Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001194-TA|BGIBMGA001194-PA|IPR001412|Aminoacyl-tRNA
synthetase, class I, IPR000924|Glutamyl-tRNA synthetase, class Ic,
IPR007639|Glutaminyl-tRNA synthetase, non-specific RNA-binding region
part 1, IPR007638|Glutaminyl-tRNA synthetase, non-specific RNA-binding
region part 2, IPR005113|uDENN, IPR001194|DENN, IPR011035|Ribosomal
protein L25-like
(2195 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical pr... 501 e-141
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 306 1e-82
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 306 1e-82
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 306 1e-82
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 144 5e-34
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 67 1e-10
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu... 60 2e-08
Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical pr... 57 2e-07
AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical ... 57 2e-07
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 44 0.001
AF036706-6|AAK39275.2| 481|Caenorhabditis elegans Glutamyl(e)/g... 40 0.015
Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical pr... 33 2.3
AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical... 32 4.0
AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical... 32 4.0
AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical ... 32 4.0
AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein. 32 4.0
AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein. 32 4.0
AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein. 32 4.0
>Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical
protein Y41E3.4 protein.
Length = 786
Score = 501 bits (1235), Expect = e-141
Identities = 238/469 (50%), Positives = 319/469 (68%), Gaps = 6/469 (1%)
Query: 8 ERFKLLGLNEQKAKETLKNANVTKVLLAALDEVQLQSLPLGA--GILIYHLATKIKPQTM 65
E LGL++ K ETLKN +T+ + ++ ++ +S + G L+Y LATK+KPQ
Sbjct: 5 EELLSLGLSDSKVAETLKNVKLTETI-GSIVKLASESGEISKQKGTLLYQLATKLKPQVA 63
Query: 66 SKLNFICQYIASGKLDSTLRVDAALDYLLGNINEANVNIEEFEKACGVGVIVTPEQVEQA 125
+ + +YI + + + ++ AA++YLL + + + + +FEK+CGVGV+VT + +E A
Sbjct: 64 AHTPLVVKYIMNDGIKTEPQLSAAIEYLLSHTVKG-IQVPDFEKSCGVGVVVTIDDIEAA 122
