTMSREKLANKIQLHEERVQI 90
>Z73422-5|CAE54882.1| 323|Caenorhabditis elegans Hypothetical
protein B0564.10b protein.
Length = 323
Score = 55.6 bits (128), Expect = 5e-09
Identities = 29/49 (59%), Positives = 33/49 (67%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+K RR RT FTS QL ELE F YPD+ REEIA+ I LTE RV+V
Sbjct: 110 QKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>Z73422-4|CAA97770.1| 319|Caenorhabditis elegans Hypothetical
protein B0564.10a protein.
Length = 319
Score = 55.6 bits (128), Expect = 5e-09
Identities = 29/49 (59%), Positives = 33/49 (67%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+K RR RT FTS QL ELE F YPD+ REEIA+ I LTE RV+V
Sbjct: 110 QKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>L37867-1|AAA63155.1| 319|Caenorhabditis elegans homeodomain
protein protein.
Length = 319
Score = 55.6 bits (128), Expect = 5e-09
Identities = 29/49 (59%), Positives = 33/49 (67%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+K RR RT FTS QL ELE F YPD+ REEIA+ I LTE RV+V
Sbjct: 110 QKPRRQRTHFTSHQLTELENWFSRNRYPDMACREEIAVWISLTEPRVRV 158
>AC006835-2|AAF40014.1| 229|Caenorhabditis elegans Hypothetical
protein ZK993.1 protein.
Length = 229
Score = 55.6 bits (128), Expect = 5e-09
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R++RR RT F+ QL LE F THYPD TREE+A++ L E RV+V
Sbjct: 107 RRKRRHRTIFSEEQLNILETTFSTTHYPDATTREELAVQCSLKEERVEV 155
>AF038608-13|AAC25819.1| 253|Caenorhabditis elegans Hypothetical
protein C09G12.1 protein.
Length = 253
Score = 54.8 bits (126), Expect = 9e-09
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+E+R+ RR+RT F+ QL+ LE AF + YPD+ RE + + +L EAR+QV
Sbjct: 86 SEERRVRRLRTAFSENQLELLEEAFLKCQYPDVQQRETLGKQTELAEARIQV 137
>AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 50.8 bits (116), Expect = 1e-07
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RK +RIRT F+++QL +LE+AF+ HY R+++A K+ LTE +V+V
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKV 172
>AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 50.8 bits (116), Expect = 1e-07
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RK +RIRT F+++QL +LE+AF+ HY R+++A K+ LTE +V+V
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKV 172
>AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans
homeobox protein 2 protein.
Length = 209
Score = 50.8 bits (116), Expect = 1e-07
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RK +RIRT F+++QL +LE+AF+ HY R+++A K+ LTE +V+V
Sbjct: 124 RKNKRIRTAFSASQLIQLEKAFEGNHYVVGNERKQLAAKLSLTETQVKV 172
>Z73974-7|CAL90892.1| 283|Caenorhabditis elegans Hypothetical
protein F29F11.5c protein.
Length = 283
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
T KRK+R+ R FT AQ ELER F+ Y RE +AM+I LT +V++
Sbjct: 121 TGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 172
>Z73974-6|CAL90891.1| 215|Caenorhabditis elegans Hypothetical
protein F29F11.5b protein.
Length = 215
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
T KRK+R+ R FT AQ ELER F+ Y RE +AM+I LT +V++
Sbjct: 53 TGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 104
>Z73974-5|CAA98272.1| 346|Caenorhabditis elegans Hypothetical
protein F29F11.5a protein.
Length = 346
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
T KRK+R+ R FT AQ ELER F+ Y RE +AM+I LT +V++
Sbjct: 184 TGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 235
>U10081-1|AAA20841.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
T KRK+R+ R FT AQ ELER F+ Y RE +AM+I LT +V++
Sbjct: 184 TGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 235
>U10080-1|AAA20840.1| 346|Caenorhabditis elegans CEH-22
homeoprotein protein.
