Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001198-TA|BGIBMGA001198-PA|IPR006671|Cyclin, N-terminal,
IPR004367|Cyclin, C-terminal, IPR006670|Cyclin, IPR011028|Cyclin-like
(286 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25380.1 68418.m03010 cyclin 3a (CYC3a) nearly identical to c... 91 1e-18
At5g43080.1 68418.m05259 cyclin, putative similar to A-type cycl... 89 2e-18
At5g11300.1 68418.m01319 cyclin, putative (CYC3b) similar to cyc... 87 2e-17
At1g47230.1 68414.m05228 cyclin, putative similar to cyclin A-li... 87 2e-17
At1g77390.1 68414.m09012 cyclin, putative similar to mitotic cyc... 86 2e-17
At1g47210.2 68414.m05226 cyclin family protein similar to A-type... 85 5e-17
At1g80370.1 68414.m09408 cyclin, putative similar to cyclin A2 [... 84 1e-16
At1g15570.1 68414.m01872 cyclin, putative similar to cyclin A2 [... 83 2e-16
At1g47230.2 68414.m05229 cyclin, putative similar to cyclin A-li... 82 4e-16
At1g44110.1 68414.m05095 cyclin, putative similar to mitotic cyc... 81 6e-16
At4g37490.1 68417.m05305 G2/mitotic-specific cyclin (CYC1) / B-l... 78 8e-15
At4g35620.1 68417.m05059 cyclin 2b (CYC2b) identical to cyclin 2... 76 2e-14
At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyc... 76 2e-14
At5g06150.1 68418.m00684 cyclin 1b (CYC1b) identical to cyclin [... 73 2e-13
At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cycl... 73 2e-13
At1g20610.1 68414.m02575 cyclin, putative similar to G2/mitotic-... 72 4e-13
At1g47220.1 68414.m05227 cyclin, putative similar to cyclin A-li... 70 2e-12
At1g76310.1 68414.m08864 cyclin, putative similar to B-like cycl... 70 2e-12
At1g16330.1 68414.m01954 cyclin family protein similar to SP|P25... 68 6e-12
At1g70210.1 68414.m08079 cyclin delta-1 (CYCD1) nearly identical... 64 8e-11
At2g26760.1 68415.m03209 cyclin, putative similar to CYCB1-1 pro... 61 1e-09
At2g22490.1 68415.m02668 cyclin delta-2 (CYCD2) identical to SP|... 60 1e-09
At1g47210.1 68414.m05225 cyclin family protein similar to A-type... 60 2e-09
At5g65420.1 68418.m08227 cyclin, putative similar to cyclin D2.1... 57 1e-08
At4g34160.1 68417.m04847 cyclin delta-3 (CYCD3) identical to SP|... 57 2e-08
At1g20590.1 68414.m02571 cyclin, putative similar to SP|Q40671 G... 55 5e-08
At5g67260.1 68418.m08478 cyclin family protein similar to cyclin... 51 8e-07
At5g02110.1 68418.m00132 cyclin family protein low similarity to... 50 2e-06
At4g37630.1 68417.m05323 cyclin family protein similar to SP|P42... 49 4e-06
At3g50070.1 68416.m05474 cyclin family protein similar to cyclin... 47 1e-05
At1g14750.1 68414.m01763 cyclin, putative (SDS) identical to cyc... 47 1e-05
At5g10440.1 68418.m01210 cyclin family protein similar to cyclin... 47 2e-05
At4g03270.1 68417.m00446 cyclin family protein similar to CycD3;... 42 5e-04
At5g48630.1 68418.m06014 cyclin family protein similar to SP|P55... 35 0.055
At5g48640.1 68418.m06015 cyclin family protein similar to SP|P55... 34 0.095
At1g34460.1 68414.m04281 cyclin, putative strong similarity to c... 33 0.17
At5g38190.1 68418.m04602 myosin heavy chain-related 29 3.6
At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar ... 29 3.6
At1g32010.1 68414.m03938 myosin heavy chain-related 29 3.6
>At5g25380.1 68418.m03010 cyclin 3a (CYC3a) nearly identical to
cyclin 3a [Arabidopsis thaliana] GI:509425; contains
Pfam profiles PF00134: Cyclin, N-terminal domain,
PF02984: Cyclin, C-terminal domain
Length = 437
Score = 90.6 bits (215), Expect = 1e-18
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 31 LNLLALERSHALHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRF 90
+N+ LE+ + T Y VQ DI P MR ++ W++ L V+ +DRF
Sbjct: 181 INVAELEQRPS--TSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVSDTLYLTVNLIDRF 238
Query: 91 LAQRAISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRL 150
++ I +Q+LQLL +T ML+ASK+ + ++ C TDN+ EV EI +L L
Sbjct: 239 MSHNYIEKQKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRLEVLSMEIKVLNSL 298
Query: 151 NWQLSVATAFDFVEPFLARVPWGRSNSLIRTHALT--LTSVCYTETEFLLVPPSMVAVAC 208
+++LSV T F+ F+ LI L + TE FL PS++A +
Sbjct: 299 HFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYTFLRFLPSLIAASA 358
Query: 209 ITAA 212
+ A
Sbjct: 359 VFLA 362
>At5g43080.1 68418.m05259 cyclin, putative similar to A-type cyclins
from [Nicotiana tabacum] GI:1064931, [Catharanthus
roseus] GI:2190259; contains Pfam profiles PF00134:
Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal
domain
Length = 355