Query: 126 VEKHMVKYKQELLEKRYRFNSGIIMQAVRADLTWADGKAIKSEVDVQIFDLLGPKTEADL 185
V K + +++++++ +RY F +G ++ +RA L WADG K EVD++ +LLGPKT DL
Sbjct: 123 VTKVIGQHREKIVAERYSFPAGKLLGELRALLPWADGAITKKEVDLRFLELLGPKTAEDL 182
Query: 186 XXXXXXXXXXXXGDXXXXXXXXXXXXXXQENVESSEDIG-GATSISELMK-KLPFHAPGE 243
+ S E+ GA ++ EL++ + FH GE
Sbjct: 183 APKKKEKKPEGPKPSKDAAAAATAPGTKNQKEASPEEFADGAETMDELLRTRAHFHKVGE 242
Query: 244 NYKSDGYVVTSHTKRLLEEHLKITGGKVRTRFPPEPNGILHIGHAKAININFGYAAAHDG 303
N+K DGYV T T LL+ H+ GGKV TRFPPEPNG+LHIGHAKAININFGYA A G
Sbjct: 243 NFKQDGYVTTPKTAELLKAHVAAVGGKVVTRFPPEPNGVLHIGHAKAININFGYAKAMGG 302
Query: 304 VCFLRYDDTNPXXXXXXXXIGIKDMVEWLGYKPYKITHSSDYFDQLYEWAIQLIKKDLAY 363
VC LR+DDTNP I+D+V WLGY P ++THSSD F QLY WA++LI+K LA+
Sbjct: 303 VCNLRFDDTNPEKEEEKFFSAIEDIVHWLGYDPARVTHSSDNFQQLYLWAVKLIQKGLAF 362
Query: 364 VCHQKSEDIKGFNPPPSPWRIRPIEESLQLFEDMKNGKIDEGDATLRMKITLEEGKQDPV 423
VCHQK E+++GF SPWR RPIEE++QLFEDMKNGK DEG+ATLR+K+TLEEGK DPV
Sbjct: 363 VCHQKVEEMRGFEVQLSPWRERPIEENIQLFEDMKNGKFDEGEATLRLKLTLEEGKVDPV 422
Query: 424 AYRIRFKPHHRTGNKWCIYPTYDYTHCLCDSIEHITHSLCTKEFQSRRA 472
AYRI++ PHHRTGN+WCIYPTYDYTHCLCDSIE+ITHSLCTKEFQSRR+
Sbjct: 423 AYRIKYVPHHRTGNQWCIYPTYDYTHCLCDSIENITHSLCTKEFQSRRS 471
Score = 209 bits (511), Expect = 1e-53
Identities = 105/195 (53%), Positives = 135/195 (69%), Gaps = 4/195 (2%)
Query: 471 RAMVVLEPLKIRIVNFPS-EQPISIQVPDFPSEP-ERGSHSVTFDKVIYIEATDFK-EEM 527
R M VLE LK+ I NF P S+ VPDFPS+P + HSV+ D+ I+IE +D+K ++
Sbjct: 573 RTMAVLEGLKLTIENFSELNLPSSVDVPDFPSDPTDPRKHSVSVDREIFIEKSDYKPDDS 632
Query: 528 EKGYRRLTPTQSVGLRHAGYVIKVSKVIKDPSGKVLELECTAESTDSSEKPKAFIHWVSE 587
+K +RRLTP Q+VGL+H G V++ K +KD G V E+ AE +KPKAFIHWV++
Sbjct: 633 DKSFRRLTPKQAVGLKHIGLVLRFVKEVKDAEGHVTEVVVKAEKLSEKDKPKAFIHWVAK 692
Query: 588 PISIEVRLYEPLFKHKNPEDPNEVPGGFLSDCRDDTLKVM-EAYADSSIKGAKVYDKFQF 646
P+S EVRLY+ LFK KNPED VPGGFLSD D+L V+ A D SI +KVYD+FQF
Sbjct: 693 PVSCEVRLYDRLFKSKNPEDAQLVPGGFLSDINPDSLTVVYNALIDQSIAKSKVYDRFQF 752
Query: 647 ERIGFFSVDPDSSQT 661
ERIGFF VD DS+ +
Sbjct: 753 ERIGFFCVDRDSTSS 767
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 306 bits (751), Expect = 1e-82
Identities = 166/372 (44%), Positives = 229/372 (61%), Gaps = 14/372 (3%)
Query: 770 RDTVWSVLTGQAYDNTPTIVLHDVKEIETWILRLLSAPVPVPGKTRLELEVLSPTAHSPL 829
+D VW++LTG + V+ ++KEIETWIL LLS+PVPVPGKT++++EV+
