Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001200-TA|BGIBMGA001200-PA|IPR001356|Homeobox,
IPR009057|Homeodomain-like
(96 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73360.1 68414.m08491 homeobox-leucine zipper family protein ... 38 0.001
At1g28420.1 68414.m03494 homeobox transcription factor, putative... 38 0.001
At1g17920.1 68414.m02218 homeobox-leucine zipper family protein ... 35 0.010
At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-... 34 0.017
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 33 0.023
At4g17710.1 68417.m02645 homeobox-leucine zipper family protein ... 31 0.091
At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to... 31 0.12
At5g52170.1 68418.m06476 homeobox-leucine zipper family protein ... 31 0.16
At1g05230.2 68414.m00529 homeobox-leucine zipper family protein ... 31 0.16
At1g05230.1 68414.m00528 homeobox-leucine zipper family protein ... 31 0.16
At2g36610.1 68415.m04488 homeobox-leucine zipper family protein ... 30 0.21
At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) / ovule... 30 0.28
At4g04890.1 68417.m00712 homeobox-leucine zipper protein protode... 29 0.37
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica... 29 0.48
At5g46880.1 68418.m05777 homeobox-leucine zipper family protein ... 29 0.64
At3g61150.1 68416.m06843 homeobox-leucine zipper family protein ... 29 0.64
At4g24490.1 68417.m03510 geranylgeranyl transferase alpha subuni... 28 0.85
At2g32370.1 68415.m03956 homeobox-leucine zipper family protein ... 28 0.85
At2g21550.1 68415.m02565 bifunctional dihydrofolate reductase-th... 28 1.1
At5g17320.1 68418.m02029 homeobox-leucine zipper family protein ... 27 2.0
At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3) iden... 27 2.0
At1g23880.1 68414.m03012 NHL repeat-containing protein contains ... 27 2.0
At4g03090.1 68417.m00417 expressed protein 26 3.4
At3g11130.1 68416.m01349 clathrin heavy chain, putative similar ... 26 3.4
At3g08530.1 68416.m00990 clathrin heavy chain, putative similar ... 26 3.4
At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not full... 26 3.4
At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not full... 26 3.4
At1g12250.1 68414.m01417 thylakoid lumenal protein-related weak ... 26 4.5
At3g03260.1 68416.m00322 homeobox-leucine zipper family protein ... 25 6.0
At5g22310.1 68418.m02603 expressed protein 25 7.9
At5g03790.1 68418.m00346 homeobox-leucine zipper family protein ... 25 7.9
At2g32170.1 68415.m03932 expressed protein ;supported by cDNA GI... 25 7.9
At1g64880.1 68414.m07355 ribosomal protein S5 family protein con... 25 7.9
>At1g73360.1 68414.m08491 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein
protodermal factor2 (GI:14276060) [Arabidopsis
thaliana]; similar to homeobox protein GI:1173621 from
[ Phalaenopsis sp.]
Length = 722
Score = 37.5 bits (83), Expect = 0.001
Identities = 17/56 (30%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
H+GS T+++K+R R T+ Q++ LE +F+E +PD R +++ ++ L +++
Sbjct: 24 HDGSETDRKKKRYHR--HTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIK 77
>At1g28420.1 68414.m03494 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7 GI:19486
[Lycopersicon peruvianum]
Length = 1703
Score = 37.5 bits (83), Expect = 0.001
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 42 RKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
+ +R+++T F QL+ LE+ + E YP TR E++ K+DL++ ++Q+
Sbjct: 38 KPKRQMKTPF---QLETLEKVYSEEKYPSEATRAELSEKLDLSDRQLQM 83
>At1g17920.1 68414.m02218 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to A20 (GI:1881536) [Arabidopsis thaliana]; similar to
homeobox protein GI:1173622 from [Phalaenopsis sp.