Score = 89.4 bits (212), Expect = 2e-18
Identities = 55/173 (31%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLL 104
DY + +Q D+ MR V+ W++ LAVSY+DRFL+ + +++Q+LQLL
Sbjct: 107 DYIEKIQKDVTSNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLL 166
Query: 105 AVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVE 164
VT+ML+ASK+ + P +VD C TDN+ E+ + E +L L ++L T+ F+
Sbjct: 167 GVTSMLIASKYEEITPPNVDDFCYITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLR 226
Query: 165 PF--LARVPWGRSN---SLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
F +A+ + S+ + ++ L+ + Y +FL PS VA + + A
Sbjct: 227 RFTRVAQEDFEMSHLQMEFLCSYLSELSMLDYQSVKFL---PSTVAASAVFLA 276
>At5g11300.1 68418.m01319 cyclin, putative (CYC3b) similar to cyclin
3a [Arabidopsis thaliana] GI:509425; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain; identical to cDNA cyc3b mRNA
for cyclin 3b protein GI:728520
Length = 436
Score = 86.6 bits (205), Expect = 2e-17
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLL 104
+Y + VQ DI P MRK++ W++ L V+ +DRFL+ I RQ+LQLL
Sbjct: 192 NYMELVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLL 251
Query: 105 AVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVE 164
V+ ML+ASK+ + V+ C T N+ EV EI +L ++++LSV T F+
Sbjct: 252 GVSCMLIASKYEELSAPGVEEFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLR 311
Query: 165 PFLARVPWGRSNSLIRTHALT--LTSVCYTETEFLLVPPSMVAVACITAA 212
F+ I L L + E FL PS++A + + A
Sbjct: 312 RFIKAAQASYKVPFIELEYLANYLAELTLVEYSFLRFLPSLIAASAVFLA 361
>At1g47230.1 68414.m05228 cyclin, putative similar to cyclin A-like
protein [Nicotiana tabacum] GI:1064931, A-type cyclin
[Catharanthus roseus] GI:2190259; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 369
Score = 86.6 bits (205), Expect = 2e-17
Identities = 44/122 (36%), Positives = 66/122 (54%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLL 104
DY + VQ D+ P MR V+ W++ L +SY+DRFL+ + I+RQ+LQL+
Sbjct: 117 DYIEKVQSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLV 176
Query: 105 AVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVE 164
V+ ML+ASK+ + P V+ C TDN+ EV E +L L ++L T F+
Sbjct: 177 GVSAMLIASKYEEIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLR 236
Query: 165 PF 166
F
Sbjct: 237 RF 238
>At1g77390.1 68414.m09012 cyclin, putative similar to mitotic cyclin
a2-type [Glycine max] GI:857397; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 442
Score = 86.2 bits (204), Expect = 2e-17
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLL 104
DY + Q I MR ++ W++ LAV+Y+DR+L AI++Q LQLL
Sbjct: 198 DYMERTQSSINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQNLQLL 257
Query: 105 AVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVE 164
VT M++A+K+ + V+ C TDN+ +E+ + E +L L ++L+ TA F+
Sbjct: 258 GVTCMMIAAKYEEVCVPQVEDFCYITDNTYLRNELLEMESSVLNYLKFELTTPTAKCFLR 317
Query: 165 PFLARVPWGRS---NSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
FL R GR + L A LT + + L PS+VA + + A
Sbjct: 318 RFL-RAAQGRKEVPSLLSECLACYLTELSLLDYAMLRYAPSLVAASAVFLA 367
>At1g47210.2 68414.m05226 cyclin family protein similar to A-type
cyclin [Catharanthus roseus] GI:2190259; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 372
Score = 85.0 bits (201), Expect = 5e-17
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 1 MENSGNINERAGDLCVAGSDRALDRDPRVLLNLLALERSHALHTDYFQNVQIDIQPFMRK 60
+E+ +I+ R+ D + G A D L L ++ DY + VQ D+ P MR
Sbjct: 83 LESKSDIDSRSDDPQMCGPYVA---DIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRG 139
Query: 61 VVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLLAVTTMLLASKFRQCHP 120
V+ W++ L VS++DRFL+ + +++Q+LQL+ V+ ML+ASK+ + P
Sbjct: 140 VLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISP 199
Query: 121 LSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVEPF 166
VD C TDN+ +V + E +L L ++L T F+ F
Sbjct: 200 PKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRF 245
>At1g80370.1 68414.m09408 cyclin, putative similar to cyclin A2
[Lycopersicon esculentum] GI:5420276; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 461
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 27 PRVLLNLLALERSHALHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSY 86
P + NL E D+ + Q D+ MR ++ W++ L V
Sbjct: 199 PDIYYNLRVAELKRRPFPDFMEKTQRDVTETMRGILVDWLVEVSEEYTLVPDTLYLTVYL 258
Query: 87 MDRFLAQRAISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIML 146
+D FL + RQ+LQLL +T ML+ASK+ + H ++ C TDN+ +V + E +
Sbjct: 259 IDWFLHGNYVERQRLQLLGITCMLIASKYEEIHAPRIEEFCFITDNTYTRDQVLEMESQV 318