Sbjct: 183 KDVVWAILTGHYNEPIVPEVMKEIKEIETWILMLLSSPVPVPGKTKVQIEVMPMDLSQVF 242
Query: 830 LFALPDHTRFTLVDFPLHLPLELLGVDTCLKVLTLIILENKIVVQSRDYNALSMSVMALV 889
FALPDHTRFTL+DFPLH+P E+LG+D L+VLT +LE KIV+QSR+YNA+SM ++++V
Sbjct: 243 EFALPDHTRFTLIDFPLHIPFEILGIDMALRVLTAAMLEFKIVIQSRNYNAVSMCILSIV 302
Query: 890 AMLYPLEYMFPAIPLLPSCMSCAEQLLLAPTPFLIGIPATFLTYKKHFKLPDDIWLVDLD 949
A+LYPLEYMFP IPLLP+ M AEQLLLAPTPFLIG+P++F ++K +LP D+ LVDLD
Sbjct: 303 ALLYPLEYMFPVIPLLPAYMPSAEQLLLAPTPFLIGVPSSFFHHRKIRELPSDVILVDLD 362
Query: 950 ATKLISPTGNDQDLPPLPEPEGSVLKSHLKQALNSLTNTTAEQASALLMPSRRDSVGGAT 1009
L P +D +P LPEP+ + LK LK A+N +T T + + S D+ G
Sbjct: 363 TNCLQVP--DDLYIPDLPEPDATHLKERLKNAINKMTTMTVDNET-----SVTDADFGID 415
Query: 1010 LKVQPTWYKGGAESAPHSAAESRRVSVTGTASAGHTPQRHSLASPHGAAQPFNPLIYGND 1069
+ + +SA +V G S HT P + Q + L
Sbjct: 416 IDSVDVACRVAMVQFFNSA------NVFGNFSE-HTRTLRLYPRPVVSLQTDSFLRSRPQ 468
Query: 1070 VDSVDVATRVAMAVEFLAEWSLTPCNVAFLRVQTGVFDPRQIGDKPKWFADQLQPIRFAV 1129
+ AVE+ AE L P N F+RVQ G+ Q+GDKPKWF++ L P+ F V
Sbjct: 469 CTQLITDLCRTQAVEYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMPVHFMV 528
Query: 1130 WDDGSSLNGALR 1141
+ + S+L+ A+R
Sbjct: 529 YPNNSTLDSAIR 540
Score = 301 bits (738), Expect = 5e-81
Identities = 141/279 (50%), Positives = 196/279 (70%), Gaps = 7/279 (2%)
Query: 1808 TSPDTARTYLYQGLIGKERSNLWDQMQFWEDAFLDAVSQERDMIGMDQGANEMMERYKCL 1867
T + R Y+YQ LI + +W +QFWE+AF+D V+QER+++GMDQ +EM++RY L
Sbjct: 1065 TPNEPVRHYIYQELILAVQHQIWQNLQFWENAFVDLVAQEREIVGMDQEPSEMIDRYSAL 1124
Query: 1868 SETERKRLEHEEDRLLSTALYNLTAAMVLFGVEPDTIRNKVRRLLAKSHIGLIYSQEVNH 1927
+++E+KRLE EEDRLLST L+N+TA M++ G ++ KVRRLL K+HIGL+ S+E+N
Sbjct: 1125 NDSEKKRLELEEDRLLSTLLHNMTAYMIMCGTGQKALQQKVRRLLGKAHIGLVCSKEINK 1184
Query: 1928 LLDVVHTLHGNEISLKPLGSRLARRATFTVHEADAA-GDLRFMEVRDDGLVLRSTQGTIV 1986
LLD + + GN I LKPLGSRL ++ +FTV ++ G + FMEV DD +VLRS G
Sbjct: 1185 LLDELPSTQGNFIPLKPLGSRLVQKQSFTVCPGQSSDGQMMFMEVCDDAVVLRSITGAAT 1244
Query: 1987 ERWWYERLVNMTYSPKIRVLCLWRKNGGQTQLHKYYTKKCKALYYCIKEAMERSGRR--- 2043
ERWWYERLVN+TYSPK ++LCLWR++ + +HK++TKKC+ LY C+K AMER+ R
Sbjct: 1245 ERWWYERLVNITYSPKTKILCLWRRHDDKVHMHKFHTKKCRELYQCMKAAMERAAARGKV 1304
Query: 2044 -QDAAELGGEFPVQDCATGEGGLIQADQICYAVLCVFSY 2081
+ LGGEFPV D T +GGL+Q C V +F++
Sbjct: 1305 NVEGRALGGEFPVHDTETNQGGLLQVR--CDGVAVIFAH 1341