Length = 346
Score = 46.8 bits (106), Expect = 2e-06
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
T KRK+R+ R FT AQ ELER F+ Y RE +AM+I LT +V++
Sbjct: 184 TGKRKKRKRRVLFTKAQTYELERRFRSQKYLSAPEREALAMQIRLTPTQVKI 235
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 45.6 bits (103), Expect = 5e-06
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+K K+++ RTTF+ Q+ ELE+ F+ Y R E+A ++D+TE +V++
Sbjct: 66 QKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKI 116
>U64600-4|AAK39201.1| 299|Caenorhabditis elegans C.elegans homeobox
protein 30 protein.
Length = 299
Score = 45.2 bits (102), Expect = 7e-06
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
G GS +K R+ RT FT QL+ELE F++ Y + R ++A ++ LT+ +V+
Sbjct: 145 GDRMGSPGSCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVK 202
>U64600-5|AAK39202.2| 223|Caenorhabditis elegans C.elegans
homeobox protein 31 protein.
Length = 223
Score = 43.6 bits (98), Expect = 2e-05
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVA 91
+K R+ RT FT QL+ELE F++ Y + R E+A ++ LT+ ++ A
Sbjct: 36 KKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQIGAA 85
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 33 SHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+H+ S++ ++R+ R F+ AQ+ ELER F++ Y RE++A I LT +V++
Sbjct: 139 NHQFSMSSMSQRRKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKI 196
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 33 SHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+H+ S++ ++R+ R F+ AQ+ ELER F++ Y RE++A I LT +V++
Sbjct: 139 NHQFSMSSMSQRRKRRVLFSQAQVYELERRFKQAKYLTAPEREQLANSIRLTPTQVKI 196
>Z95623-1|CAB09133.1| 314|Caenorhabditis elegans Hypothetical
protein Y53C12C.1 protein.
Length = 314
Score = 41.5 bits (93), Expect = 9e-05
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 33 SHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
S + S +R R+TFT+ QL+ LE F YP R ++ + +L EAR+QV
Sbjct: 192 SEDDSTLGANARRLSRSTFTNEQLQSLEEVFLRDPYPSPNERADLVKRTNLPEARIQV 249
>Z48621-10|CAA88539.1| 225|Caenorhabditis elegans Hypothetical
protein R07B1.1 protein.
Length = 225
Score = 41.5 bits (93), Expect = 9e-05
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 38 LTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
L + + R+ RT F++ QL LER FQ Y I R E + + LTE +V++
Sbjct: 123 LRKHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKI 175
>AF286218-1|AAF88063.1| 225|Caenorhabditis elegans VAB-15 protein.
Length = 225
Score = 41.5 bits (93), Expect = 9e-05
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 38 LTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
L + + R+ RT F++ QL LER FQ Y I R E + + LTE +V++
Sbjct: 123 LRKHKNNRKPRTPFSTQQLISLERKFQSKQYLSIAERAEFSASLQLTETQVKI 175
>X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-9 gene, unknown homeobox. ).
Length = 60
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+++ RTTF+ Q+ ELE+ F+ Y R E+A ++D+TE +V++
Sbjct: 1 RKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKI 47
>Z77133-5|CAB00867.3| 232|Caenorhabditis elegans Hypothetical
protein K03A11.3 protein.
Length = 232
Score = 40.3 bits (90), Expect = 2e-04
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 20 SESQTGLPYKVYGSHEG----SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 75
S SQ Y+ + H +L ++++R+ R FT Q+ ELE F++ Y RE
Sbjct: 107 SPSQNQRSYQNHRQHSNPDTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATERE 166
Query: 76 EIAMKIDLTEARVQV 90
E+A + LT +V++
Sbjct: 167 ELAQCLGLTATQVKI 181
>AY205144-1|AAO46042.1| 156|Caenorhabditis elegans NK-2 family
homeodomain factorCEH-28 protein.
Length = 156
Score = 40.3 bits (90), Expect = 2e-04
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 20 SESQTGLPYKVYGSHEG----SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTRE 75
S SQ Y+ + H +L ++++R+ R FT Q+ ELE F++ Y RE
Sbjct: 63 SPSQNQRSYQNHRQHSNPDTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATERE 122
Query: 76 EIAMKIDLTEARVQV 90
E+A + LT +V++
Sbjct: 123 ELAQCLGLTATQVKI 137
>AL031620-3|CAA20928.1| 310|Caenorhabditis elegans Hypothetical
protein C18B12.3 protein.
