GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001195-TA|BGIBMGA001195-PA|undefined
         (150 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   2.3  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   3.1  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   7.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)

Query: 15  KPELKT-SLKRISHAIFDCGGI 35
           K ELK  ++  +S  +FDCGG+
Sbjct: 267 KLELKWFAVPAVSGMVFDCGGL 288


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 113 PAYREDVQKMIQ--IGKTQVNRFTYKFKYN 140
           PAYR +VQK I    G  + +   Y +++N
Sbjct: 102 PAYRAEVQKAISECKGIAKGDNCEYAYRFN 131


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 127 KTQVNRFTYKFKYNSGLDY 145
           KT  N   YK+ YN+  +Y
Sbjct: 88  KTIHNNNNYKYNYNNKYNY 106


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.139    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,967
Number of Sequences: 429
Number of extensions: 2153
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 150
length of database: 140,377
effective HSP length: 53
effective length of query: 97
effective length of database: 117,640
effective search space: 11411080
effective search space used: 11411080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)