SM9108]
Length = 687
Score = 34.7 bits (76), Expect = 0.010
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 33 SHEGSLTEKRKQRRIRT-TFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
+H+ S TEK+ +++ R T Q++ LE F E +PD R +++ ++ L +++
Sbjct: 9 NHDSSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSRELGLAPRQIK 66
>At1g79840.1 68414.m09327 homeobox-leucine zipper protein 10 (HB-10)
/ HD-ZIP transcription factor 10 / homeobox protein
(GLABRA2) identical to homeobox protein (GLABRA2)
(homeobox-leucine zipper protein ATHB-10) (HD-ZIP
protein ATHB-10) GB:P46607 [Arabidopsis thaliana]
Length = 747
Score = 33.9 bits (74), Expect = 0.017
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
T KRK+++ T+ Q++ +E F+ET +PD R++++ ++ L +V+
Sbjct: 97 TNKRKRKKYHR-HTTDQIRHMEALFKETPHPDEKQRQQLSKQLGLAPRQVK 146
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome
deletion transcript 9 [Homo sapiens]; contains Pfam
PF02791: DDT domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 33.5 bits (73), Expect = 0.023
Identities = 16/56 (28%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 35 EGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
EG E + +R+++T +AQL+ LE + YP R ++++K++L++ ++Q+
Sbjct: 11 EGCGGESKSKRKMKT---AAQLEVLENTYSAEPYPSEAIRADLSVKLNLSDRQLQM 63
>At4g17710.1 68417.m02645 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL4 protein (GI:8920425) [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 709
Score = 31.5 bits (68), Expect = 0.091
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 52 TSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
T++Q++++E F+E +PD TR ++ K+ L+ +V+
Sbjct: 96 TASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVK 133
>At3g19510.1 68416.m02472 homeobox protein (HAT 3.1) identical to
homeotic protein HAT 3.1 (GI:11994474) [Arabidopsis
thaliana]
Length = 723
Score = 31.1 bits (67), Expect = 0.12
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 26 LPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTE 85
+P + G + GS E K T + + L +FQE YPD T+E +A ++ +T
Sbjct: 597 MPQEGPGENGGS-GEIEKSSSSACKQTDPKTQRLYISFQENQYPDKATKESLAKELQMTV 655
Query: 86 ARV 88
+V
Sbjct: 656 KQV 658
>At5g52170.1 68418.m06476 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
Anthocyaninless2 (ANL2) (GP:5702094) [Arabidopsis
thaliana]; contains Pfam PF00046: Homeobox domain and
Pfam PF01852: START domain
Length = 682
Score = 30.7 bits (66), Expect = 0.16
Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 41 KRKQRRIRT-TFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
K+K+R+ + TS Q++ELE F+E +P+ R E+ K+ L +++
Sbjct: 53 KKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIK 102
>At1g05230.2 68414.m00529 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
homeobox 1 (GP:12002853) {Picea abies}; Strong
similarity to Phalaenopsis homeobox protein (gb|U34743)
Length = 721
Score = 30.7 bits (66), Expect = 0.16
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
G+ + L +K+R R T Q++E+E F+E +PD R++++ +++L +V+
Sbjct: 54 GNDQDPLHPNKKKRYHR--HTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVK 109
>At1g05230.1 68414.m00528 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
homeobox 1 (GP:12002853) {Picea abies}; Strong
similarity to Phalaenopsis homeobox protein (gb|U34743)
Length = 721
Score = 30.7 bits (66), Expect = 0.16
Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 32 GSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
G+ + L +K+R R T Q++E+E F+E +PD R++++ +++L +V+
