Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001196-TA|BGIBMGA001196-PA|IPR008331|Ferritin and Dps,
IPR009040|Ferritin-like, IPR009078|Ferritin/ribonucleotide
reductase-like
(213 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 40 0.001
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26) 36 0.033
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 34 0.10
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.31
SB_25562| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_13631| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_24482| Best HMM Match : KID (HMM E-Value=0.045) 28 5.0
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 28 6.7
SB_28394| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 44 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 103
+N+QI E + Y+S+A F G +FMK EE +H + K+QL RG
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGR 194
Query: 104 PNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLS 163
+ I++P D +A + +L +E+ VNQ L ++ A D D++ S YL+
Sbjct: 195 IVLQDIKRPERDDWGCGQDAIQAALDLEKHVNQALLDLHKVAEKHGDSQMQDWLESHYLT 254
Query: 164 EQIQSINEINHYIIKLSSFG 183
EQ+++I E+ ++ L G
Sbjct: 255 EQVEAIKELAGHLTNLKRVG 274
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 65.3 bits (152), Expect = 4e-11
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 35 HTACKIADLINRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFI 94
H C+ IN+QI E + YLS+A F G +F+K EE +H + +
Sbjct: 196 HEECEAG--INKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLM 253
Query: 95 KYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCA 154
K+Q RG + I+KP + +++ + +L +E+ VNQ L ++ A D
Sbjct: 254 KFQNERGGRIVLQDIKKPEKDEWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGDAQMT 313
Query: 155 DFVTSVYLSEQIQSINEINHYIIKLSSFG 183
DF+ +L+EQ+++I E+ ++ L G
Sbjct: 314 DFIEGNFLTEQVEAIKELAGHLTNLKRVG 342
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 74 GAGGFFMKMYFEELDHMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQ 133
G FF K EE H F+++ RG + I KP + A R +L +E++
Sbjct: 13 GFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKLHHIMKPCRDHWGNGLMAMRDALYLEKE 72
Query: 134 VNQLLEEIVTEANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSFG 183
+N L ++ A+ +D DF+ S +L EQ+ SI + +Y+ L G
Sbjct: 73 INHALLDLHQVADTNRDPQVQDFLESNFLGEQVDSIKTLANYVSTLQRLG 122
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 44 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 103
+N+QI E + Y+S+A F G +FM+ EE +H + K+QL RG
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGR 209
Query: 104 PNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLS 163
+ I++P D + + +L +E+ VNQ L ++ A D D++ S YL+
Sbjct: 210 IVLQDIKRPERDDWGCGQDVIQAALDLEKHVNQALHDLHKVAEKHGDSQMQDWLESHYLT 269
Query: 164 EQIQSINEINHYIIKLSSFG 183
EQ+++I E+ ++ L G
Sbjct: 270 EQVEAIKELAGHMTNLKRVG 289
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 80 MKMYFEELD-HMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLL 138
M YF+ D H+ GF K+ + + +KP + +EA + +L +E+ VNQ L
Sbjct: 33 MACYFDREDVHLPGFHKFFKKQAHEEREHAEKKPERDEWGSGLEAMQTALDLEKHVNQAL 92
Query: 139 EEIVTEANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFD 193
E+ A D +DF+ +L+EQ++SI E++ YI L G + ++ FD
Sbjct: 93 IELEKTAEKNGDAQMSDFIEDHFLTEQVESIRELSGYIAVLKKVGPGL-GVYQFD 146
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/76 (23%), Positives = 40/76 (52%)
Query: 123 AFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSF 182
A +L +E+++ L+ + +A + D DF+ +L+EQ+ SI ++++Y+ L
Sbjct: 13 AMEDALALEKEILSSLQALHRKAQEENDAQMQDFIEETFLNEQMDSIKQLSNYVSTLRRL 72
Query: 183 GDDIHAIHNFDTSLIK 198
G + + FD ++
Sbjct: 73 GGEGLGEYQFDKETLQ 88