Length = 310
Score = 40.3 bits (90), Expect = 2e-04
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+RR RT FT Q LE +F+E+HYPD ++ +A + + E R+ V
Sbjct: 180 RRRFRTNFTELQSTFLEDSFKESHYPDHKAKKYMADFLKIPEDRITV 226
>Z48783-8|CAA88702.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 35 EGSL-TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
EGS + RR RT+FT+ QL LE AF+ YP RE I+ + L+E ++
Sbjct: 177 EGSSPSNDASSRRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKI 231
>Z48582-6|CAA88468.2| 308|Caenorhabditis elegans Hypothetical
protein F27E5.2 protein.
Length = 308
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 35 EGSL-TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
EGS + RR RT+FT+ QL LE AF+ YP RE I+ + L+E ++
Sbjct: 177 EGSSPSNDASSRRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKI 231
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
GS +++R RT FT QL L+ F+E+ Y R+E+A ++ L E+++++
Sbjct: 79 GSSGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKI 133
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
GS +++R RT FT QL L+ F+E+ Y R+E+A ++ L E+++++
Sbjct: 79 GSSGSSEEEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAHELGLNESQIKI 133
>AF039720-2|AAB96698.1| 180|Caenorhabditis elegans C.elegans
homeobox protein 12 protein.
Length = 180
Score = 39.5 bits (88), Expect = 3e-04
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K RR RT F+S QL +LE+ F + Y R ++A ++ L+E ++++
Sbjct: 109 KMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKI 156
>Z82279-3|CAD62039.1| 106|Caenorhabditis elegans Hypothetical
protein R03C1.3b protein.
Length = 106
Score = 39.1 bits (87), Expect = 5e-04
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 37 SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
SL ++KQ R TFT Q+ +LER F++T Y R ++A +++++E++V+V
Sbjct: 14 SLNMQKKQSR--PTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 65
>Z82279-2|CAB05260.2| 256|Caenorhabditis elegans Hypothetical
protein R03C1.3a protein.
Length = 256
Score = 39.1 bits (87), Expect = 5e-04
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 37 SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
SL ++KQ R TFT Q+ +LER F++T Y R ++A +++++E++V+V
Sbjct: 164 SLNMQKKQSR--PTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 215
>U41017-5|AAC48216.2| 495|Caenorhabditis elegans C.elegans homeobox
protein 21 protein.
Length = 495
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 29 KVYGSHEGSLTEKRKQRR-IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDL 83
++ G E + +++K + IR TFT QLK L+++FQ+ H P R++++ ++L
Sbjct: 375 RITGLDEPTPAKRKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLEL 430
>AY151210-1|AAN72827.1| 106|Caenorhabditis elegans COG-1B
protein.
Length = 106
Score = 39.1 bits (87), Expect = 5e-04
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 37 SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
SL ++KQ R TFT Q+ +LER F++T Y R ++A +++++E++V+V
Sbjct: 14 SLNMQKKQSR--PTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 65
>AY151209-1|AAN72826.1| 256|Caenorhabditis elegans COG-1A protein.
Length = 256
Score = 39.1 bits (87), Expect = 5e-04
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 37 SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
SL ++KQ R TFT Q+ +LER F++T Y R ++A +++++E++V+V
Sbjct: 164 SLNMQKKQSR--PTFTGHQIYQLERKFEQTKYLAGADRAQLAQELNMSESQVKV 215
>AJ427855-1|CAD20808.1| 495|Caenorhabditis elegans CEH-21 protein
protein.
Length = 495
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 29 KVYGSHEGSLTEKRKQRR-IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDL 83
++ G E + +++K + IR TFT QLK L+++FQ+ H P R++++ ++L
Sbjct: 375 RITGLDEPTPAKRKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLEL 430
>AF023470-1|AAB86814.1| 183|Caenorhabditis elegans CEH-21 protein.
Length = 183
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 29 KVYGSHEGSLTEKRKQRR-IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDL 83
++ G E + +++K + IR TFT QLK L+++FQ+ H P R++++ ++L
Sbjct: 63 RITGLDEPTPAKRKKTVKVIRLTFTETQLKSLQKSFQQNHRPTREMRQKLSATLEL 118
>Z73428-3|CAA97809.1| 247|Caenorhabditis elegans Hypothetical
protein M142.4 protein.
