GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001196-TA|BGIBMGA001196-PA|IPR008331|Ferritin and Dps,
IPR009040|Ferritin-like, IPR009078|Ferritin/ribonucleotide
reductase-like
         (213 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    28   0.24 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.56 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    25   1.3  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
           cell-adhesion protein protein.
          Length = 1881

 Score = 27.9 bits (59), Expect = 0.24
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 100 RGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTEAND 147
           R  +P I  +   N  DN P+    RY ++++E   +    IV EA D
Sbjct: 606 RNTVPLILNVLDVN--DNAPVFVQKRYEVRLKENAFEFESPIVVEARD 651


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 7   TVSNKLKLIKVKFYPQKIIIYNYSNVKKHTACKIADLINRQIQTEQQVAQHYLSLAVTFL 66
           T   K+ L+K+    +++   N    +KH  CK+A+   + ++  +  A  YL    T  
Sbjct: 248 TTRYKVPLLKIN---ERVDALNEERTEKHNRCKLAEREMKDLEKPKTEAVEYLKQENTLT 304

Query: 67  NVKS 70
             ++
Sbjct: 305 RTRN 308


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 21/111 (18%), Positives = 50/111 (45%), Gaps = 17/111 (15%)

Query: 85  EELDHMQGFIKYQLIRGNIPNICGIEKPNLPDNLPLIEAFRYSLKMEEQVNQLLEEIVTE 144
           EE++   G+I+ ++++ ++        P++P+ +P     R  + +E Q+ +   EIV  
Sbjct: 59  EEMERKIGYIRREIVKDSVAI------PDMPEVIPRTPNSREIIDLEAQLEKTENEIV-- 110

Query: 145 ANDIKDYHCADFVTSVYLSEQIQSINEINHYIIKLSSFGDDIHAIHNFDTS 195
             ++ + + A       L +    + E+ H + K   F  D   + N + +
Sbjct: 111 --ELSENNNA-------LLQNFMELTELKHVLEKTQVFFSDKSNVQNLEAT 152


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.139    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,076
Number of Sequences: 2123
Number of extensions: 7844
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 21
Number of HSP's gapped (non-prelim): 4
length of query: 213
length of database: 516,269
effective HSP length: 61
effective length of query: 152
effective length of database: 386,766
effective search space: 58788432
effective search space used: 58788432
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)