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 44 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLIRGNI 103
+N+QI E + Y+S+A F G +F+K EE +H + K+QL RG
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRGGR 77
Query: 104 PNICGIEKPNLPD 116
+ I++P D
Sbjct: 78 IVLQDIKRPERDD 90
>SB_18389| Best HMM Match : Ferritin (HMM E-Value=2.8e-26)
Length = 175
Score = 35.5 bits (78), Expect = 0.033
Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 4/126 (3%)
Query: 40 IADLINRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQGFIKYQLI 99
+ L+N Q + E + YL++A +L+ ++ + G+ K EE +H KY
Sbjct: 15 VEKLLNLQSKIESDASTKYLAMAA-WLD-RNGFENTAGYMYKQSEEEREHFLKVFKYITE 72
Query: 100 RGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEANDIKDYHCADFVTS 159
G I + + + E F +L+ E V + +++ + DY +F+
Sbjct: 73 MGGIAVTPSVSEVQ-QEFASFREVFEIALQNEIAVTHAVNKVIAKCRQENDYATEEFM-M 130
Query: 160 VYLSEQ 165
Y+ EQ
Sbjct: 131 WYVKEQ 136
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 33.9 bits (74), Expect = 0.10
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 80 MKMYFEELDHMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLE 139
MK EE +H + K+QL RG + I++P D +A + +L +E+ VNQ L
Sbjct: 1 MKASHEEREHAEKLAKFQLQRGGRIVLQDIKRPERDDWGCGQDAIQAALDLEKHVNQALH 60
Query: 140 EI 141
++
Sbjct: 61 DL 62
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 140 EIVTEANDIKDY---HCADFVTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTSL 196
+IVT I Y DF+ +L+EQ+ SI ++++Y+ L G + + FD
Sbjct: 142 QIVTMCAQIPRYPSLQMQDFIEETFLNEQMDSIKQLSNYVSTLRRLGGEGLGEYQFDKET 201
Query: 197 IK 198
++
Sbjct: 202 LQ 203
>SB_25562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 110 EKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEAND 147
E P LP+N PL E SLK Q NQ L ++ A D
Sbjct: 82 EPPYLPNNRPLAERRLCSLKKRFQANQELFDMYMTAVD 119
>SB_13631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 16 KVKFYPQKIIIYNYSNVKKHTACKIADLINRQIQTEQQVAQHYLSLAVTFLNVKS 70
K K ++I+I SN K +D +NRQ+Q + + L++ +N S
Sbjct: 27 KTKAEIERIVILGISNSPKSVVLTSSDTVNRQLQFTHDKSAYTLTIKKPAVNAAS 81
>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
Length = 1714
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 85 EELDHMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQ----VNQLLEE 140
EE H+ I Y RG IP+ I + L P+ E+ +Y+ ++E+Q ++Q E+
Sbjct: 558 EESRHVIDPINYW--RGKIPSRLRIRRTTLATGSPMRESTQYATQIEKQAFSKISQWKED 615
Query: 141 IVTEANDI 148
+ +D+
Sbjct: 616 FALKLDDV 623
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/48 (37%), Positives = 21/48 (43%)
Query: 44 INRQIQTEQQVAQHYLSLAVTFLNVKSLYHGAGGFFMKMYFEELDHMQ 91
IN+QI E YLS+A F G FF K EE +H Q
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHAQ 85
>SB_28394| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 128 LKMEEQVNQLLEEIVTEANDIKDYHCADFVTSVY-LSEQIQSINEINHYIIKLSSFGDDI 186
LK+ + +L+ ++ +K Y + +Y + I + ++ I+KL DI
Sbjct: 106 LKLYPMRSDILKRYPIRSDILKLYPMRSDILKLYPIRSNILKLYPMSSNILKLYPMRSDI 165
Query: 187 HAIHNFDTSLIKLFPF-SNRLNLY 209
++ + ++KL+P S+ L LY
Sbjct: 166 LKLYPMRSEILKLYPMRSDPLKLY 189
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.324 0.139 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,616,044
Number of Sequences: 59808
Number of extensions: 253678
Number of successful extensions: 567
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 550
Number of HSP's gapped (non-prelim): 22
length of query: 213
length of database: 16,821,457
effective HSP length: 79
effective length of query: 134
effective length of database: 12,096,625
effective search space: 1620947750
effective search space used: 1620947750
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 58 (27.5 bits)
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