Length = 247
Score = 38.7 bits (86), Expect = 6e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+ RR RT F+ Q+ LER F + +Y TR E+A +++L E ++V
Sbjct: 67 QMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKV 114
>X96636-1|CAA65441.1| 263|Caenorhabditis elegans vab-7 protein.
Length = 263
Score = 38.7 bits (86), Expect = 6e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+ RR RT F+ Q+ LER F + +Y TR E+A +++L E ++V
Sbjct: 83 QMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKV 130
>Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical
protein C28A5.4 protein.
Length = 273
Score = 38.3 bits (85), Expect = 8e-04
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+K R+ RT + S+QL+ L++ FQ+T Y + R +A ++ L++ +V++
Sbjct: 100 KKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKI 148
>X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodomain
protein protein.
Length = 202
Score = 38.3 bits (85), Expect = 8e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RT FT+ QL ELE+ F Y + R EIA + L EA+V++
Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKI 160
>AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative
transcription factor protein.
Length = 278
Score = 38.3 bits (85), Expect = 8e-04
Identities = 16/49 (32%), Positives = 33/49 (67%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+K R+ RT + S+QL+ L++ FQ+T Y + R +A ++ L++ +V++
Sbjct: 105 KKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKI 153
>AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans
homeobox protein 13 protein.
Length = 202
Score = 38.3 bits (85), Expect = 8e-04
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
RT FT+ QL ELE+ F Y + R EIA + L EA+V++
Sbjct: 118 RTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKI 160
>Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical
protein C40H5.5 protein.
Length = 409
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+G+ + ++ +R+RT+F QL+ ++ F H PD +++A K +LT+ +QV
Sbjct: 283 DGNGSGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQV 338
>U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative
transcription factor TTX-3 protein.
Length = 409
Score = 37.1 bits (82), Expect = 0.002
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+G+ + ++ +R+RT+F QL+ ++ F H PD +++A K +LT+ +QV
Sbjct: 283 DGNGSGSQRSKRMRTSFKHHQLRAMKTYFALNHNPDAKDLKQLAAKTNLTKRVLQV 338
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/50 (30%), Positives = 30/50 (60%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+ ++++ RT F+ +Q+ +LE F+ Y R +A K+ LTE +V++
Sbjct: 198 QNRKKKTRTVFSRSQVSQLEMMFECKRYLSSQERSNLAQKLHLTETQVKI 247
>U72348-1|AAB17273.1| 355|Caenorhabditis elegans putative
transcription factor LIM-4 protein.
Length = 355
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
G ++K K +R+RTTF QL L+ F PD E+IA L++ QV
Sbjct: 231 GVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQV 285
>U55856-2|AAA98021.1| 197|Caenorhabditis elegans Touch abnormal
protein 1 protein.
Length = 197
Score = 35.9 bits (79), Expect = 0.004
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
+R+ RT F+ QL+ LER F+ Y R E+A ++L+E +V+
Sbjct: 120 RRKARTVFSDQQLQGLERRFESQRYLSTPERIELANALNLSETQVK 165
>U39740-5|AAA80428.2| 355|Caenorhabditis elegans Lim domain family
protein 4 protein.
Length = 355
Score = 35.9 bits (79), Expect = 0.004
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
G ++K K +R+RTTF QL L+ F PD E+IA L++ QV
Sbjct: 231 GVSSQKAKTKRVRTTFAEDQLSVLQTYFNRDSNPDGADLEKIASMTGLSKRVTQV 285
>U41545-3|ABN43093.1| 152|Caenorhabditis elegans Hypothetical
protein C02F12.10 protein.