Query: 147 LQRLNWQLSVATAFDFVEPFL--ARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMV 204
L+ ++Q+ T+ F+ FL A+V + + + A LT + + FL PS++
Sbjct: 319 LKHFSFQIYTPTSKTFLRRFLRAAQVSFPNQSLEMEFLANYLTELTLMDYPFLKFLPSII 378
Query: 205 AVACITAA 212
A + + A
Sbjct: 379 AASAVFLA 386
>At1g15570.1 68414.m01872 cyclin, putative similar to cyclin A2
[Lycopersicon esculentum] GI:5420276, cyclin [Medicago
sativa] GI:1050559; contains Pfam profiles PF00134:
Cyclin, N-terminal domain, PF02984: Cyclin, C-terminal
domain
Length = 450
Score = 83.0 bits (196), Expect = 2e-16
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 2/188 (1%)
Query: 27 PRVLLNLLALERSHALHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSY 86
P + NL E D+ + +Q D+ MR ++ W++ L V
Sbjct: 190 PEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEVSEEYTLASDTLYLTVYL 249
Query: 87 MDRFLAQRAISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIML 146
+D FL + RQQLQLL +T ML+ASK+ + ++ C TDN+ +V + E +
Sbjct: 250 IDWFLHGNYVQRQQLQLLGITCMLIASKYEEISAPRIEEFCFITDNTYTRDQVLEMENQV 309
Query: 147 LQRLNWQLSVATAFDFVEPFLARVPWGRSNSLIRTHALT--LTSVCYTETEFLLVPPSMV 204
L+ ++Q+ T F+ FL R + + L LT + + FL PS+V
Sbjct: 310 LKHFSFQIYTPTPKTFLRRFLRAAQASRLSPSLEVEFLASYLTELTLIDYHFLKFLPSVV 369
Query: 205 AVACITAA 212
A + + A
Sbjct: 370 AASAVFLA 377
>At1g47230.2 68414.m05229 cyclin, putative similar to cyclin A-like
protein [Nicotiana tabacum] GI:1064931, A-type cyclin
[Catharanthus roseus] GI:2190259; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 370
Score = 82.2 bits (194), Expect = 4e-16
Identities = 44/123 (35%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLL 104
DY + VQ D+ P MR V+ W++ L +SY+DRFL+ + I+RQ+LQL+
Sbjct: 117 DYIEKVQSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLV 176
Query: 105 AVTTMLLAS-KFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFV 163
V+ ML+AS K+ + P V+ C TDN+ EV E +L L ++L T F+
Sbjct: 177 GVSAMLIASRKYEEIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFL 236
Query: 164 EPF 166
F
Sbjct: 237 RRF 239
>At1g44110.1 68414.m05095 cyclin, putative similar to mitotic cyclin
a2-type [Glycine max] GI:857397, cyclin A-like protein
[Nicotiana tabacum] GI:1064927; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 460
Score = 81.4 bits (192), Expect = 6e-16
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 32 NLLALERSHALHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFL 91
+L A E DY + VQ D+ MR ++ W++ L V+Y+DR+L
Sbjct: 201 HLRASEAKKRPDVDYMERVQKDVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYL 260
Query: 92 AQRAISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLN 151
+ ISRQ+LQLL V M++A+K+ + V+ C TDN+ EV E +L L
Sbjct: 261 SGNVISRQKLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYLKDEVLDMESDVLNYLK 320
Query: 152 WQLSVATAFDFVEPFLARVPWGRSNSLIRTHALT--LTSVCYTETEFLLVPPSMVAVACI 209
++++ T F+ F+ L++ + + + E L PS+VA + I
Sbjct: 321 FEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMANYIAELSLLEYTMLSHSPSLVAASAI 380
Query: 210 TAA 212
A
Sbjct: 381 FLA 383
>At4g37490.1 68417.m05305 G2/mitotic-specific cyclin (CYC1) / B-like
cyclin (CYC1) identical to SP|P30183 G2/mitotic-specific
cyclin (B-like cyclin) {Arabidopsis thaliana}
Length = 428
Score = 77.8 bits (183), Expect = 8e-15
Identities = 49/174 (28%), Positives = 90/174 (51%), Gaps = 5/174 (2%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLL 104
DY + Q DI MR ++ W++ F L V+ +DRFL+ + + R++LQL+
Sbjct: 184 DYMAS-QPDINEKMRLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKELQLV 242
Query: 105 AVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVE 164
++ +L+++K+ + P V+ L D++ ++ E +L L W L+V T + F+
Sbjct: 243 GLSALLMSAKYEEIWPPQVEDLVDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLA 302
Query: 165 PFL-ARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAAARGLR 217
F+ A + + +++ H L V + +T ++ PSMVA + I AA LR
Sbjct: 303 RFIKASIADEKMENMV--HYLAELGVMHYDT-MIMFSPSMVAASAIYAARSSLR 353
>At4g35620.1 68417.m05059 cyclin 2b (CYC2b) identical to cyclin 2b
protein [Arabidopsis thaliana] GI:509423
Length = 429
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/176 (26%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 37 ERSHALHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAI 96
ER + DY Q DI MR ++ W++ L V+ +DRFL+++A+
Sbjct: 184 ERFSCVPLDYMAQ-QFDISDKMRAILIDWLIEVHDKFELMNETLFLTVNLIDRFLSKQAV 242
Query: 97 SRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSV 156
+R++LQL+ + +LLA K+ + V+ L +D + +V + E ++L L + +S+
