Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001199-TA|BGIBMGA001199-PA|undefined
(129 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0056 + 12955832-12956410,12957398-12957499 32 0.13
04_04_0054 + 22400278-22400420,22400545-22401037 31 0.22
08_02_0940 - 22822391-22822781,22822875-22823053,22823079-228234... 31 0.29
03_03_0161 - 14960208-14960406,14960503-14960903 29 1.6
01_01_0602 - 4484972-4485450,4485949-4485997,4486108-4486237,448... 29 1.6
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 28 2.1
09_04_0758 - 19973797-19974651 28 2.1
09_04_0720 - 19720844-19720975,19721582-19721809,19722108-197222... 28 2.1
06_01_0721 - 5255422-5255790,5256287-5256660,5256845-5257192,525... 28 2.7
08_02_0311 - 15635165-15635590,15635777-15638698 27 3.6
03_06_0394 + 33592780-33593310,33593890-33594013,33594233-335943... 27 3.6
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 27 3.6
02_05_0450 - 29117826-29118212,29118307-29118733,29119158-291192... 27 3.6
12_02_0237 - 16087083-16087201,16087531-16088341,16097713-16098156 27 4.8
10_08_0330 - 16816497-16819952 27 4.8
08_01_0682 + 5974622-5974745,5976182-5976371,5976953-5977024,597... 27 6.3
01_01_0876 + 6862321-6862398,6862442-6862747 27 6.3
04_01_0058 + 592846-593185,594641-595182,596298-596987,597078-59... 26 8.3
>12_02_0056 + 12955832-12956410,12957398-12957499
Length = 226
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 16 DTHSRAKPESGGGQPPIRVASYAADSDHWPAFGGARPA 53
+ H +A PE P + VA+ AAD D W A+GG A
Sbjct: 56 ENHHQAPPEVMRSAPAVAVAAAAAD-DEWYAYGGGAAA 92
>04_04_0054 + 22400278-22400420,22400545-22401037
Length = 211
Score = 31.5 bits (68), Expect = 0.22
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 1 MTKELSAKRKVDKCRD-THSRAKPESGGGQPPIRVASYAADSDHWPAFGGARPAPSSR 57
M+ E +R++ + + SR P++ G P++ AAD D GAR AP+++
Sbjct: 119 MSSEAERQRRLQEAAGWSASRRAPDTAGLGRPVKKQKAAADDDEGEEAPGARAAPAAK 176
>08_02_0940 -
22822391-22822781,22822875-22823053,22823079-22823428,
22823522-22823765
Length = 387
Score = 31.1 bits (67), Expect = 0.29
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 44 WPAFGGARPAPSSRLALI-ELGLSFDFEWGERAVLRVGKNYHRGP 87
W A A P PS RL+L+ LGL + E G G + +R P
Sbjct: 53 WAAMAAASPEPSVRLSLVSSLGLHWPSETGRSEAAARGFDVNRAP 97
>03_03_0161 - 14960208-14960406,14960503-14960903
Length = 199
Score = 28.7 bits (61), Expect = 1.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 23 PESGGGQPPIRVASYAADSDHWPAFGG 49
P+ GGG+PP+ S DSD GG
Sbjct: 56 PQPGGGKPPVEGVSGGGDSDGTRGGGG 82
>01_01_0602 -
4484972-4485450,4485949-4485997,4486108-4486237,
4486636-4486778,4486819-4486877,4487167-4487200,
4487489-4487629,4487719-4487907,4488027-4488122,
4488163-4488225,4488588-4489097
Length = 630
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 1 MTKELSAKRKVDKCRDTHSRAKPESGGGQPPIRVASYAADSDHWPAFGGARPAPSSRL-- 58
+ K+ ++ R+ R + R+K S G P+R A + S P +RP P R
Sbjct: 546 IVKDTTSSRRRSPIR-SQPRSKSTSSGKAKPVRSAKPSKSSSPSPKVAKSRPRPEGRKGD 604
Query: 59 ALIELG 64
AL +LG
Sbjct: 605 ALNKLG 610