Score = 92.7 bits (220), Expect = 3e-18
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 657 DSSQTHAPELLRRYPLTNHDDFPLPLDMVYFCQPEGCVSVGPRRAPGPFASRDTTSFVFT 716
D++ T+ PE+LRRYP +H DF LP D+ FCQPEGC + R A D FVF
Sbjct: 38 DTTVTY-PEILRRYPTDDHKDFILPTDVTVFCQPEGCTTTSARLRKN--ARNDPQFFVFM 94
Query: 717 LTDKDSGKTRYGICVNFYRAVER 739
LT+KDS K RYGIC+NFY++ +R
Sbjct: 95 LTEKDSAKVRYGICLNFYQSFDR 117
Score = 85.8 bits (203), Expect = 3e-16
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 1537 TENQAFLNDLIQHVLEGEGVGWLKLNRLKKLMEDESYRNMVLSKLNRNFNRKSTPCDKVD 1596
++NQ + + L G+ VG +LK+LMEDES R +V SKLN K + + V
Sbjct: 782 SKNQQTVKEFCDQALVGQSVGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVK 841
Query: 1597 DVQ---ARVKGMLKVLQAVVHGLEYTYSNFGLGGMASVFQLAEMAHTHYWS 1644
+VQ + K +K+L+A + G+E +++ G G ASVF + E+AHTHYW+
Sbjct: 842 EVQLTKGQFKAYVKILKACLEGIEVSFNTPGCCGFASVFHVLEIAHTHYWA 892
Score = 38.3 bits (85), Expect = 0.061
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 2068 ADQICYAVLCVFSYFAAGQEQKK 2090
ADQICYAVLCVFS AAG ++++
Sbjct: 1384 ADQICYAVLCVFSLAAAGHKKEE 1406
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 306 bits (751), Expect = 1e-82
Identities = 166/372 (44%), Positives = 229/372 (61%), Gaps = 14/372 (3%)
Query: 770 RDTVWSVLTGQAYDNTPTIVLHDVKEIETWILRLLSAPVPVPGKTRLELEVLSPTAHSPL 829
+D VW++LTG + V+ ++KEIETWIL LLS+PVPVPGKT++++EV+
Sbjct: 183 KDVVWAILTGHYNEPIVPEVMKEIKEIETWILMLLSSPVPVPGKTKVQIEVMPMDLSQVF 242
Query: 830 LFALPDHTRFTLVDFPLHLPLELLGVDTCLKVLTLIILENKIVVQSRDYNALSMSVMALV 889
FALPDHTRFTL+DFPLH+P E+LG+D L+VLT +LE KIV+QSR+YNA+SM ++++V
Sbjct: 243 EFALPDHTRFTLIDFPLHIPFEILGIDMALRVLTAAMLEFKIVIQSRNYNAVSMCILSIV 302
Query: 890 AMLYPLEYMFPAIPLLPSCMSCAEQLLLAPTPFLIGIPATFLTYKKHFKLPDDIWLVDLD 949
A+LYPLEYMFP IPLLP+ M AEQLLLAPTPFLIG+P++F ++K +LP D+ LVDLD
Sbjct: 303 ALLYPLEYMFPVIPLLPAYMPSAEQLLLAPTPFLIGVPSSFFHHRKIRELPSDVILVDLD 362
Query: 950 ATKLISPTGNDQDLPPLPEPEGSVLKSHLKQALNSLTNTTAEQASALLMPSRRDSVGGAT 1009
L P +D +P LPEP+ + LK LK A+N +T T + + S D+ G
Sbjct: 363 TNCLQVP--DDLYIPDLPEPDATHLKERLKNAINKMTTMTVDNET-----SVTDADFGID 415
Query: 1010 LKVQPTWYKGGAESAPHSAAESRRVSVTGTASAGHTPQRHSLASPHGAAQPFNPLIYGND 1069
+ + +SA +V G S HT P + Q + L
Sbjct: 416 IDSVDVACRVAMVQFFNSA------NVFGNFSE-HTRTLRLYPRPVVSLQTDSFLRSRPQ 468
Query: 1070 VDSVDVATRVAMAVEFLAEWSLTPCNVAFLRVQTGVFDPRQIGDKPKWFADQLQPIRFAV 1129