Sbjct: 243 ARKKLQLVGLVALLLACKYEEVSVPIVEDLVVISDKAYTRTDVLEMEKIMLSTLQFNMSL 302
Query: 157 ATAFDFVEPFLARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
T + F++ FL + ++ + + L V Y E + PPS++A + A
Sbjct: 303 PTQYPFLKRFLKAAQSDKKLEILASFLIELALVDY---EMVRYPPSLLAATAVYTA 355
>At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyclin
2b protein [Arabidopsis thaliana] GI:509423; contains
Pfam profiles PF00134: Cyclin, N-terminal domain,
PF02984: Cyclin, C-terminal domain; identical to cDNA
cyc2a mRNA for cyclin 2a protein GI:728518
Length = 429
Score = 76.2 bits (179), Expect = 2e-14
Identities = 49/191 (25%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 36 LERSHALHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRA 95
+ER + DY QID+ MR ++ W++ L V+ +DRFL+++
Sbjct: 182 MERFSCVPVDYMMQ-QIDLNEKMRAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQN 240
Query: 96 ISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLS 155
+ R++LQL+ + +LLA K+ + V+ L +D + ++V + E +L L + +S
Sbjct: 241 VMRKKLQLVGLVALLLACKYEEVSVPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFNIS 300
Query: 156 VATAFDFVEPFLARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAAARG 215
+ T + F++ FL + ++ + + L V E E L PPS++A + A
Sbjct: 301 LPTQYPFLKRFLKAAQADKKCEVLASFLIELALV---EYEMLRFPPSLLAATSVYTAQCT 357
Query: 216 LRVRMSVNELC 226
L N C
Sbjct: 358 LDGSRKWNSTC 368
>At5g06150.1 68418.m00684 cyclin 1b (CYC1b) identical to cyclin
[Arabidopsis thaliana] GI:1360646
Length = 445
Score = 73.3 bits (172), Expect = 2e-13
Identities = 43/166 (25%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 47 FQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLLAV 106
+ ++Q ++ MR ++ W+L L V+ +DRFL+ +A+ +++LQL+ +
Sbjct: 202 YMHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGI 261
Query: 107 TTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVEPF 166
+ +L+ASK+ + P V+ L TDN+ ++ E +L L W L+V T + F+ F
Sbjct: 262 SALLIASKYEEIWPPQVNDLVYVTDNAYSSRQILVMEKAILGNLEWYLTVPTQYVFLVRF 321
Query: 167 LARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
+ + H L + + +T L PSM+A + + A
Sbjct: 322 I-KASMSDPEMENMVHFLAELGMMHYDT--LTFCPSMLAASAVYTA 364
>At3g11520.1 68416.m01404 cyclin, putative (CYC2) similar to cyclin
[Arabidopsis thaliana] GI:1360646; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain; identical to cDNA cyclin box
(cyc2) partial cds GI:456019
Length = 414
Score = 73.3 bits (172), Expect = 2e-13
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 47 FQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLLAV 106
+ + Q +I MR ++ W++ L V+ +DRFL+ + + R++LQL+ V
Sbjct: 179 YMHTQPEIDEKMRSILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRELQLVGV 238
Query: 107 TTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVEPF 166
+ +L+ASK+ + P V+ L TDNS ++ E +L L W L+V T + F+ F
Sbjct: 239 SALLIASKYEEIWPPQVNDLVYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRF 298
Query: 167 LARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
+ S+ + L + + L+ PSM+A + + A
Sbjct: 299 IKA---SGSDQKLENLVHFLAELGLMHHDSLMFCPSMLAASAVYTA 341
>At1g20610.1 68414.m02575 cyclin, putative similar to
G2/mitotic-specific cyclins (B-like cyclin) from
{Medicago varia} SP|P46278, SP|P46277; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 429
Score = 72.1 bits (169), Expect = 4e-13
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 37 ERSHALHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAI 96
E+ + +Y N Q D+ MR ++ W++ L ++ +DRFLA I
Sbjct: 189 EKLSCVPPNYMDNQQ-DLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQI 247
Query: 97 SRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSV 156
R++LQL+ VT +LLA K+ + VD L +D + EV E ++ L + S+
Sbjct: 248 VRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSL 307
Query: 157 ATAFDFVEPFLARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
T + F++ FL +S+ + + + +C E E L PS +A + I A
Sbjct: 308 PTPYVFMKRFLKA---AQSDKKLEILSFFMIELCLVEYEMLEYLPSKLAASAIYTA 360
>At1g47220.1 68414.m05227 cyclin, putative similar to cyclin A-like
protein [Nicotiana tabacum] GI:1064931, A-type cyclin
[Catharanthus roseus] GI:2190259; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 327
Score = 70.1 bits (164), Expect = 2e-12
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 3/173 (1%)
Query: 42 LHTDYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQL 101
LH DY + +Q DI P R V+ W++ L VSY+DRFL+ + ++ L
Sbjct: 76 LH-DYIEKIQEDITPSKRGVLVDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWL 134