Sbjct: 54 GNDQDPLHPNKKKRYHR--HTQLQIQEMEAFFKECPHPDDKQRKQLSRELNLEPLQVK 109
>At2g36610.1 68415.m04488 homeobox-leucine zipper family protein
similar to homeobox protein PpHB8 (GP:7415628)
[Physcomitrella patens]; contains PfamPF00046: Homeobox
domain
Length = 185
Score = 30.3 bits (65), Expect = 0.21
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 31 YGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
YG S + K+++ TS QLK LER+FQE +I + MK++ + ++++
Sbjct: 58 YGEESNSFNGQEKKKK---KMTSEQLKFLERSFQE----EIKLNPDRKMKLN-PDRKMKL 109
Query: 91 AKEL 94
+KEL
Sbjct: 110 SKEL 113
>At4g21750.1 68417.m03148 L1 specific homeobox gene (ML1) /
ovule-specific homeobox protein A20 nearly identical to
meristem L1 layer homeobox protein A20 (AtML1)
[Arabidopsis thaliana] GI:1881536, protodermal factor2
(PDF2) [Arabidopsis thaliana] GI:14276060
Length = 762
Score = 29.9 bits (64), Expect = 0.28
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 52 TSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
T Q++ELE F+E +PD R+E++ ++ L +V+
Sbjct: 70 TQRQIQELESFFKECPHPDDKQRKELSRELSLEPLQVK 107
>At4g04890.1 68417.m00712 homeobox-leucine zipper protein
protodermal factor 2 (PDF2) identical to GP|14276060|
protodermal factor2 (GI:14276060)
Length = 743
Score = 29.5 bits (63), Expect = 0.37
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 52 TSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
T Q++ELE F+E +PD R+E++ ++L +V+
Sbjct: 70 TQRQIQELESFFKECPHPDDKQRKELSRDLNLEPLQVK 107
>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
Length = 802
Score = 29.1 bits (62), Expect = 0.48
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 9 GEINCKIHRIYSESQTGLP-YKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETH 67
G +N + ES++G + + +K +++ T Q++ELE F+E
Sbjct: 98 GSVNRRSREEEHESRSGSDNVEGISGEDQDAADKPPRKKRYHRHTPQQIQELESMFKECP 157
Query: 68 YPDIYTREEIAMKIDLTEARVQ 89
+PD R E++ ++ L +V+
Sbjct: 158 HPDEKQRLELSKRLCLETRQVK 179
>At5g46880.1 68418.m05777 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL4 protein GI:8920425 from [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 820
Score = 28.7 bits (61), Expect = 0.64
Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 34 HEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
H+ K++R T+ Q++E+E F+E +PD R+ ++ ++ L +V+
Sbjct: 102 HDDEQPPPAKKKRYHR-HTNRQIQEMEALFKENPHPDDKQRKRLSAELGLKPRQVK 156
>At3g61150.1 68416.m06843 homeobox-leucine zipper family protein /
homeodomain GLABRA2 like protein 1 (HD-GL2-1) similar to
Anthocyaninless2 (ANL2) (GP:5702094) Arabidopsis
thaliana, EMBL:AF077335
Length = 808
Score = 28.7 bits (61), Expect = 0.64
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
K+K+R R T Q+++LE F+E +PD R +++ +++L +V+
Sbjct: 109 KKKKRYHR--HTPKQIQDLESVFKECAHPDEKQRLDLSRRLNLDPRQVK 155
>At4g24490.1 68417.m03510 geranylgeranyl transferase alpha
subunit-related / RAB geranylgeranyltransferase alpha
subunit-related low similarity to SP|Q08602 [Rattus
norvegicus]
Length = 683
Score = 28.3 bits (60), Expect = 0.85
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 53 SAQLKELERAFQETHYPDIYTREEIAMKIDLTE 85
+ QL+ L+ F H+ IYT E I + L E
Sbjct: 21 AVQLRSLQSQFMTNHHDKIYTNEAIELSTKLLE 53
>At2g32370.1 68415.m03956 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar to
HD-Zip homeo domain OCL5 protein (GI:8920427) [Zea
mays]; contains Pfam PF00046: Homeobox domain and Pfam
PF01852: START domain
Length = 721
Score = 28.3 bits (60), Expect = 0.85
