Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001200-TA|BGIBMGA001200-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(96 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 44 2e-07
M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee homeobox-... 42 1e-06
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 40 4e-06
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 36 9e-05
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 32 0.001
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 32 0.001
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 32 0.001
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 25 0.16
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 0.50
AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein. 22 1.1
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 44.4 bits (100), Expect = 2e-07
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 40 EKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
++R+ RR RT FT QL LE F+ T Y + R +A+ + LTE +V++
Sbjct: 4 DRREARRARTAFTYEQLVALENKFKTTRYLSVCERLNLALSLSLTETQVKI 54
>M29491-1|AAA27726.1| 79|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H17. ).
Length = 79
Score = 41.9 bits (94), Expect = 1e-06
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 37 SLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+L + + R+ RT FT+ QL LE+ F+E Y I R E + + LTE +V++
Sbjct: 2 TLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLTIAERAEFSSSLHLTETQVKI 55
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 40.3 bits (90), Expect = 4e-06
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 29 KVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARV 88
+V SH G +++R RT F++ QL L+R F E Y R++++ + LTEA++
Sbjct: 6 RVKRSHNGK-NGSPEEKRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQI 64
Query: 89 QV 90
++
Sbjct: 65 KI 66
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 35.9 bits (79), Expect = 9e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 44 QRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+RR R T+T Q ELE+ F HY R EIA + LTE ++++
Sbjct: 8 RRRGRQTYTRFQTLELEKEFHYNHYLTRRRRIEIAHALCLTERQIKI 54
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 31.9 bits (69), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+++R R T+T Q ELE+ F Y R EIA + LTE ++++
Sbjct: 7 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKI 54
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 31.9 bits (69), Expect = 0.001
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 45 RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+R RT++T Q ELE+ F Y R EIA + LTE ++++
Sbjct: 9 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKI 54
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 31.9 bits (69), Expect = 0.001
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 43 KQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+++R R T+T Q ELE+ F Y R EIA + LTE ++++
Sbjct: 269 ERKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKI 316
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis
mellifera ORF for hypotheticalprotein. ).
Length = 998
Score = 25.0 bits (52), Expect = 0.16
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 33 SHEGS-LTEKRKQRRIRTTFTSAQLKELERA 62
S+E S L+ R +RT+F+SA+L++L RA
Sbjct: 8 SNEDSYLSAGRPSNLLRTSFSSAKLEKLYRA 38
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.4 bits (48), Expect = 0.50
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 33 SHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEI 77
+ +G R +RR +T Q++E+ R F REEI
Sbjct: 125 TRQGLTLHYRSKRRGFVYYTMGQIREVARHFYHKELQIELVREEI 169
>AB248729-1|BAF02606.1| 43|Apis mellifera distal-less protein.
Length = 43
Score = 22.2 bits (45), Expect = 1.1
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 64 QETHYPDIYTREEIAMKIDLTEARVQV 90
Q T Y + R E+A + LT+ +V++
Sbjct: 1 QRTQYLALPERAELAASLGLTQTQVKI 27
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,313
Number of Sequences: 429
Number of extensions: 763
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 96
length of database: 140,377
effective HSP length: 49
effective length of query: 47
effective length of database: 119,356
effective search space: 5609732
effective search space used: 5609732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)
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