Query: 102 QLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFD 161
QL+ V+ M +ASK+ + V+ C T N+ +V + E +L L ++L T
Sbjct: 135 QLVGVSAMFIASKYEEKRRPKVEDFCYITANTYTKQDVLKMEEDILLALEFELGRPTTNT 194
Query: 162 FVEPFL--ARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
F+ F+ A+ + N + L+ + + + PS++A + + A
Sbjct: 195 FLRRFIRVAQEDFKVPNLQLEPLCCYLSELSMLDYSCVKFVPSLLAASAVFLA 247
>At1g76310.1 68414.m08864 cyclin, putative similar to B-like cyclin
GI:780267 from (Medicago sativa); contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 431
Score = 69.7 bits (163), Expect = 2e-12
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 5/174 (2%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLA-QRAISRQQLQL 103
+Y +N Q DI MR ++ W++ L ++ +DRFLA + I+R++LQL
Sbjct: 197 NYMEN-QHDINERMRGILFDWLIEVHYKFELMEETLYLTINLIDRFLAVHQHIARKKLQL 255
Query: 104 LAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFV 163
+ VT MLLA K+ + VD L +D + E+ E ++ L + + T + F+
Sbjct: 256 VGVTAMLLACKYEEVSVPVVDDLILISDKAYTRTEILDMEKLMANTLQFNFCLPTPYVFM 315
Query: 164 EPFLARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAAARGLR 217
FL +S+ + + + +C E E L PS +A + I A L+
Sbjct: 316 RRFLKA---AQSDKKLELLSFFMIELCLVEYEMLQYTPSQLAASAIYTAQSTLK 366
>At1g16330.1 68414.m01954 cyclin family protein similar to SP|P25011
G2/mitotic-specific cyclin S13-6 (B-like cyclin)
{Glycine max}; contains Pfam profiles PF00134: Cyclin,
N-terminal domain, PF02984: Cyclin, C-terminal domain
Length = 396
Score = 68.1 bits (159), Expect = 6e-12
Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 46 YFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLLA 105
++ + ++ P R ++ W++ L + +DR+L+Q I + ++QL+
Sbjct: 163 HYLSAHAEVSPVTRGILINWLIEVHFKFDLMHETLYLTMDLLDRYLSQVPIHKNEMQLIG 222
Query: 106 VTTMLLASKFRQ-CHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVE 164
+T +LLASK+ HP DL+ + + S ++ E +L++L ++L+ T + F+
Sbjct: 223 LTALLLASKYEDYWHPRIKDLI-SISAESYTREQILGMERSMLKQLKFRLNAPTPYVFML 281
Query: 165 PFLARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAA 212
FL +SN + A L +C E E L PS++ + I A
Sbjct: 282 RFLKA---AQSNKKLEQLAFYLIELCLVEYEALKYKPSLLCASAIYVA 326
>At1g70210.1 68414.m08079 cyclin delta-1 (CYCD1) nearly identical to
SP|P42751 Cyclin delta-1 {Arabidopsis thaliana}
Length = 339
Score = 64.5 bits (150), Expect = 8e-11
Identities = 56/192 (29%), Positives = 79/192 (41%), Gaps = 6/192 (3%)
Query: 37 ERSHALHTDYFQNVQI-DIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRA 95
ER DY Q + R+ W+L LAV+YMDRFL R
Sbjct: 59 ERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARR 118
Query: 96 I---SRQQLQLLAVTTMLLASKFRQCH-PLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLN 151
+ S +QLLAV + LA+K + P D A +++ E+++L L+
Sbjct: 119 LPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLD 178
Query: 152 WQLSVATAFDFVEPFLARV-PWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACIT 210
W+L T FDF+ F ++ P G +HA + E FL PS +A A I
Sbjct: 179 WRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAIL 238
Query: 211 AAARGLRVRMSV 222
A L SV
Sbjct: 239 CVANELPSLSSV 250
>At2g26760.1 68415.m03209 cyclin, putative similar to CYCB1-1
protein [Petunia x hybrida] GI:6093215, B-type cyclin
[Nicotiana tabacum] GI:849074; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 387
Score = 60.9 bits (141), Expect = 1e-09
Identities = 44/174 (25%), Positives = 83/174 (47%), Gaps = 4/174 (2%)
Query: 45 DYFQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLL 104
DY + Q +I MR ++ W++ L ++ +DRFL+ + R++LQLL
Sbjct: 149 DYIGS-QPEINEKMRSILIDWLVDVHRKFELMPETLYLTINLVDRFLSLTMVHRRELQLL 207
Query: 105 AVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVE 164
+ ML+A K+ + V+ +DN+ +V E +L ++ W ++V T + F+
Sbjct: 208 GLGAMLIACKYEEIWAPEVNDFVCISDNAYNRKQVLAMEKSILGQVEWYITVPTPYVFLA 267
Query: 165 PFL-ARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACITAAARGLR 217
++ A VP + + L + Y +L PSM+A + + AA + L+
Sbjct: 268 RYVKAAVPCDAEMEKLVFYLAELGLMQYPIV--VLNRPSMLAASAVYAARQILK 319
>At2g22490.1 68415.m02668 cyclin delta-2 (CYCD2) identical to
SP|P42752 Cyclin delta-2 {Arabidopsis thaliana}
Length = 361
Score = 60.5 bits (140), Expect = 1e-09
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 9/208 (4%)
Query: 12 GDLCVAGSDRALDRDPRVLLNLLALERSHALHTDYFQNVQI-DIQPFMRKVVTTWMLXXX 70
G + + GS + + R+ +L E TDY + + D+ +R W+L
Sbjct: 50 GSIPMMGSSSSSLSEDRIK-EMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVC 108
Query: 71 XXXXXXXXXFPLAVSYMDRFLAQRAISRQQ---LQLLAVTTMLLASKFRQCH-PLSVDLL 126
