GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001195-TA|BGIBMGA001195-PA|undefined
         (150 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   1.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   7.9  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   7.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   7.9  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 1   MPTYELALLLRNMPKP 16
           +PTY+   + RN+PKP
Sbjct: 194 LPTYKWMQVKRNVPKP 209


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 49  YKSTAHGMTHKEANYFIF 66
           Y++ AHGMT ++   F F
Sbjct: 173 YETVAHGMTVQKTTLFFF 190


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 1   MPTYELALLLRNMPKP 16
           +PTY+   + RN+PKP
Sbjct: 194 LPTYKWMQVKRNVPKP 209


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 1   MPTYELALLLRNMPKP 16
           +PTY+   + RN+PKP
Sbjct: 194 LPTYKWMQVKRNVPKP 209


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 73  KAVIDLKEEYKRDVDIVRQRFFKVKEEERK 102
           +A +DLKE+ K  V +   +     EE R+
Sbjct: 467 RAFLDLKEDNKTQVAVKMLKESPTSEEIRQ 496


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)

Query: 122 MIQIGKTQVNR 132
           MI++GKT+V R
Sbjct: 1   MIEVGKTRVKR 11


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
          protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 7.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 28 AIFDCGGIIRNIENLGFRP 46
          A +DC G+IR+     + P
Sbjct: 62 AAYDCEGVIRHHGQWNYSP 80


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,017
Number of Sequences: 317
Number of extensions: 1495
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 150
length of database: 114,650
effective HSP length: 52
effective length of query: 98
effective length of database: 98,166
effective search space:  9620268
effective search space used:  9620268
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)