+ AVE+ AE L P N F+RVQ G+ Q+GDKPKWF++ L P+ F V
Sbjct: 469 CTQLITDLCRTQAVEYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMPVHFMV 528
Query: 1130 WDDGSSLNGALR 1141
+ + S+L+ A+R
Sbjct: 529 YPNNSTLDSAIR 540
Score = 301 bits (738), Expect = 5e-81
Identities = 141/279 (50%), Positives = 196/279 (70%), Gaps = 7/279 (2%)
Query: 1808 TSPDTARTYLYQGLIGKERSNLWDQMQFWEDAFLDAVSQERDMIGMDQGANEMMERYKCL 1867
T + R Y+YQ LI + +W +QFWE+AF+D V+QER+++GMDQ +EM++RY L
Sbjct: 1065 TPNEPVRHYIYQELILAVQHQIWQNLQFWENAFVDLVAQEREIVGMDQEPSEMIDRYSAL 1124
Query: 1868 SETERKRLEHEEDRLLSTALYNLTAAMVLFGVEPDTIRNKVRRLLAKSHIGLIYSQEVNH 1927
+++E+KRLE EEDRLLST L+N+TA M++ G ++ KVRRLL K+HIGL+ S+E+N
Sbjct: 1125 NDSEKKRLELEEDRLLSTLLHNMTAYMIMCGTGQKALQQKVRRLLGKAHIGLVCSKEINK 1184
Query: 1928 LLDVVHTLHGNEISLKPLGSRLARRATFTVHEADAA-GDLRFMEVRDDGLVLRSTQGTIV 1986
LLD + + GN I LKPLGSRL ++ +FTV ++ G + FMEV DD +VLRS G
Sbjct: 1185 LLDELPSTQGNFIPLKPLGSRLVQKQSFTVCPGQSSDGQMMFMEVCDDAVVLRSITGAAT 1244
Query: 1987 ERWWYERLVNMTYSPKIRVLCLWRKNGGQTQLHKYYTKKCKALYYCIKEAMERSGRR--- 2043
ERWWYERLVN+TYSPK ++LCLWR++ + +HK++TKKC+ LY C+K AMER+ R
Sbjct: 1245 ERWWYERLVNITYSPKTKILCLWRRHDDKVHMHKFHTKKCRELYQCMKAAMERAAARGKV 1304
Query: 2044 -QDAAELGGEFPVQDCATGEGGLIQADQICYAVLCVFSY 2081
+ LGGEFPV D T +GGL+Q C V +F++
Sbjct: 1305 NVEGRALGGEFPVHDTETNQGGLLQVR--CDGVAVIFAH 1341
Score = 92.7 bits (220), Expect = 3e-18
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 657 DSSQTHAPELLRRYPLTNHDDFPLPLDMVYFCQPEGCVSVGPRRAPGPFASRDTTSFVFT 716
D++ T+ PE+LRRYP +H DF LP D+ FCQPEGC + R A D FVF
Sbjct: 38 DTTVTY-PEILRRYPTDDHKDFILPTDVTVFCQPEGCTTTSARLRKN--ARNDPQFFVFM 94
Query: 717 LTDKDSGKTRYGICVNFYRAVER 739
LT+KDS K RYGIC+NFY++ +R
Sbjct: 95 LTEKDSAKVRYGICLNFYQSFDR 117
Score = 85.8 bits (203), Expect = 3e-16
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 1537 TENQAFLNDLIQHVLEGEGVGWLKLNRLKKLMEDESYRNMVLSKLNRNFNRKSTPCDKVD 1596
++NQ + + L G+ VG +LK+LMEDES R +V SKLN K + + V
Sbjct: 782 SKNQQTVKEFCDQALVGQSVGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVK 841
Query: 1597 DVQ---ARVKGMLKVLQAVVHGLEYTYSNFGLGGMASVFQLAEMAHTHYWS 1644
+VQ + K +K+L+A + G+E +++ G G ASVF + E+AHTHYW+
Sbjct: 842 EVQLTKGQFKAYVKILKACLEGIEVSFNTPGCCGFASVFHVLEIAHTHYWA 892
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 306 bits (751), Expect = 1e-82