L+++Y+DRFL + + + QLLAV+ + LASK + P VDL
Sbjct: 109 AHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQ 168
Query: 127 CAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVEPFLARVPWGRSNSLI-RTHALT 185
+++ E++++ LNW+L T F F++ F+ ++ S +LI R+
Sbjct: 169 VEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKISGHVSENLIYRSSRFI 228
Query: 186 LTSVCYTETEFLLVPPSMVAVACITAAA 213
L + EFL PS +A A + +
Sbjct: 229 LNTT--KAIEFLDFRPSEIAAAAAVSVS 254
>At1g47210.1 68414.m05225 cyclin family protein similar to A-type
cyclin [Catharanthus roseus] GI:2190259; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 192
Score = 59.7 bits (138), Expect = 2e-09
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 1 MENSGNINERAGDLCVAGSDRALDRDPRVLLNLLALERSHALHTDYFQNVQIDIQPFMRK 60
+E+ +I+ R+ D + G A D L L ++ DY + VQ D+ P MR
Sbjct: 83 LESKSDIDSRSDDPQMCGPYVA---DIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRG 139
Query: 61 VVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQLLAVTTMLLAS 113
V+ W++ L VS++DRFL+ + +++Q+LQL+ V+ ML+AS
Sbjct: 140 VLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192
>At5g65420.1 68418.m08227 cyclin, putative similar to cyclin D2.1
protein [Nicotiana tabacum] GI:4160298; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 308
Score = 57.2 bits (132), Expect = 1e-08
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 29 VLLNLLALERSHALHTDYFQNVQ---IDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVS 85
+++ ++ E+ H DY + ++ +D+ R + W+ F LA++
Sbjct: 46 IIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALN-WIWKACEVHQFGPLCFCLAMN 104
Query: 86 YMDRFLAQRAISRQQ---LQLLAVTTMLLASKFRQCH-PLSVDLLCAYTDNSVYPHEVRQ 141
Y+DRFL+ + + LQLLAV + LA+K + P+ +DL V++
Sbjct: 105 YLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQR 164
Query: 142 WEIMLLQRLNWQLSVATAFDFVEPFL---ARVPWGRSNSLIRTHALTLTSVCYTETEFLL 198
E+++L +L W+L T ++ FL ++ SN+LI + +L + + +FL
Sbjct: 165 MELLVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLI-SRSLQVIASTTKGIDFLE 223
Query: 199 VPPSMVAVA 207
PS VA A
Sbjct: 224 FRPSEVAAA 232
>At4g34160.1 68417.m04847 cyclin delta-3 (CYCD3) identical to
SP|P42753 Cyclin delta-3 {Arabidopsis thaliana}
Length = 376
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 59 RKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQ---LQLLAVTTMLLASKF 115
RK W+L LA++Y+D+F+ ++ R + LQL++V + LA+K
Sbjct: 87 RKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKV 146
Query: 116 RQCH-PLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVEPFLARVPWGR 174
+ PL +D T +++ E+++L L W++ + T FV+ + R+
Sbjct: 147 EETQVPLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKN 206
Query: 175 S---NSLIRTHALTLTSVCYTETEFLLVPPSMVAVA 207
+ + L + H L L+ + +++ F+ PS+VA A
Sbjct: 207 NAHWDFLNKCHRLLLSVI--SDSRFVGYLPSVVAAA 240
>At1g20590.1 68414.m02571 cyclin, putative similar to SP|Q40671
G2/mitotic-specific cyclin 2 (B-like cyclin) (CYCOS2)
{Oryza sativa}; contains Pfam profiles PF00134: Cyclin,
N-terminal domain, PF02984: Cyclin, C-terminal domain
Length = 199
Score = 55.2 bits (127), Expect = 5e-08
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 90 FLAQRAISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQR 149
FLA I R++LQL+ VT +LLA K+ + VD L +D + EV E ++
Sbjct: 3 FLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANT 62
Query: 150 LNWQLSVATAFDFVEPFLARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVACI 209
L + S+ T + F++ FL +S+ + + + +C E E L PS +A + I
Sbjct: 63 LQFNFSLPTPYVFMKRFLKA---AQSDKKLEILSFFMIELCLVEYEMLEYLPSKLAASAI 119
Query: 210 TAA 212
A
Sbjct: 120 YTA 122
>At5g67260.1 68418.m08478 cyclin family protein similar to cyclin
D3.1 protein [Nicotiana tabacum] GI:4160300; contains
Pfam profiles PF00134: Cyclin, N-terminal domain,
PF02984: Cyclin, C-terminal domain
Length = 367
Score = 51.2 bits (117), Expect = 8e-07
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 7/155 (4%)
Query: 59 RKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQ---LQLLAVTTMLLASKF 115
RK W+L LAV+Y DRF+ + + QL+AV ++ LA+K
Sbjct: 96 RKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKV 155
Query: 116 RQCH-PLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVEPFLARV--PW 172
+ PL +DL +++ E+++L L W++ T F + + R W
Sbjct: 156 EEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHPVTPISFFDHIIRRFGSKW 215
Query: 173 GRSNSLIRTHALTLTSVCYTETEFLLVPPSMVAVA 207
+ R L SV +T F+ PS++A A
Sbjct: 216 HQQLDFCRKCERLLISV-IADTRFMRYFPSVLATA 249