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 5 LSAKRKVDKCRDTHSRAKPESGGGQPPIRVASYAADSDHWPAFG-GARPAPSS 56
LS K +H +P SGGG P S + DS + A+G +RP+ +S
Sbjct: 66 LSPKNDGSSNSPSHFNGRPSSGGGSRPSTAGSESLDSPN--AWGSSSRPSTAS 116
>09_04_0758 - 19973797-19974651
Length = 284
Score = 28.3 bits (60), Expect = 2.1
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 44 WPAFGGARPAPSSRLALIELGLSFDFEWGERAVLRVGKN---YHRGPIPSVIGIIQYTRG 100
WP F G +P S L+ EL SF+ +R R G+ GP S + + R
Sbjct: 64 WPVFAGGSLSPDSELS--ELPRSFEAAAAQRPAKRRGRKPGPRPDGPTVSHVEAERQRRE 121
Query: 101 SSNYVVVNLRAA-PSHTRRSR 120
N +LRAA P+ +R +
Sbjct: 122 KLNRRFCDLRAAVPTVSRMDK 142
>09_04_0720 -
19720844-19720975,19721582-19721809,19722108-19722290,
19722361-19722476,19722684-19722836,19722977-19723120,
19723257-19723380,19723548-19724479,19725245-19725422
Length = 729
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 50 ARPAPSSRLALIELGLSFDFEWGERAVLRVGKNYHRGP 87
A + S L I+ GLS F+ GER VG Y+ P
Sbjct: 390 ANKSEDSPLKAIDFGLSVFFKPGERFTQVVGSTYYMAP 427
>06_01_0721 -
5255422-5255790,5256287-5256660,5256845-5257192,
5257369-5257497,5257585-5257658,5257745-5257816,
5257901-5257969,5258059-5258130,5258208-5258279,
5258512-5258583,5258735-5258806,5258887-5258958,
5259050-5259121,5259203-5259274,5259427-5259498,
5259599-5259670,5259764-5259832,5260072-5260143,
5260428-5260499,5260579-5260650,5260919-5260990,
5261015-5261161,5261249-5261378,5262212-5262290
Length = 931
Score = 27.9 bits (59), Expect = 2.7
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 65 LSFDFEWGERAVLRVGKNYHRGPIPSVIGIIQ 96
+ F+ + + A L + N GPIPSVIG++Q
Sbjct: 226 IPFNIGFLQVATLSLQGNMFTGPIPSVIGLMQ 257
Score = 27.9 bits (59), Expect = 2.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 75 AVLRVGKNYHRGPIPSVIGIIQYT 98
AVL + N GPIPS++G + YT
Sbjct: 260 AVLDLSYNQLSGPIPSILGNLTYT 283
>08_02_0311 - 15635165-15635590,15635777-15638698
Length = 1115
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 18 HSRAKPESGGGQPPIRVASYAADSDHWP 45
H R QP ++ A++ AD HWP
Sbjct: 518 HLRETGADPSEQPKVKKATWMADGSHWP 545
>03_06_0394 +
33592780-33593310,33593890-33594013,33594233-33594376,
33594463-33594615,33594973-33595088,33595253-33595420,
33595514-33595744,33596229-33596378
Length = 538
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/38 (42%), Positives = 18/38 (47%)
Query: 50 ARPAPSSRLALIELGLSFDFEWGERAVLRVGKNYHRGP 87
A SS L I+ GLS F GER VG Y+ P
Sbjct: 197 ANKKDSSPLKAIDFGLSVFFRPGERFTEIVGSPYYMAP 234
>02_05_0938 +
32901143-32901215,32901841-32901982,32902243-32902314,
32902573-32902644,32902711-32902782,32902913-32902948,
32903001-32903072,32903319-32903387,32903483-32903554,
32903668-32903739,32903838-32903909,32904153-32904224,
32904470-32904541,32904623-32904694,32904782-32904853,
32904911-32905003,32905150-32905218,32905315-32905386,
32905479-32905552,32905643-32905771,32905966-32906331,
32906584-32906954,32907522-32907890
Length = 884
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 65 LSFDFEWGERAVLRVGKNYHRGPIPSVIGIIQ 96
+ F+ + + A L + N GPIPSVIG++Q
Sbjct: 191 IPFNIGFLQVATLSLQGNNFSGPIPSVIGLMQ 222