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 31 YGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
+G G+ R +++ T Q+ E+E F+E +PD R +++ ++ L +++
Sbjct: 55 HGEGLGNNQAPRHKKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIK 113
>At2g21550.1 68415.m02565 bifunctional dihydrofolate
reductase-thymidylate synthase, putative / DHFR-TS,
putative similar to THY-1 [SP| Q05762] and THY-2
[SP|Q05763] from Arabidopsis thaliana; contains Pfam
profiles PF00303 thymidylate synthase and PF00186
dihydrofolate reductase
Length = 492
Score = 27.9 bits (59), Expect = 1.1
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 5 FVEAGEINCKIHRIYSESQTGLPYKV 30
+V GE++C+I++ +E+ G+P+ +
Sbjct: 393 YVANGEVSCQIYQSSTEASIGIPFSI 418
>At5g17320.1 68418.m02029 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to Roc1 (GI:1907210) [Oryza sativa]; contains Pfam
PF00046: Homeobox domain and Pfam PF01852: START domain
Length = 718
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/51 (23%), Positives = 27/51 (52%)
Query: 39 TEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
T R +++ T+ Q+ LE F+E +PD + R + +++L +++
Sbjct: 21 TNNRHEKKGYHRHTNEQIHRLETYFKECPHPDEFQRRLLGEELNLKPKQIK 71
>At1g73730.1 68414.m08537 ethylene-insensitive3-like3 (EIL3)
identical to ethylene-insensitive3-like3 (EIL3)
GB:AF004215 [Arabidopsis thaliana] (Cell 89 (7),
1133-1144 (1997))
Length = 567
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 16 HRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDI 71
++I E T + + V + +RK+ RIR+ + Q +E A Q PD+
Sbjct: 341 NQIQKEQPTAISHSVRDQDKAEKHRRRKRPRIRSGTVNRQEEEQPEAQQRNILPDM 396
>At1g23880.1 68414.m03012 NHL repeat-containing protein contains
Pfam profile PF01436: NHL repeat
Length = 545
Score = 27.1 bits (57), Expect = 2.0
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 21 ESQTGLPYKVYGSHEGSLTEKRKQ-RRIRTTFTSAQLKELERAFQETH 67
ES+ P K+Y TEK +Q R+ R + S + L+ QE H
Sbjct: 439 ESRNATPGKIYPFMSKDATEKMQQLRQSRALYRSLDAEFLQEQQQEKH 486
>At4g03090.1 68417.m00417 expressed protein
Length = 877
Score = 26.2 bits (55), Expect = 3.4
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 6 VEAGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQE 65
VE GE+ + + + S +G + S + EK+K++R R+ + Q+ +E+A E
Sbjct: 633 VEEGELVQNMSKRFKGSASGEVKEDEKSETFLVFEKQKKKRKRSIMNADQMGMIEKALAE 692
Query: 66 THYPDI 71
PD+
Sbjct: 693 E--PDL 696
>At3g11130.1 68416.m01349 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1705
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 47 IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87
I + Q+KE+ER +E+++ D + M+ L +AR
Sbjct: 746 IEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDAR 786
>At3g08530.1 68416.m00990 clathrin heavy chain, putative similar to
Swiss-Prot:Q00610 clathrin heavy chain 1 (CLH-17) [Homo
sapiens]
Length = 1703
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 47 IRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEAR 87
I + Q+KE+ER +E+++ D + M+ L +AR
Sbjct: 746 IEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEAKLPDAR 786
>At1g79090.2 68414.m09222 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/83 (18%), Positives = 36/83 (43%)
Query: 5 FVEAGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQ 64
++ AGEI + + + PY H+ L +K +++ F L++L++ +
Sbjct: 391 YMSAGEIENILRMQLVATHSNDPYVDDYYHQACLAKKSAGAKLKHHFCPNHLRDLQQRAR 450
Query: 65 ETHYPDIYTREEIAMKIDLTEAR 87
+ P + + E ++ + R
Sbjct: 451 SNNEPHAFLQVEALGRVPFSSIR 473
>At1g79090.1 68414.m09221 expressed protein 11408 (cDNA not
full-length)