Length = 152
Score = 35.1 bits (77), Expect = 0.008
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 41 KRKQRRI-RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
KR R RTTFTS Q+ LE F + Y R E+A I+LTE +V+
Sbjct: 37 KRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTECQVK 86
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 34.7 bits (76), Expect = 0.010
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 29 KVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
+V+ + GS EKR+ RT +T Q+ ELE+ F Y R E+A + LTE +V
Sbjct: 154 RVHSTTGGSRGEKRQ----RTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQV 209
Query: 89 QV 90
++
Sbjct: 210 KI 211
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 34.7 bits (76), Expect = 0.010
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 29 KVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
+V+ + GS EKR+ RT +T Q+ ELE+ F Y R E+A + LTE +V
Sbjct: 154 RVHSTTGGSRGEKRQ----RTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQV 209
Query: 89 QV 90
++
Sbjct: 210 KI 211
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 34.7 bits (76), Expect = 0.010
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 29 KVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
+V+ + GS EKR+ RT +T Q+ ELE+ F Y R E+A + LTE +V
Sbjct: 154 RVHSTTGGSRGEKRQ----RTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQV 209
Query: 89 QV 90
++
Sbjct: 210 KI 211
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 33.9 bits (74), Expect = 0.017
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
G + K+R RTT + QL+ L+ AF T P + RE++A + L +QV
Sbjct: 229 GKDNSDDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQV 287
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 33.9 bits (74), Expect = 0.017
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
G + K+R RTT + QL+ L+ AF T P + RE++A + L +QV
Sbjct: 206 GKDNSDDSNSAKRRGPRTTIKAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQV 264
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 33.9 bits (74), Expect = 0.017
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 22 SQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKI 81
SQ P+ G +G + +R R T++ +Q ELE+ F Y R+EI+ +
Sbjct: 111 SQPVFPWMKMGGAKGG-----ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETL 165
Query: 82 DLTEARVQV 90
LTE +V++
Sbjct: 166 HLTERQVKI 174
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 33.9 bits (74), Expect = 0.017
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 22 SQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKI 81
SQ P+ G +G + +R R T++ +Q ELE+ F Y R+EI+ +
Sbjct: 100 SQPVFPWMKMGGAKGG-----ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETL 154
Query: 82 DLTEARVQV 90
LTE +V++
Sbjct: 155 HLTERQVKI 163
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 33.9 bits (74), Expect = 0.017
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 22 SQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKI 81
SQ P+ G +G + +R R T++ +Q ELE+ F Y R+EI+ +
Sbjct: 100 SQPVFPWMKMGGAKGG-----ESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETL 154
Query: 82 DLTEARVQV 90
LTE +V++
Sbjct: 155 HLTERQVKI 163
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.040
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
H L +R RTT ++ L+ L++A+Q + P + RE++A + L VQV
Sbjct: 170 HCNELEGDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQV 226
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.040
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
H L +R RTT ++ L+ L++A+Q + P + RE++A + L VQV
Sbjct: 170 HCNELEGDGSNKRPRTTISAKSLETLKQAYQTSSKPARHVREQLASETGLDMRVVQV 226
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 31.9 bits (69), Expect = 0.070
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R+ R +T AQ ELE+ F Y R E+A + LTE +V++
Sbjct: 200 RKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKI 245
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 31.9 bits (69), Expect = 0.070
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R+ R +T AQ ELE+ F Y R E+A + LTE +V++
Sbjct: 200 RKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKI 245
>M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein.
Length = 60
Score = 30.7 bits (66), Expect = 0.16
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
++R RT +T Q+ ELE+ F Y R E+A + LTE + Q
Sbjct: 1 EKRQRTAYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQGQ 46
>X17075-1|CAA34927.1| 75|Caenorhabditis elegans ceh-11 protein.
Length = 75
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R T+ Q LE FQ++ Y REE+ ++ LT+ ++++
Sbjct: 6 RQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 48
>L19247-1|AAC37166.1| 223|Caenorhabditis elegans homeobox protein
protein.
Length = 223
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R T+ Q LE FQ++ Y REE+ ++ LT+ ++++
Sbjct: 116 RQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 158
>L15201-6|AAP82660.1| 222|Caenorhabditis elegans Egg laying
defective protein 5,isoform c protein.
Length = 222
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R T+ Q LE FQ++ Y REE+ ++ LT+ ++++
Sbjct: 115 RQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 157
>L15201-5|AAA27943.2| 219|Caenorhabditis elegans Egg laying
defective protein 5,isoform a protein.
Length = 219
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R T+ Q LE FQ++ Y REE+ ++ LT+ ++++
Sbjct: 112 RQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 154
>L15201-4|AAN84878.1| 223|Caenorhabditis elegans Egg laying
defective protein 5,isoform b protein.