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 75 AVLRVGKNYHRGPIPSVIGIIQYT 98
AVL + N GPIPS++G + YT
Sbjct: 225 AVLDLSFNQLSGPIPSILGNLTYT 248
>02_05_0450 -
29117826-29118212,29118307-29118733,29119158-29119296,
29119426-29119530,29119624-29119705
Length = 379
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 24 ESGGGQPPIRVASYAADSDHWPAFGGARPAPSSRLALIELGLSFDFEWGERAVL 77
E G GQP + + + A + HW + A ++ I+L F W E+A++
Sbjct: 88 EQGAGQPIVLIHGFGASAFHW-RYNIPELAKKYKVYAIDL---LGFGWSEKALV 137
>12_02_0237 -
16087083-16087201,16087531-16088341,16097713-16098156
Length = 457
Score = 27.1 bits (57), Expect = 4.8
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 4/26 (15%)
Query: 37 YAADSDHWPAFGGARPAPSSRLALIE 62
+A D DHWP ARP S + AL E
Sbjct: 50 HAVDGDHWP----ARPGDSIKTALAE 71
>10_08_0330 - 16816497-16819952
Length = 1151
Score = 27.1 bits (57), Expect = 4.8
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 76 VLRVGKNYHRGPIPSVIGIIQ 96
+L +G N GPIPSV+G +Q
Sbjct: 284 ILELGDNQLGGPIPSVLGQLQ 304
>08_01_0682 +
5974622-5974745,5976182-5976371,5976953-5977024,
5977482-5977553,5977688-5977759,5977842-5977913,
5978690-5978761,5978855-5978926,5979017-5979091,
5979529-5979594,5979821-5979885,5979975-5980354,
5980438-5980636,5980713-5980763,5980955-5981073,
5981190-5981400,5981524-5981755,5981842-5981992,
5982089-5982447,5982750-5982768
Length = 890
Score = 26.6 bits (56), Expect = 6.3
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 60 LIELGLSFDFEWGERAVLRVGK-----NYHRGPIPSVIGIIQYTR----GSSNY 104
++ G+ D + R V + K NY GP+PS IG + + + GS+N+
Sbjct: 83 VVNPGIKCDCSFNNRTVCHITKLNLQQNYLTGPVPSFIGKLTFMQYLGIGSNNF 136
>01_01_0876 + 6862321-6862398,6862442-6862747
Length = 127
Score = 26.6 bits (56), Expect = 6.3
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 26 GGGQPPIRVASYAADSDH---WPAFGGARPAPSSRLALI 61
GGG PP ++ A WP GG RPA ++ ++
Sbjct: 7 GGGSPPPSLSDLAGGGRGRPIWPEEGGGRPAGATARGIL 45
>04_01_0058 +
592846-593185,594641-595182,596298-596987,597078-597233,
597277-597856,598601-598764,598907-599100,599702-599750,
599777-599806
Length = 914
Score = 26.2 bits (55), Expect = 8.3
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Query: 12 DKCRDTHSRAKPESGGGQPPIRVASYAADSDHWPAFGGARPAPSSRLALIELGLSFDFEW 71
D C D + + ++G Q + +S P FGG L L+E F +W
Sbjct: 298 DLCCDCYDKGNLDAGMSQTDFIIM----ESAEIPGFGGTSWTDQETLLLLEALEIFQAKW 353
Query: 72 GERA 75
G+ A
Sbjct: 354 GDIA 357
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.134 0.411
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,478,541
Number of Sequences: 37544
Number of extensions: 207473
Number of successful extensions: 622
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 607
Number of HSP's gapped (non-prelim): 21
length of query: 129
length of database: 14,793,348
effective HSP length: 74
effective length of query: 55
effective length of database: 12,015,092
effective search space: 660830060
effective search space used: 660830060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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