>At5g02110.1 68418.m00132 cyclin family protein low similarity to
cyclin D3.1 from [Lycopersicon esculentum] GI:5679622,
[Nicotiana tabacum] GI:4160300; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 341
Score = 50.0 bits (114), Expect = 2e-06
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 83 AVSYMDRFLAQRAI---SRQQLQLLAVTTMLLASKFRQ-CHPLSVDLLCAYTDNSVYPHE 138
A + DRF+ + ++L+AVT++ +ASKF + PL +L + + +
Sbjct: 102 AANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNT 161
Query: 139 VRQWEIMLLQRLNWQLSVATAFDFVEPFLARVPWGRSNSLIRTHALTLTSVCYTETEFLL 198
V Q E+++L+ L W+++ T++ F + ++++ + ++ L V + + L
Sbjct: 162 VAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHMIMNRITNHLLDV-ICDLKMLQ 220
Query: 199 VPPSMVAVACITAAARGLRVRMSVNELCALTRTPAAAAELVARHVERVLARETQPQEPRT 258
PPS+VA A I R S+ L E + + V+ + R+ Q R
Sbjct: 221 YPPSVVATAAIWILMEDKVCRESIMNLFEQNH-----KEKIVKCVDGMKNRDIDHQSSRR 275
Query: 259 RVSQ 262
R S+
Sbjct: 276 RYSE 279
>At4g37630.1 68417.m05323 cyclin family protein similar to SP|P42753
Cyclin delta-3 {Arabidopsis thaliana}; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 323
Score = 48.8 bits (111), Expect = 4e-06
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 59 RKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQ-----LQLLAVTTMLLAS 113
R + W+L +A+SY D FL +R I Q+ ++LL+V + LA+
Sbjct: 72 RLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRLLSVACLSLAA 131
Query: 114 KFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDFVEPFLARV 170
K + + D P +R+ E+++L L+W++++ T F + FLA++
Sbjct: 132 KMEERIVPGLSQYPQDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFNYFLAKI 188
>At3g50070.1 68416.m05474 cyclin family protein similar to cyclin
D3.1 protein [Nicotiana tabacum] GI:4160300, CycD3;2
[Lycopersicon esculentum] GI:6434199; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 361
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 82 LAVSYMDRFLAQRAISRQQ---LQLLAVTTMLLASKFRQCH-PLSVDLLCAYTDNSVYPH 137
LAV+Y DRF+ R + QL A+ + LA+K + P +D
Sbjct: 109 LAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAK 168
Query: 138 EVRQWEIMLLQRLNWQLSVATAFDFVEPFLARVPWGRSNS---LIRTHALTLTSVCYTET 194
+++ E+++L L+W++ T F + + R + + L R +L L+ + ++
Sbjct: 169 TIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSII--PDS 226
Query: 195 EFLLVPPSMVAVACITAAARGLRV 218
FL PS++A A + + R L++
Sbjct: 227 RFLSFSPSVLATAIMVSVIRDLKM 250
>At1g14750.1 68414.m01763 cyclin, putative (SDS) identical to
cyclin-like protein [Arabidopsis thaliana] GI:20302467;
low similarity to SP|P30278 G2/mitotic-specific cyclin 2
(B-like cyclin) (CycMs2 {Medicago sativa}; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 578
Score = 47.2 bits (107), Expect = 1e-05
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 31 LNLLALERSHALHTD----YFQNVQ-IDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVS 85
L L ERSHA D Y + + P +R ++ W++ L V
Sbjct: 354 LRLRERERSHAYMRDCAKAYCSRMDNTGLIPRLRSIMVQWIVKQCSDMGLQQETLFLGVG 413
Query: 86 YMDRFLAQRAI-SRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYT-DNSVYP-HEVRQW 142
+DRFL++ + S + L L+ + ++ LA++ + P + +T N Y HEV
Sbjct: 414 LLDRFLSKGSFKSERTLILVGIASLTLATRIEENQPYNSIRKRNFTIQNLRYSRHEVVAM 473
Query: 143 EIMLLQRLNWQLSVATAFDFVEPFLARVPWGRSNSLIRTHALTLTSVCYTETEFLLVPPS 202
E ++ + LN++ T F+F+ +L R+N + A +L ++ L PS
Sbjct: 474 EWLVQEVLNFKCFTPTIFNFLWFYLKA---ARANPEVERKAKSLAVTSLSDQTQLCFWPS 530
Query: 203 MVAVACITAA 212
VA A + A
Sbjct: 531 TVAAALVVLA 540
>At5g10440.1 68418.m01210 cyclin family protein similar to cyclin
D2.1 protein [Nicotiana tabacum] GI:4160298; contains
Pfam profile PF00134: Cyclin, N-terminal domain
Length = 298
Score = 46.8 bits (106), Expect = 2e-05
Identities = 43/186 (23%), Positives = 85/186 (45%), Gaps = 7/186 (3%)
Query: 29 VLLNLLALERSHALHTDYFQNVQI-DIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYM 87
++ ++ ER H+ DY + ++ D+ +R W+ LA++Y+
Sbjct: 38 IVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICLAMNYL 97
Query: 88 DRFLAQRAISRQQ---LQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHE-VRQWE 143
DRFL+ + + +QLLAV + LA+K + + + L V+ + V++ E
Sbjct: 98 DRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQRME 157
Query: 144 IMLLQRLNWQLSVATAFDFVEPFLARVPW--GRSNSLIRTHALTLTSVCYTETEFLLVPP 201
+++L L W+L T +V FL+++ +S + T +L + + +FL
Sbjct: 158 LLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDFLEFRA 217
Query: 202 SMVAVA 207
S +A A
Sbjct: 218 SEIAAA 223
>At4g03270.1 68417.m00446 cyclin family protein similar to CycD3;2
