Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001195-TA|BGIBMGA001195-PA|undefined
(150 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11) 31 0.40
SB_33687| Best HMM Match : Filament (HMM E-Value=0.1) 30 0.70
SB_58458| Best HMM Match : Guanylate_cyc (HMM E-Value=1.2e-36) 30 0.93
SB_56363| Best HMM Match : Macscav_rec (HMM E-Value=0.74) 29 2.1
SB_36571| Best HMM Match : Macscav_rec (HMM E-Value=0.74) 29 2.1
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 3.7
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.7
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 27 4.9
SB_9796| Best HMM Match : uDENN (HMM E-Value=1.1e-35) 27 4.9
SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_18858| Best HMM Match : WXG100 (HMM E-Value=0.65) 27 6.5
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 27 8.6
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18) 27 8.6
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_25781| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064) 27 8.6
>SB_2495| Best HMM Match : Pox_A_type_inc (HMM E-Value=8.2e-11)
Length = 2024
Score = 31.1 bits (67), Expect = 0.40
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Query: 17 ELKTSLKRISHAIFDCGGIIRNI--ENLGFRPMPYKSTAHGMTHKEANYFIFKIDTPTKA 74
+L+T H + I I EN G + +S A G + I + D +
Sbjct: 1125 KLRTERATFEHQLEGMTSQITRIKAENEGHIKLVLESNAEGYESQ-----IKEKDLVIQQ 1179
Query: 75 VIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDV---QKMIQ 124
+ D +E+Y+ ++ +RQ+ ++EE K TL+ +R ++ +K+IQ
Sbjct: 1180 LRDEREQYENQIESLRQQIVVIREESNKTMTLQLVSRTEGFRTEINEKEKVIQ 1232
>SB_33687| Best HMM Match : Filament (HMM E-Value=0.1)
Length = 700
Score = 30.3 bits (65), Expect = 0.70
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 81 EYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQ 120
EYKR ++ ++++ +V+ E +A L+EE++ + DVQ
Sbjct: 324 EYKRQLEHLQEQLEQVRNERNEAIRLKEEIVDVNHAWDVQ 363
>SB_58458| Best HMM Match : Guanylate_cyc (HMM E-Value=1.2e-36)
Length = 1065
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/46 (28%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 75 VIDLKEEYKRDVD-IVRQRFFKVKEEERKACTLEEELLPPAYREDV 119
+++L E+Y +++ +V +R ++ +E+RK L +LPP+ +D+
Sbjct: 697 MVNLLEKYANNLESLVEERTSQLADEKRKTENLLNRMLPPSVAKDL 742
>SB_56363| Best HMM Match : Macscav_rec (HMM E-Value=0.74)
Length = 187
Score = 28.7 bits (61), Expect = 2.1
Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 17 ELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEA-NYFIFKIDTPTKAV 75
E+K + +R S +I ++ L Y + A K+ + + +D + V
Sbjct: 45 EMKMTSERTSQINARLNSLILELQELKLDLGKYTARAIRQWKKDTKDRYSMLLDNRDRMV 104
Query: 76 IDLKEEYKRDVDIVRQRFFKVK-EEERKACTLEEELLPPAYREDVQKMIQIGKTQV 130
L+EE KR++ I +K+K E+E + ++ + E +Q I++ + ++
Sbjct: 105 RRLEEENKREIQIAEAEKYKLKFEQEERLHREVQQREKELWEERLQAEIRVAEKKL 160
>SB_36571| Best HMM Match : Macscav_rec (HMM E-Value=0.74)
Length = 222
Score = 28.7 bits (61), Expect = 2.1
Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 17 ELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEA-NYFIFKIDTPTKAV 75
E+K + +R S +I ++ L Y + A K+ + + +D + V
Sbjct: 47 EMKMTSERTSQINARLNSLILELQELKLDLGKYTARAIRQWKKDTKDRYSMLLDNRDRMV 106
Query: 76 IDLKEEYKRDVDIVRQRFFKVK-EEERKACTLEEELLPPAYREDVQKMIQIGKTQV 130
L+EE KR++ I +K+K E+E + ++ + E +Q I++ + ++
Sbjct: 107 RRLEEENKREIQIAEAEKYKLKFEQEERLHREVQQREKELWEERLQAEIRVAEKKL 162
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 77 DLKEEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQKMIQ 124
DL+E + D+ + Q FK+ EEE A L E L + V++ ++
Sbjct: 1059 DLRENFSADLSELEQN-FKIIEEENSALKLNVEALESELQLSVKEKLE 1105
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 27.9 bits (59), Expect = 3.7
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 80 EEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQKMIQ 124
EE R + RQR +++E+ER+ E+ LL AYR +++++
Sbjct: 1628 EEASRSEEYERQRQLELQEKERRNKEEEDNLL-DAYRRKQEQLLE 1671
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 27.5 bits (58), Expect = 4.9
Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 73 KAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQK 121
K ++D+KE+Y+ + V++ K+K++ + T E+E Y E ++K
Sbjct: 1183 KNILDVKEQYEAQLARVKKERNKLKQKYEE-LTEEDEEEDAIYEETIEK 1230
>SB_9796| Best HMM Match : uDENN (HMM E-Value=1.1e-35)
Length = 300
Score = 27.5 bits (58), Expect = 4.9
Identities = 9/31 (29%), Positives = 21/31 (67%)
Query: 69 DTPTKAVIDLKEEYKRDVDIVRQRFFKVKEE 99
D+PTK ++ EY ++V++ ++ F +K++
Sbjct: 153 DSPTKRATEVDSEYTQEVEMSNRKTFDMKKD 183
>SB_4799| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1098
Score = 27.5 bits (58), Expect = 4.9
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Query: 8 LLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEANYFIFK 67
++LR PKP T + + + ++R +E LG + Y AH THK I
Sbjct: 357 MVLRLGPKPLSATKARDARYIL-----LLRALEQLGNFEVLYSKPAHFGTHKAKIEGISA 411
Query: 68 IDTPTKAVIDLKEE 81
++ T + D E+
Sbjct: 412 VEISTTLIADRYED 425
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 27.1 bits (57), Expect = 6.5
Identities = 14/65 (21%), Positives = 33/65 (50%)
Query: 74 AVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQKMIQIGKTQVNRF 133
+++D + +KRD++ +RQ +K+++ ++E E++QK + K R
Sbjct: 2213 SILDRLDAHKRDLEALRQAAQDMKDDDTDGLAIQEMKQLIEKFENLQKNVNEKKEYFQRM 2272
Query: 134 TYKFK 138
K++
Sbjct: 2273 ADKWQ 2277
>SB_18858| Best HMM Match : WXG100 (HMM E-Value=0.65)
Length = 222
Score = 27.1 bits (57), Expect = 6.5
Identities = 23/116 (19%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 17 ELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKEA-NYFIFKIDTPTKAV 75
E+K + +R S +I ++ L Y + A K+ + + +D + V
Sbjct: 47 EMKMTSERTSQINARLNSLILELQELKLDLGKYTARAIRQWKKDTKDRYSMLLDNRDRMV 106
Query: 76 IDLKEEYKRDVDIVRQRFFKVK-EEERKACTLEEELLPPAYREDVQKMIQIGKTQV 130
L+E+ KR++ I +K+K E+E + ++ + E +Q I++ + ++
Sbjct: 107 RRLEEKNKREIQIAEAEKYKLKFEQEERLHREVQQREKELWEERLQAEIRVAEKKL 162
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 69 DTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKA------CTLEEELLPP--AYREDVQ 120
DT V DL++E +R +I+ + +V+E +R A C L++ + +D++
Sbjct: 268 DTLRDQVDDLRKELQRCREIISKLQNEVRENQRVANKAKEECALKDHKIDQLRGQNDDLE 327
Query: 121 KMIQIGKTQVNR 132
+ I+ K+++NR
Sbjct: 328 EQIESLKSELNR 339
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 53 AHGMTHKEANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEE 108
+HG E Y K++ ++ + LKE+ + D ++Q+ +V E + +L +
Sbjct: 1146 SHGQKEDEVVYLTQKMEEAGQSAVQLKEKCETLGDTIKQKCDEVSALEEEVRSLRD 1201
>SB_6304| Best HMM Match : RVT_1 (HMM E-Value=3.2e-18)
Length = 404
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 75 VIDLKEEYKRDVDIVRQRFFKVKE 98
V+D KEE KRD I+++ +V E
Sbjct: 154 VVDAKEEVKRDFTIMKKALLEVAE 177
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 78 LKEEYKRDVD-IVRQRFFKVKEEERKACTLEEELL 111
+K+ K DV+ I++QR + +E +RKA LEE+ L
Sbjct: 2208 IKKVQKLDVNKIIQQRQEEERESQRKARLLEEQRL 2242
>SB_25781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 65 IFKIDTPTKAVIDLKEEYKRDV-DIVRQRFFKVKEEERKACTLEEEL 110
I + + K ++ +E +RD+ D++R+R K +E+ RK LEE++
Sbjct: 9 IKETEAKIKGLVSQRE--RRDIIDVLRRRHAKEEEDLRKKFKLEEDV 53
>SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064)
Length = 422
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 90 RQRFFKVKEEERKACTLEEELLPP 113
R+R E+ER C EEE LPP
Sbjct: 226 RRREELTTEQERMQCAQEEETLPP 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.139 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,235,522
Number of Sequences: 59808
Number of extensions: 212645
Number of successful extensions: 509
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 498
Number of HSP's gapped (non-prelim): 22
length of query: 150
length of database: 16,821,457
effective HSP length: 76
effective length of query: 74
effective length of database: 12,276,049
effective search space: 908427626
effective search space used: 908427626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)
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