Identities = 166/372 (44%), Positives = 229/372 (61%), Gaps = 14/372 (3%)
Query: 770 RDTVWSVLTGQAYDNTPTIVLHDVKEIETWILRLLSAPVPVPGKTRLELEVLSPTAHSPL 829
+D VW++LTG + V+ ++KEIETWIL LLS+PVPVPGKT++++EV+
Sbjct: 183 KDVVWAILTGHYNEPIVPEVMKEIKEIETWILMLLSSPVPVPGKTKVQIEVMPMDLSQVF 242
Query: 830 LFALPDHTRFTLVDFPLHLPLELLGVDTCLKVLTLIILENKIVVQSRDYNALSMSVMALV 889
FALPDHTRFTL+DFPLH+P E+LG+D L+VLT +LE KIV+QSR+YNA+SM ++++V
Sbjct: 243 EFALPDHTRFTLIDFPLHIPFEILGIDMALRVLTAAMLEFKIVIQSRNYNAVSMCILSIV 302
Query: 890 AMLYPLEYMFPAIPLLPSCMSCAEQLLLAPTPFLIGIPATFLTYKKHFKLPDDIWLVDLD 949
A+LYPLEYMFP IPLLP+ M AEQLLLAPTPFLIG+P++F ++K +LP D+ LVDLD
Sbjct: 303 ALLYPLEYMFPVIPLLPAYMPSAEQLLLAPTPFLIGVPSSFFHHRKIRELPSDVILVDLD 362
Query: 950 ATKLISPTGNDQDLPPLPEPEGSVLKSHLKQALNSLTNTTAEQASALLMPSRRDSVGGAT 1009
L P +D +P LPEP+ + LK LK A+N +T T + + S D+ G
Sbjct: 363 TNCLQVP--DDLYIPDLPEPDATHLKERLKNAINKMTTMTVDNET-----SVTDADFGID 415
Query: 1010 LKVQPTWYKGGAESAPHSAAESRRVSVTGTASAGHTPQRHSLASPHGAAQPFNPLIYGND 1069
+ + +SA +V G S HT P + Q + L
Sbjct: 416 IDSVDVACRVAMVQFFNSA------NVFGNFSE-HTRTLRLYPRPVVSLQTDSFLRSRPQ 468
Query: 1070 VDSVDVATRVAMAVEFLAEWSLTPCNVAFLRVQTGVFDPRQIGDKPKWFADQLQPIRFAV 1129
+ AVE+ AE L P N F+RVQ G+ Q+GDKPKWF++ L P+ F V
Sbjct: 469 CTQLITDLCRTQAVEYFAECCLCPKNETFVRVQAGIESAEQVGDKPKWFSESLMPVHFMV 528
Query: 1130 WDDGSSLNGALR 1141
+ + S+L+ A+R
Sbjct: 529 YPNNSTLDSAIR 540
Score = 301 bits (738), Expect = 5e-81
Identities = 141/279 (50%), Positives = 196/279 (70%), Gaps = 7/279 (2%)
Query: 1808 TSPDTARTYLYQGLIGKERSNLWDQMQFWEDAFLDAVSQERDMIGMDQGANEMMERYKCL 1867
T + R Y+YQ LI + +W +QFWE+AF+D V+QER+++GMDQ +EM++RY L
Sbjct: 1065 TPNEPVRHYIYQELILAVQHQIWQNLQFWENAFVDLVAQEREIVGMDQEPSEMIDRYSAL 1124
Query: 1868 SETERKRLEHEEDRLLSTALYNLTAAMVLFGVEPDTIRNKVRRLLAKSHIGLIYSQEVNH 1927
+++E+KRLE EEDRLLST L+N+TA M++ G ++ KVRRLL K+HIGL+ S+E+N
Sbjct: 1125 NDSEKKRLELEEDRLLSTLLHNMTAYMIMCGTGQKALQQKVRRLLGKAHIGLVCSKEINK 1184
Query: 1928 LLDVVHTLHGNEISLKPLGSRLARRATFTVHEADAA-GDLRFMEVRDDGLVLRSTQGTIV 1986
LLD + + GN I LKPLGSRL ++ +FTV ++ G + FMEV DD +VLRS G
Sbjct: 1185 LLDELPSTQGNFIPLKPLGSRLVQKQSFTVCPGQSSDGQMMFMEVCDDAVVLRSITGAAT 1244
Query: 1987 ERWWYERLVNMTYSPKIRVLCLWRKNGGQTQLHKYYTKKCKALYYCIKEAMERSGRR--- 2043
ERWWYERLVN+TYSPK ++LCLWR++ + +HK++TKKC+ LY C+K AMER+ R