Length = 793
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/83 (18%), Positives = 36/83 (43%)
Query: 5 FVEAGEINCKIHRIYSESQTGLPYKVYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQ 64
++ AGEI + + + PY H+ L +K +++ F L++L++ +
Sbjct: 391 YMSAGEIENILRMQLVATHSNDPYVDDYYHQACLAKKSAGAKLKHHFCPNHLRDLQQRAR 450
Query: 65 ETHYPDIYTREEIAMKIDLTEAR 87
+ P + + E ++ + R
Sbjct: 451 SNNEPHAFLQVEALGRVPFSSIR 473
>At1g12250.1 68414.m01417 thylakoid lumenal protein-related weak
similarity to SP|O22160 Thylakoid lumenal 15 kDa
protein, chloroplast precursor (p15) {Arabidopsis
thaliana}; contains Pfam profile PF00805: Pentapeptide
repeats (8 copies)
Length = 280
Score = 25.8 bits (54), Expect = 4.5
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 31 YGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEA 86
YGS + S T + R FTSA ++E + F + + Y + +A K + + A
Sbjct: 111 YGSADLSKTVHSNENFRRANFTSADMRESD--FSGSTFNGAYLEKAVAYKANFSGA 164
>At3g03260.1 68416.m00322 homeobox-leucine zipper family protein /
lipid-binding START domain-containing protein similar
to L1 specific homeobox gene ATML1/ovule-specific
homeobox protein A20, GB:CAB36819
Length = 699
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 41 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
K+ +R T Q++ LE F+E +PD R ++ ++ L +++
Sbjct: 20 KQNGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCRELKLEPDQIK 68
>At5g22310.1 68418.m02603 expressed protein
Length = 481
Score = 25.0 bits (52), Expect = 7.9
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 57 KELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
KE+E+ + H D+ E + MK LTEA+ +
Sbjct: 314 KEMEKEREMMHIADVLREERVQMK--LTEAKFE 344
>At5g03790.1 68418.m00346 homeobox-leucine zipper family protein
similar to homeobox-leucine zipper protein Athb-7
(SP:P46897) [Arabidopsis thaliana]; contains Pfam
PF00046: Homeobox domain
Length = 236
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 52 TSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQV 90
TS QL LER+FQE D + +++ ++ L ++ V
Sbjct: 83 TSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAV 121
>At2g32170.1 68415.m03932 expressed protein ;supported by cDNA
GI:20259498
Length = 504
Score = 25.0 bits (52), Expect = 7.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 37 SLTEKRKQRRIRTTFTSAQLKELERAFQETHYP 69
S T K + + IR T ++EL+R H P
Sbjct: 159 SCTYKEESKHIRDPITGVSIEELQRKEAHDHSP 191
>At1g64880.1 68414.m07355 ribosomal protein S5 family protein
contains similarity to 30S ribosomal protein S5
GI:6969105 from [Campylobacter jejuni]
Length = 515
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 30 VYGSHEGSLTEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQ 89
V G++EG + + + T SA K E+ FQ HY + + IA I + + +
Sbjct: 385 VCGNYEGIIGYAKAKAE---TGQSAMQKAYEKCFQNLHYVERHEEHTIAHAIQTSYKKTK 441
Query: 90 V 90
+
Sbjct: 442 L 442
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.130 0.356
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,922,686
Number of Sequences: 28952
Number of extensions: 62207
Number of successful extensions: 221
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 190
Number of HSP's gapped (non-prelim): 35
length of query: 96
length of database: 12,070,560
effective HSP length: 69
effective length of query: 27
effective length of database: 10,072,872
effective search space: 271967544
effective search space used: 271967544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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