Length = 223
Score = 30.3 bits (65), Expect = 0.21
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 48 RTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
R T+ Q LE FQ++ Y REE+ ++ LT+ ++++
Sbjct: 116 RQTYQRYQTSVLEAKFQQSSYVSKKQREELRLQTQLTDRQIKI 158
>Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical
protein K02B12.1 protein.
Length = 380
Score = 29.9 bits (64), Expect = 0.28
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAM 79
++S TG P + G KRK+R T+ LE FQ P+ ++AM
Sbjct: 260 ADSTTGSPNSTFEKMTGQAGRKRKKR---TSIEVNVKSRLEFHFQSNQKPNAQEITQVAM 316
Query: 80 KIDLTEARVQV 90
++ L + V+V
Sbjct: 317 ELQLEKEVVRV 327
>AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family III
homeodomain proteinCEH-6 protein.
Length = 380
Score = 29.9 bits (64), Expect = 0.28
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 20 SESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAM 79
++S TG P + G KRK+R T+ LE FQ P+ ++AM
Sbjct: 260 ADSTTGSPNSTFEKMTGQAGRKRKKR---TSIEVNVKSRLEFHFQSNQKPNAQEITQVAM 316
Query: 80 KIDLTEARVQV 90
++ L + V+V
Sbjct: 317 ELQLEKEVVRV 327
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 29.9 bits (64), Expect = 0.28
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIA 78
QRR R F ++ LE F +T +PD+ R EIA
Sbjct: 215 QRRERYVFRPILIRMLESFFTQTPFPDLPRRVEIA 249
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 29.5 bits (63), Expect = 0.37
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K+R RTT QL L F T P + R ++A++ L+ +QV
Sbjct: 208 KRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQV 255
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 29.5 bits (63), Expect = 0.37
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K+R RTT QL L F T P + R ++A++ L+ +QV
Sbjct: 216 KRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQV 263
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 29.5 bits (63), Expect = 0.37
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K+R RTT QL L F T P + R ++A++ L+ +QV
Sbjct: 208 KRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQV 255
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 29.5 bits (63), Expect = 0.37
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
K+R RTT QL L F T P + R ++A++ L+ +QV
Sbjct: 216 KRRGPRTTIKQNQLDVLNEMFSNTPKPSKHARAKLALETGLSMRVIQV 263
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 29.5 bits (63), Expect = 0.37
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLT 84
T +R RT FT QL+ L++ F + YP E ++ K+ L+
Sbjct: 1034 TSSSGRRANRTRFTDFQLRTLQQFFDKQAYPKDDDLEALSKKLQLS 1079
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 28.7 bits (61), Expect = 0.65
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
++ +R RT + Q ++ + AF+ + P RE++A + L+ VQV
Sbjct: 160 RKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLANETGLSVRVVQV 209
>M22363-2|AAA28159.1| 429|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 429
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 15 IHRIYSESQTGLPYK-VYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYT 73
+H +++ + K G G L K+R+ RT+ + + +ELE+ F++ P
Sbjct: 296 LHSWLEKAEEAMKQKDTIGDINGILPNTDKKRK-RTSIAAPEKRELEQFFKQQPRPSGER 354
Query: 74 REEIAMKIDLTEARVQV 90
IA ++DL + V+V
Sbjct: 355 IASIADRLDLKKNVVRV 371
>M22363-1|AAA28158.1| 467|Caenorhabditis elegans protein (
C.elegans unc-86 geneencoding two alternative proteins,
complete cds. ).
Length = 467
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 15 IHRIYSESQTGLPYK-VYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYT 73
+H +++ + K G G L K+R+ RT+ + + +ELE+ F++ P
Sbjct: 334 LHSWLEKAEEAMKQKDTIGDINGILPNTDKKRK-RTSIAAPEKRELEQFFKQQPRPSGER 392
Query: 74 REEIAMKIDLTEARVQV 90
IA ++DL + V+V
Sbjct: 393 IASIADRLDLKKNVVRV 409
>L10990-6|AAB59176.1| 467|Caenorhabditis elegans Uncoordinated
protein 86, isoform b protein.
