GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001198-TA|BGIBMGA001198-PA|IPR006671|Cyclin, N-terminal,
IPR004367|Cyclin, C-terminal, IPR006670|Cyclin, IPR011028|Cyclin-like
         (286 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    27   0.81 
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   4.3  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   5.7  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    23   10.0 

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 247 LARETQPQEPRTRVSQAHKQTTPEHTELPDTPTDVQDVRF 286
           L  + Q Q+ + ++ Q H  +   H  LP TPT+   V F
Sbjct: 55  LGLQQQQQQQQQQLLQQHPPSVFPHAALPHTPTNQPIVPF 94


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 14/65 (21%), Positives = 26/65 (40%)

Query: 95  AISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQL 154
           A+  Q        T+ L      CHPL    LC Y    +Y   +  + I+      W++
Sbjct: 170 AMIAQTASAYLTLTVTLERYVAVCHPLRARALCTYGRARLYVVGILVFSILYNLPRFWEV 229

Query: 155 SVATA 159
           ++ ++
Sbjct: 230 TLISS 234


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 5/54 (9%)

Query: 229 TRTPAAAAE-----LVARHVERVLARETQPQEPRTRVSQAHKQTTPEHTELPDT 277
           TRTPA + E            R+ AR + P +P T  SQ       +  E P++
Sbjct: 307 TRTPATSTEHRYTTRTPTTTHRLAARTSTPPDPETTSSQQCHPPVNDTLEAPNS 360


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)

Query: 221 SVNELCALTRTPAAAAELVARHVERVLARETQP 253
           +V    A + +PAA A LV  H E  LA    P
Sbjct: 14  AVTVATATSTSPAAMASLVLDHTELPLAGTIPP 46


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.133    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 265,703
Number of Sequences: 2123
Number of extensions: 8762
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 4
length of query: 286
length of database: 516,269
effective HSP length: 63
effective length of query: 223
effective length of database: 382,520
effective search space: 85301960
effective search space used: 85301960
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 47 (23.0 bits)