[Lycopersicon esculentum] GI:6434199 ; contains Pfam
profiles PF00134: Cyclin, N-terminal domain, PF02984:
Cyclin, C-terminal domain
Length = 302
Score = 41.9 bits (94), Expect = 5e-04
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 82 LAVSYMDRFLAQRAISRQQ---LQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHE 138
LAV+Y+DRFL+ + + + L+L++++ + L++K R+ DL + + +
Sbjct: 80 LAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKPDMSVSDLP---VEGEFFDAQ 136
Query: 139 -VRQWEIMLLQRLNWQLSVATAFDFVEPFLARVPWGRSNSLIRTHAL-----TLTSVCYT 192
+ + E ++L L W++ T F F+ F++ + L+ H+L LT
Sbjct: 137 MIERMENVILGALKWRMRSVTPFSFLAFFISLFELKEEDPLLLKHSLKSQTSDLTFSLQH 196
Query: 193 ETEFLLVPPSMVAVACITAAA 213
+ FL PS++A A + A+
Sbjct: 197 DISFLEFKPSVIAGAALLFAS 217
>At5g48630.1 68418.m06014 cyclin family protein similar to SP|P55168
Cyclin C {Gallus gallus}; contains Pfam profile PF00134:
Cyclin, N-terminal domain
Length = 253
Score = 35.1 bits (77), Expect = 0.055
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 83 AVSYMDRFLAQRAISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTD----NSVYPHE 138
AV+YM R +++++ + +L+A T + LA K + + LL Y + + +E
Sbjct: 65 AVTYMRRVYTRKSLTEYEPRLVAPTCLYLACKAEES-VVHAKLLVFYMKKLYADEKFRYE 123
Query: 139 VR---QWEIMLLQRLNWQLSVATAFDFVEPFLARVPWGRSNSLIRTHALT-LTSVCYTET 194
++ + E+ +L+ LN+ L V + + FL N TH L + Y
Sbjct: 124 IKDILEMEMKVLEALNFYLVVFHPYRSLPEFLQD---SGINDTSMTHLTWGLVNDTYRMD 180
Query: 195 EFLLVPPSMVAVACITAAA 213
L+ PP ++ +ACI A+
Sbjct: 181 LILIHPPFLITLACIYIAS 199
>At5g48640.1 68418.m06015 cyclin family protein similar to SP|P55168
Cyclin C {Gallus gallus}; contains Pfam profile PF00134:
Cyclin, N-terminal domain
Length = 253
Score = 34.3 bits (75), Expect = 0.095
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 83 AVSYMDRFLAQRAISRQQLQLLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQW 142
A++YM R ++++ + +L+A+T + LASK + + +L+ + +YP E ++
Sbjct: 65 AITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLV--FYIKRLYPDEYNKY 122
Query: 143 EIMLLQRLNWQLSVATAFDF----VEPFLARVPWGRSNSL--IRTHALT--LTSVCYTET 194
E L L ++ V A D+ P+ + + + +L + + +T + + Y
Sbjct: 123 E--LKDILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAALNDVNMNQITWGIVNDTYKMD 180
Query: 195 EFLLVPPSMVAVACITAAA 213
L+ PP +A+ACI A+
Sbjct: 181 LILVHPPYRIALACIYIAS 199
>At1g34460.1 68414.m04281 cyclin, putative strong similarity to
cyclin [Arabidopsis thaliana] GI:1360646
Length = 504
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 47 FQNVQIDIQPFMRKVVTTWMLXXXXXXXXXXXXFPLAVSYMDRFLAQRAISRQQLQL 103
+ ++Q ++ MR ++ W+L L V+ +DRFL +A+ +++LQ+
Sbjct: 292 YMHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLYVKAVPKRELQV 348
>At5g38190.1 68418.m04602 myosin heavy chain-related
Length = 969
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 80 FPLAVSYMDRFLAQRAISRQQLQLLAV-TTMLLASKFRQCH-PLSVDLLCAYTDNSVYPH 137
FP+ ++ RF R I+ QL + ++ T L +C PLSV+L+ T S PH
Sbjct: 176 FPIP-DFLMRFCRNRQIAISQLTVASIRTAACLQMLCARCGIPLSVELMEELTSFSKVPH 234
Query: 138 EVRQ 141
++ Q
Sbjct: 235 KLGQ 238
>At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 759
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Query: 103 LLAVTTMLLASKFRQCHPLSVDLLCAYTDNSVYPHEVRQWEIMLLQRLNWQLSVATAFDF 162
+L + L + + + + V LCA D + YP L+Q L W + + F
Sbjct: 284 ILQLRKELYLQPYEEINWMKVRHLCAKED-TYYPRP-------LVQELVWD----SLYIF 331
Query: 163 VEPFLARVPWGRSNSLIRTHALTL 186
EPFLAR P+ N L+R AL L
Sbjct: 332 AEPFLARWPF---NKLLREKALQL 352
>At1g32010.1 68414.m03938 myosin heavy chain-related
Length = 835
Score = 29.1 bits (62), Expect = 3.6
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 80 FPLAVSYMDRFLAQRAISRQQLQLLAV-TTMLLASKFRQCH-PLSVDLLCAYTDNSVYPH 137
FP+ ++ RF R I+ QL + ++ T L +C PLSV+L+ T S PH
Sbjct: 176 FPIP-DFLMRFCRNRQIAISQLTVASIRTAACLQMLCARCGIPLSVELMEELTSFSKVPH 234
Query: 138 EVRQ 141
++ Q
Sbjct: 235 KLGQ 238
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.324 0.133 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,797,127
Number of Sequences: 28952
Number of extensions: 193048
Number of successful extensions: 593
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 553
Number of HSP's gapped (non-prelim): 41
length of query: 286
length of database: 12,070,560
effective HSP length: 80
effective length of query: 206
effective length of database: 9,754,400
effective search space: 2009406400
effective search space used: 2009406400
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 59 (27.9 bits)
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