Length = 467
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 15 IHRIYSESQTGLPYK-VYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYT 73
+H +++ + K G G L K+R+ RT+ + + +ELE+ F++ P
Sbjct: 334 LHSWLEKAEEAMKQKDTIGDINGILPNTDKKRK-RTSIAAPEKRELEQFFKQQPRPSGER 392
Query: 74 REEIAMKIDLTEARVQV 90
IA ++DL + V+V
Sbjct: 393 IASIADRLDLKKNVVRV 409
>L10990-5|AAB59175.1| 429|Caenorhabditis elegans Uncoordinated
protein 86, isoform a protein.
Length = 429
Score = 27.9 bits (59), Expect = 1.1
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 15 IHRIYSESQTGLPYK-VYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYT 73
+H +++ + K G G L K+R+ RT+ + + +ELE+ F++ P
Sbjct: 296 LHSWLEKAEEAMKQKDTIGDINGILPNTDKKRK-RTSIAAPEKRELEQFFKQQPRPSGER 354
Query: 74 REEIAMKIDLTEARVQV 90
IA ++DL + V+V
Sbjct: 355 IASIADRLDLKKNVVRV 371
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVAKEL 94
T K+K+++ FT ++K ++F++ P + EEIA +L E K+L
Sbjct: 1013 TGKKKKKKAVGNFTIPEIKRFIKSFRKFSMP-LNRLEEIAQDAELEEHSTDEMKKL 1067
>Z81545-5|CAB04440.1| 389|Caenorhabditis elegans Hypothetical
protein F49H6.5 protein.
Length = 389
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 23 QTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKID 82
Q +P + + LT ++K+ ++ +++E+ERA + + D++ RE ++I
Sbjct: 25 QLTVPLREHAEPIVLLTPEQKREAVKV-----KIQEIERAKGQLPFFDMFMREHTYLRIS 79
Query: 83 LTE 85
LTE
Sbjct: 80 LTE 82
>U00033-14|AAY44014.1| 215|Caenorhabditis elegans Hypothetical
protein F37C12.18 protein.
Length = 215
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 17 RIYSESQTGLP--YKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPD 70
R YS + G+P + HE +L ++ RR RT+ K +FQE+ D
Sbjct: 15 RNYSPREIGIPTIFTPVPPHEKALIAEQSLRRFRTSVAKTPSKSDMSSFQESTAAD 70
>U28993-8|AAK31496.1| 632|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform a protein.
Length = 632
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIA--MKIDLT 84
+R R FT Q + L+ F+ET P ++ IA +++DL+
Sbjct: 419 KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLS 460
>U28993-7|AAL27244.1| 641|Caenorhabditis elegans C.elegans homeobox
protein 38,isoform b protein.
Length = 641
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIA--MKIDLT 84
+R R FT Q + L+ F+ET P ++ IA +++DL+
Sbjct: 428 KRPRLVFTDIQKRTLQAIFKETQRPSREMQQTIAEHLRLDLS 469
>U23139-11|AAK31490.1| 328|Caenorhabditis elegans Hypothetical
protein F13H8.9 protein.
Length = 328
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 8 AGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRI 47
AG+I + + +++ T + +K YG G+L K +RI
Sbjct: 133 AGKIPVNVRSLSADAVTVVGHKFYGPRSGALIFNPKSKRI 172
>Z75543-5|CAA99872.2| 270|Caenorhabditis elegans Hypothetical
protein K01D12.5 protein.
Length = 270
Score = 26.2 bits (55), Expect = 3.5
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 16 HRIYSESQT-GLPYKVYGSHEGS 37
H YS QT G PY++YGS GS
Sbjct: 90 HTGYSNIQTVGQPYQMYGSAPGS 112
>U41017-6|AAC48215.1| 399|Caenorhabditis elegans C.elegans homeobox
protein 39 protein.
Length = 399
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
T +R R TFT QL L FQ+ P+ ++ ++ + L + V
Sbjct: 312 TTPSDERIRRFTFTQTQLDSLHTVFQQQDRPNREMQQALSATLKLNRSTV 361
>Z74029-6|CAM84812.1| 457|Caenorhabditis elegans Hypothetical
protein C45B11.6 protein.
Length = 457
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 51 FTSAQLKELERAFQETHYPDIYTREEIAMKIDL 83
+ ++ K+L F ET+ +++T +EIA +I L
Sbjct: 330 YIESRWKQLSTFFAETNLNELFTMDEIATEIYL 362
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans homeobox
protein 44,isoform a protein.
