GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001199-TA|BGIBMGA001199-PA|undefined
         (129 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    23   3.3  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   4.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   4.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   4.4  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    22   5.8  
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    22   7.7  
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    22   7.7  
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    22   7.7  
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    22   7.7  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    22   7.7  

>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 84  HRGPIPSVIGIIQYTRGSSNYVVVNLRAAPSHTRRSRPA 122
           H G I S    IQ+    + + V ++ AAP+  + S PA
Sbjct: 24  HHGSIASSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPA 62


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 7   AKRKVDKCRDTHSRAKPESGGGQP 30
           +K K       HS+ +P SGG  P
Sbjct: 389 SKSKFGAALAAHSQMQPNSGGSSP 412


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 22  KPESGGGQPPIRVASYAADSDHWPAFGGARP 52
           + +S   +PP    SY   +DH     G RP
Sbjct: 397 REKSNPSRPPSVAGSYGKPNDHELDSSGGRP 427


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 5/42 (11%)

Query: 9   RKVDKCRDTHSRAKPESGG-----GQPPIRVASYAADSDHWP 45
           RK+   R    R  P SGG       PP R  S +     WP
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWP 289


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 13/38 (34%), Positives = 14/38 (36%)

Query: 17  THSRAKPESGGGQPPIRVASYAADSDHWPAFGGARPAP 54
           TH  A   +GG  P  RV       DH    G A   P
Sbjct: 174 THLIATNAAGGANPKYRVGDIMLIKDHINLMGFAGNNP 211


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 84  HRGPIPSVIGIIQYTRGSSNYVVVNLRAAPSHTRRSRPA 122
           H G I +    IQ+    + + V ++ AAP+  + S PA
Sbjct: 24  HHGSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPA 62


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 84  HRGPIPSVIGIIQYTRGSSNYVVVNLRAAPSHTRRSRPA 122
           H G I +    IQ+    + + V ++ AAP+  + S PA
Sbjct: 24  HHGSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPA 62


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 84  HRGPIPSVIGIIQYTRGSSNYVVVNLRAAPSHTRRSRPA 122
           H G I +    IQ+    + + V ++ AAP+  + S PA
Sbjct: 24  HHGSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPA 62


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 84  HRGPIPSVIGIIQYTRGSSNYVVVNLRAAPSHTRRSRPA 122
           H G I +    IQ+    + + V ++ AAP+  + S PA
Sbjct: 24  HHGSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPA 62


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 84  HRGPIPSVIGIIQYTRGSSNYVVVNLRAAPSHTRRSRPA 122
           H G I +    IQ+    + + V ++ AAP+  + S PA
Sbjct: 24  HHGSIATSHSTIQHHAAPAIHHVGSVHAAPAIYQHSAPA 62


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,772
Number of Sequences: 2123
Number of extensions: 5597
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 10
length of query: 129
length of database: 516,269
effective HSP length: 57
effective length of query: 72
effective length of database: 395,258
effective search space: 28458576
effective search space used: 28458576
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)