Sbjct: 1245 ERWWYERLVNITYSPKTKILCLWRRHDDKVHMHKFHTKKCRELYQCMKAAMERAAARGKV 1304
Query: 2044 -QDAAELGGEFPVQDCATGEGGLIQADQICYAVLCVFSY 2081
+ LGGEFPV D T +GGL+Q C V +F++
Sbjct: 1305 NVEGRALGGEFPVHDTETNQGGLLQVR--CDGVAVIFAH 1341
Score = 92.7 bits (220), Expect = 3e-18
Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 657 DSSQTHAPELLRRYPLTNHDDFPLPLDMVYFCQPEGCVSVGPRRAPGPFASRDTTSFVFT 716
D++ T+ PE+LRRYP +H DF LP D+ FCQPEGC + R A D FVF
Sbjct: 38 DTTVTY-PEILRRYPTDDHKDFILPTDVTVFCQPEGCTTTSARLRKN--ARNDPQFFVFM 94
Query: 717 LTDKDSGKTRYGICVNFYRAVER 739
LT+KDS K RYGIC+NFY++ +R
Sbjct: 95 LTEKDSAKVRYGICLNFYQSFDR 117
Score = 85.8 bits (203), Expect = 3e-16
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 1537 TENQAFLNDLIQHVLEGEGVGWLKLNRLKKLMEDESYRNMVLSKLNRNFNRKSTPCDKVD 1596
++NQ + + L G+ VG +LK+LMEDES R +V SKLN K + + V
Sbjct: 782 SKNQQTVKEFCDQALVGQSVGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVK 841
Query: 1597 DVQ---ARVKGMLKVLQAVVHGLEYTYSNFGLGGMASVFQLAEMAHTHYWS 1644
+VQ + K +K+L+A + G+E +++ G G ASVF + E+AHTHYW+
Sbjct: 842 EVQLTKGQFKAYVKILKACLEGIEVSFNTPGCCGFASVFHVLEIAHTHYWA 892
Score = 38.3 bits (85), Expect = 0.061
Identities = 16/23 (69%), Positives = 20/23 (86%)
Query: 2068 ADQICYAVLCVFSYFAAGQEQKK 2090
ADQICYAVLCVFS AAG ++++
Sbjct: 1384 ADQICYAVLCVFSLAAAGHKKEE 1406
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 144 bits (350), Expect = 5e-34
Identities = 81/207 (39%), Positives = 116/207 (56%), Gaps = 5/207 (2%)
Query: 269 GKVRTRFPPEPNGILHIGHAKAININFGYAAAHDGVCFLRYDDTNPXXXXXXXXIGIKDM 328
GKV RFPPE +G LHIGHAKA +N Y A +G +R+DDTNP IK+
Sbjct: 192 GKVVVRFPPEASGYLHIGHAKAALLNQYYQQAFEGQLIMRFDDTNPAKENAHFEHVIKED 251
Query: 329 VEWLGYKPYKITHSSDYFDQLYEWAIQLIKKDLAYVCHQKSEDIKGFNPPPSPWRIR--P 386
+ L P + THSSD+F+ L +L+K+ A+V +E ++ R R
Sbjct: 252 LSMLNIVPDRWTHSSDHFEMLLTMCEKLLKEGKAFVDDTDTETMRNEREQRQDSRNRSNT 311
Query: 387 IEESLQLFEDMKNGKIDEGDATLRMKITLEEGK---QDPVAYRIRFKPHHRTGNKWCIYP 443
E++LQL+E+MK G +RMKI ++ +DP YR + + H RTG K+ +YP
Sbjct: 312 PEKNLQLWEEMKKGSPKGLTCCVRMKIDMKSNNGAMRDPTIYRCKPEEHVRTGLKYKVYP 371
Query: 444 TYDYTHCLCDSIEHITHSLCTKEFQSR 470
TYD+T + DS+E +TH+L T E+ R
Sbjct: 372 TYDFTCPIVDSVEGVTHALRTTEYHDR 398
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 67.3 bits (157), Expect = 1e-10
Identities = 83/346 (23%), Positives = 143/346 (41%), Gaps = 33/346 (9%)