Length = 1273
Score = 25.8 bits (54), Expect = 4.6
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 11 INCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRI-RTTFTSAQLKELERAFQETHYP 69
+ KI + + + P K S + + ++ I RT T Q L F +P
Sbjct: 1069 VKAKIESVPAPREAPRPVKRKHSSDTDDYDLNTKKPIQRTVITDYQKDTLRFVFVNEQHP 1128
Query: 70 DIYTREEIAMKIDLTEARVQ 89
E+I++K+D++ VQ
Sbjct: 1129 SNELCEQISLKLDMSLRTVQ 1148
>Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical
protein M7.2 protein.
Length = 516
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 36 GSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVAKEL 94
G +T++ ++ + L RAF E H I T+ ++A + L + + Q A+E+
Sbjct: 334 GIVTQQLEKYEETENYFKQALSIYNRAFPENHQNVIKTKNQLA-SVFLKQGKYQEAEEM 391
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 25.4 bits (53), Expect = 6.1
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 27 PYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 86
P ++G E +L EK K +AQLK + H + +E+ +++
Sbjct: 392 PKLIFGESEQTLIEKVKNNSKAVASLNAQLKNELSYTKAVHKRILKDKEQCIEELENRIM 451
Query: 87 RVQVAKELRT 96
+++ KE T
Sbjct: 452 KLETLKETET 461
>Z46267-2|CAC42301.1| 600|Caenorhabditis elegans Hypothetical
protein F49E2.1b protein.
Length = 600
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 23 QTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKID 82
Q +P + + +LT ++K+ +R +++E+E + + D++ RE ++I
Sbjct: 25 QLTVPLREHAEPILTLTPEQKREAVRL-----KIQEIEHTKGQPPFFDMFMREHTYLRIS 79
Query: 83 LTE 85
LTE
Sbjct: 80 LTE 82
>Z46267-1|CAC42302.1| 389|Caenorhabditis elegans Hypothetical
protein F49E2.1a protein.
Length = 389
Score = 25.4 bits (53), Expect = 6.1
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 23 QTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKID 82
Q +P + + +LT ++K+ +R +++E+E + + D++ RE ++I
Sbjct: 25 QLTVPLREHAEPILTLTPEQKREAVRL-----KIQEIEHTKGQPPFFDMFMREHTYLRIS 79
Query: 83 LTE 85
LTE
Sbjct: 80 LTE 82
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 32 GSHEGSLTEKRKQR---RIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
G S +K+K + R+RT QLK L + PD +E + L+ +
Sbjct: 250 GGSTSSCGKKKKDKQATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVI 309
Query: 89 QV 90
+V
Sbjct: 310 RV 311
>U72347-1|AAD12189.1| 101|Caenorhabditis elegans putative
transcription factor LIM-6 protein.
Length = 101
Score = 25.0 bits (52), Expect = 8.0
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIA 78
++ +R RT + Q ++ + AF+ + P RE++A
Sbjct: 60 RKTPKRPRTILNAQQRRQFKTAFERSSKPSRKVREQLA 97
>AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical
protein Y38E10A.22 protein.
Length = 305
Score = 25.0 bits (52), Expect = 8.0
Identities = 11/23 (47%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 70 DIYTREEIAMKIDLTEARVQVAK 92
DIYT+EE+A K+ L +A +++A+
Sbjct: 275 DIYTKEELAEKLKL-DAEMEMAE 296
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 25.0 bits (52), Expect = 8.0
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 32 GSHEGSLTEKRKQR---RIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
G S +K+K + R+RT QLK L + PD +E + L+ +
Sbjct: 250 GGSTSSCGKKKKDKQATRVRTVLNENQLKILRDCYSINSRPDATLKERLVEMTGLSARVI 309
Query: 89 QV 90
+V
Sbjct: 310 RV 311
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,009,444
Number of Sequences: 27539
Number of extensions: 66595
Number of successful extensions: 342
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 222
Number of HSP's gapped (non-prelim): 129
length of query: 96
length of database: 12,573,161
effective HSP length: 70
effective length of query: 26
effective length of database: 10,645,431
effective search space: 276781206
effective search space used: 276781206
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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