Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001197-TA|BGIBMGA001197-PA|IPR003307|eIF4-
gamma/eIF5/eIF2-epsilon
(535 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical pr... 86 5e-17
U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical p... 39 0.008
U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical p... 38 0.013
U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical p... 38 0.023
Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical pr... 34 0.22
Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 31 2.0
AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical ... 31 2.7
AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical ... 31 2.7
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 29 8.2
AC006747-2|AAF60508.1| 264|Caenorhabditis elegans Hypothetical ... 29 8.2
>Z54284-3|CAA91063.1| 666|Caenorhabditis elegans Hypothetical
protein D2085.3 protein.
Length = 666
Score = 86.2 bits (204), Expect = 5e-17
Identities = 68/266 (25%), Positives = 122/266 (45%), Gaps = 21/266 (7%)
Query: 5 KENIVQAVVIMDTFNSNFSPLTDNKP-MGFLEVAGVPLIDYVLESLALGGVGEAILFCCQ 63
+E+ + A+VI+D F+ F+P ++ P G + + VP I++ L L V +L
Sbjct: 15 EEHPLVAIVILDAFDQRFAPTHESYPCFGTIPICNVPAINFALSWLMRTEVKNVMLVVSG 74
Query: 64 NGQKIKEHVQKHQDNKSLWSLTMD-IQILMSDTCQTMGDVMRELDAAALLKGYFVL-AGI 121
VQ+ W L D +++ D ++GD MRE+ L+ G F+L +
Sbjct: 75 LNADHATSVQRE------WRLAFDEFTVVVCDGASSVGDCMREIHNRELITGDFMLISNP 128
Query: 122 NSITNMNFASLLEQHKQTCKKDKGTAMTLVYKKLSWEHPLISSDRSTFLAANENTKKVLV 181
++ + ++ + + ++ +++ MTL+Y E+P L N T K+++
Sbjct: 129 TAVVSSTLSAQISEFRKRRRENPDNVMTLLYSNR--ENP-----EHLVLGINSETSKLML 181
Query: 182 HKRYRPKSKEKIISLPLDLVLNNSEVKLHHNLVDTNIALCSPTVPPLFSDNFDFQTRDDF 241
S ++ + D EV + +L T IA CS + FSDNFDF DD
Sbjct: 182 FPA--ANSLNQLKASKKDFY---DEVDIRRDLTPTGIAFCSRLIATQFSDNFDFVGIDDV 236
Query: 242 IHGILINEEILASSLYYTLLKSNQYA 267
+ IL ++IL S++ +L + A
Sbjct: 237 VREILSKDDILGMSVHVEVLSPKERA 262
Score = 63.7 bits (148), Expect = 3e-10
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 29/187 (15%)
Query: 371 TKMFLQEVIDSLARGYD-EKLKCDYLILEINSSRYAYNIQLNEVNFFVVRALLSMPVLSE 429
TKMF EV++S+ + + E LILEINSS+ A N+ ++EV V A + + +
Sbjct: 486 TKMFHDEVLESMQKILESENSLMRNLILEINSSKLACNVTMDEVARNVFAAFMKL----K 541
Query: 430 AKNVLTTVKDILKYFRPVLANYIKSKSSIMD----------------C----LRAVEDTC 469
+K+++ ++P+ NY K+ + + C L A+ED
Sbjct: 542 HNQDFNKMKELIVKWQPLFLNYYKTSAESLKVKSADQKRFELDLKRRCQIQLLLAIEDKF 601
Query: 470 LNCEWLDGKSGQILHLLY-EADVVDEDSLVDWYAELKENANPFVKQPSLVKFFEWLQEAS 528
E K+ ++H LY EAD++DEDS+++W + E + + + K +WLQE
Sbjct: 602 DRDESFGVKAQALVHYLYQEADILDEDSIIEWAGSIAEESK---LKGLMKKIVDWLQEDD 658
Query: 529 EESDDSE 535
+E + +
Sbjct: 659 DEEESED 665
>U64857-13|AAC25859.2| 436|Caenorhabditis elegans Hypothetical
protein C37C3.2a protein.
Length = 436
Score = 39.1 bits (87), Expect = 0.008
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 436 TVKDILKYFRPVLANYIKSKSSIMDCLRAVEDTCLNCEW-LDGKSGQILHLLYEADVVDE 494
T K I K+ +L + K + L VE E L KS I+ LY+ DV +E
Sbjct: 276 TDKQISKHRNLLLRFTLNDKKAQRYLLGGVEQVIHKHEAELLSKSAHIIKSLYDEDVCEE 335
Query: 495 DSLVDW--YAELKENANPFVKQ--PSLVKFFEWLQEASEESDD 533
DSL+ W K + F K+ + WL+EA EE+++
Sbjct: 336 DSLISWGEKPSSKYVSKSFAKKIIENSQPVLNWLKEAEEETEE 378
>U64857-12|AAN84849.1| 413|Caenorhabditis elegans Hypothetical
protein C37C3.2c protein.
