GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001195-TA|BGIBMGA001195-PA|undefined
         (150 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070674-1|AAL48145.1|  147|Drosophila melanogaster RH10862p pro...   178   2e-45
AE014296-832|AAF47889.1|  147|Drosophila melanogaster CG15016-PA...   178   2e-45
AY051848-1|AAK93272.1|  480|Drosophila melanogaster LD35087p pro...    28   4.6  
AE014298-2920|AAF49009.1|  480|Drosophila melanogaster CG14232-P...    28   4.6  

>AY070674-1|AAL48145.1|  147|Drosophila melanogaster RH10862p
           protein.
          Length = 147

 Score =  178 bits (434), Expect = 2e-45
 Identities = 80/150 (53%), Positives = 110/150 (73%), Gaps = 3/150 (2%)

Query: 1   MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 60
           MP+YELAL+LR +P+PEL + ++R + +I D GGIIR +ENLG R +P+K + HG+ H+E
Sbjct: 1   MPSYELALVLRQLPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHRE 60

Query: 61  ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQ 120
             +F    DT    + DLKEE+ RD+DI+R+  FKV+E E+K CTL EE+LPPAYR+DVQ
Sbjct: 61  GTHFTIAFDTAPTKIADLKEEFGRDIDIIRRYIFKVEEPEQKPCTLHEEMLPPAYRKDVQ 120

Query: 121 KMIQIGKTQVNRFTYKFKYNSGLDYYPFQK 150
           ++I   + +  +   KF YNSGLDYYPFQK
Sbjct: 121 EIIAAAQKKQKK---KFNYNSGLDYYPFQK 147


>AE014296-832|AAF47889.1|  147|Drosophila melanogaster CG15016-PA
           protein.
          Length = 147

 Score =  178 bits (434), Expect = 2e-45
 Identities = 80/150 (53%), Positives = 110/150 (73%), Gaps = 3/150 (2%)

Query: 1   MPTYELALLLRNMPKPELKTSLKRISHAIFDCGGIIRNIENLGFRPMPYKSTAHGMTHKE 60
           MP+YELAL+LR +P+PEL + ++R + +I D GGIIR +ENLG R +P+K + HG+ H+E
Sbjct: 1   MPSYELALVLRQLPRPELISVIRRTAESILDKGGIIRKLENLGSRALPHKVSEHGVVHRE 60

Query: 61  ANYFIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEEELLPPAYREDVQ 120
             +F    DT    + DLKEE+ RD+DI+R+  FKV+E E+K CTL EE+LPPAYR+DVQ
Sbjct: 61  GTHFTIAFDTAPTKIADLKEEFGRDIDIIRRYIFKVEEPEQKPCTLHEEMLPPAYRKDVQ 120

Query: 121 KMIQIGKTQVNRFTYKFKYNSGLDYYPFQK 150
           ++I   + +  +   KF YNSGLDYYPFQK
Sbjct: 121 EIIAAAQKKQKK---KFNYNSGLDYYPFQK 147


>AY051848-1|AAK93272.1|  480|Drosophila melanogaster LD35087p
           protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 64  FIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEE----ELLPPAYREDV 119
           F+  +DT   A     E  ++D D   ++  ++ EE+++A   +E    ELL   Y+E++
Sbjct: 109 FVDLLDTMCSAFRPYIEAVRQDRDETLRKELRLMEEKKEARERQENAQQELLEEGYKEEL 168

Query: 120 QKMIQIGKTQVNRFTYK 136
           Q+  Q+ +  +N+ TY+
Sbjct: 169 QRR-QL-QDALNKQTYQ 183


>AE014298-2920|AAF49009.1|  480|Drosophila melanogaster CG14232-PA
           protein.
          Length = 480

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 6/77 (7%)

Query: 64  FIFKIDTPTKAVIDLKEEYKRDVDIVRQRFFKVKEEERKACTLEE----ELLPPAYREDV 119
           F+  +DT   A     E  ++D D   ++  ++ EE+++A   +E    ELL   Y+E++
Sbjct: 109 FVDLLDTMCSAFRPYIEAVRQDRDETLRKELRLMEEKKEARERQENAQQELLEEGYKEEL 168

Query: 120 QKMIQIGKTQVNRFTYK 136
           Q+  Q+ +  +N+ TY+
Sbjct: 169 QRR-QL-QDALNKQTYQ 183


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,784,347
Number of Sequences: 52641
Number of extensions: 322155
Number of successful extensions: 884
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 878
Number of HSP's gapped (non-prelim): 4
length of query: 150
length of database: 24,830,863
effective HSP length: 79
effective length of query: 71
effective length of database: 20,672,224
effective search space: 1467727904
effective search space used: 1467727904
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)