Length = 413
Score = 38.3 bits (85), Expect = 0.013
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 436 TVKDILKYFRPVLANYIKSKSSIMDCLRAVEDTCLNCEW-LDGKSGQILHLLYEADVVDE 494
T K I K+ +L + K + L VE E L KS I+ LY+ DV +E
Sbjct: 276 TDKQISKHRNLLLRFTLNDKKAQRYLLGGVEQVIHKHEAELLSKSAHIIKSLYDEDVCEE 335
Query: 495 DSLVDW--YAELKENANPFVKQ--PSLVKFFEWLQEASEESD 532
DSL+ W K + F K+ + WL+EA EE++
Sbjct: 336 DSLISWGEKPSSKYVSKSFAKKIIENSQPVLNWLKEAEEETE 377
>U64857-14|AAL16313.1| 402|Caenorhabditis elegans Hypothetical
protein C37C3.2b protein.
Length = 402
Score = 37.5 bits (83), Expect = 0.023
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 478 KSGQILHLLYEADVVDEDSLVDW--YAELKENANPFVKQ--PSLVKFFEWLQEASEESDD 533
KS I+ LY+ DV +EDSL+ W K + F K+ + WL+EA EE+++
Sbjct: 285 KSAHIIKSLYDEDVCEEDSLISWGEKPSSKYVSKSFAKKIIENSQPVLNWLKEAEEETEE 344
>Z72508-5|CAA96638.1| 525|Caenorhabditis elegans Hypothetical
protein F28H7.6 protein.
Length = 525
Score = 34.3 bits (75), Expect = 0.22
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 85 TMDIQILMSDTCQTMGDVMRELDAAALLKGYFVLAGINSITNMNFASLLEQHKQTCKKDK 144
T + +S+T + + ++EL A + G ++A SIT ++F L + C +
Sbjct: 346 TFQGDVYLSETSGNLSERIKELSYAHTINGQLLIANNPSITKLSFPFLKKIKSTKCPALQ 405
Query: 145 GTAMTLVYKKLSWEHPLISSDRSTFLAANENTKKVLVH 182
+ MT + L H S RS + N+ K+ +H
Sbjct: 406 ISNMTNLEFLLFQSHVEFSCRRSGPIVMITNSSKLYLH 443
>Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical
protein C54G4.2 protein.
Length = 423
Score = 31.1 bits (67), Expect = 2.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Query: 165 DRSTFLAANENTKKVLVHKRYRPKSKEK 192
+RST AA + KKV+ K+ RPKSK K
Sbjct: 21 NRSTGAAAQQKPKKVVESKKRRPKSKTK 48
>AC006780-7|AAF60648.1| 394|Caenorhabditis elegans Hypothetical
protein Y47D9A.1b protein.
Length = 394
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 20 SNFSPLTDNKPMGFLEVAGVPLIDYVLESLA-LGGVGEAIL 59
+ F PL+ P +AGVPLI++ ++ L L G+ E +L
Sbjct: 9 TRFRPLSLQLPKPLFPIAGVPLIEHHIDQLCQLSGLSEILL 49
>AC006780-6|AAF60647.1| 401|Caenorhabditis elegans Hypothetical
protein Y47D9A.1a protein.
Length = 401
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 20 SNFSPLTDNKPMGFLEVAGVPLIDYVLESLA-LGGVGEAIL 59
+ F PL+ P +AGVPLI++ ++ L L G+ E +L
Sbjct: 16 TRFRPLSLQLPKPLFPIAGVPLIEHHIDQLCQLSGLSEILL 56
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.1 bits (62), Expect = 8.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 152 YKKLSWEHPLIS-SDRSTFLAANENTKKVLVHKRYRPKSKEKIISLPLD 199
YKK+S +H L +DR + A +N +KV K+ + K+ I D
Sbjct: 127 YKKVSEKHYLKKIADREFWCAEKDNNRKVETEKKKKSAEKKSTIGFSYD 175
>AC006747-2|AAF60508.1| 264|Caenorhabditis elegans Hypothetical
protein Y39A3A.2 protein.
Length = 264
Score = 29.1 bits (62), Expect = 8.2
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 241 FIHGILINEEILASSLYYTLLKSNQYAAAITNWKTYQTVC 280
F + +LIN ++ +Y +L + Y I +W T+C
Sbjct: 8 FNYPVLINADLKLIEIYRQILGDSNYTEIIDSWNYCMTIC 47
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,115,615
Number of Sequences: 27539
Number of extensions: 490427
Number of successful extensions: 1183
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1171
Number of HSP's gapped (non-prelim): 13
length of query: 535
length of database: 12,573,161
effective HSP length: 85
effective length of query: 450
effective length of database: 10,232,346
effective search space: 4604555700
effective search space used: 4604555700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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