Query: 662 HAPELLRRYPLTNH----DDFPLPLDMVYFCQPEGC-VSVGPRRAPGPFASRDTTSFVFT 716
+ P +L +P ++H +DF L ++ FC P G + P + P S T F
Sbjct: 234 YKPAVLDYFPRSDHSGEMEDFKLAQNVAMFCLPMGALIECWPTKCAPPDRSFST----FV 289
Query: 717 LTDKDSGKTRYGICVNFYRAVERATGAGPRDRGVLRRDSWRKSIEKSSDSAFSRDTVWSV 776
LTD ++G YG V FY + ++ L+ D ++E S + D +
Sbjct: 290 LTD-ENGTKFYGSAVTFYEKYTKQLSEDQLEQLDLKSDEGG-TVEDSGSNNDPADDILFY 347
Query: 777 LTGQAYDNTPTIVLHDVKEIETWILRLLSAPV---PVPGK---TRLELEVLSPTAHSPLL 830
+ + K ++ R+ S P PVP + + L EV PT P +
Sbjct: 348 KNVSICLISRFPFFNSFKRFLFFLHRMSSTPSCSHPVPIERYISHLMYEVSFPTPRRPRV 407
Query: 831 FAL----------PDHTRFTLVDFPLHLPLELLGVDTCLKVLTLIILENKIVVQSRDYNA 880
F D ++ L L L+ LG + + ++ L +LE KI++ S
Sbjct: 408 FMQLGAENISFDSHDDSQLPLNGAQLIDTLKYLGSENLMYLMLLALLEQKILIHSLRPWM 467
Query: 881 LSMSVMALVAMLYPLEYMFPAIPLLPSCMSCAEQLLLAPTPFLIGIPATFLTYKKHFKLP 940
L+ ++ A+++P + P IP P ++ +L AP PF+ G+ + + ++ + P
Sbjct: 468 LAAVAESVCALMFPFHWQCPYIPQCPLGLA---GVLHAPLPFIAGVDSRY--FELYEDPP 522
Query: 941 DDIWLVDLDATKL-ISPTGNDQDLPPLPEPEGSVLKSHLKQALNSL 985
DD+ DLD + + S LP+ LKS L+ L
Sbjct: 523 DDVTCFDLDTSTISFSTVRATFKTSMLPKKPAKQLKSALEDIFGKL 568
>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
(myotubularin) family protein 5 protein.
Length = 1744
Score = 60.1 bits (139), Expect = 2e-08
Identities = 38/133 (28%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 800 ILRLLSAPVPVPGKTRLELEVLSPTAHSPLLFALPDHTRFTLVDFPLHLPLELLGVDTCL 859
++R L+ + G T +E+ + T H L F L + T D + + ++LG +
Sbjct: 140 LIRFLTYELVEEGST---IEIRTKTLHVELGFELIPISPVTGKD--VAMLFKMLGFQNVI 194
Query: 860 KVLTLIILENKIVVQSRDYNALSMSVMALVAMLYPLEYMFPAIPLLPSCMSCAEQLLLAP 919
K++ ++ + +IV+ S LS A++++LYP EY+ + +LP ++ ++L +P
Sbjct: 195 KIIHALLSDCRIVLASSSLMRLSRCQNAILSLLYPFEYVHSCVTILPDSLA---EVLESP 251
Query: 920 TPFLIGIPATFLT 932
TPFLIG+ + F+T
Sbjct: 252 TPFLIGVLSEFVT 264
>Z50028-5|CAA90338.1| 661|Caenorhabditis elegans Hypothetical protein
F46F6.1a protein.
Length = 661
Score = 56.8 bits (131), Expect = 2e-07
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 833 LPDHTRF-TLVDFPLHLPL-ELLGVDTCLKVLTLIILENKIVVQSRDYNALSMSVMALVA 890
+PDHTR TL L + L + ++ E +I+ R +LS + A+
Sbjct: 166 IPDHTRLPTLGSDKFFLEFYNAIDPRQMLAIFASLLKERRILFTGRKVGSLSSCLHAVSM 225
Query: 891 MLYPLEYMFPAIPLLPSCMSCAEQLLLAPTPFLIGIPATFL-TYKKHFKLPDDIWLVDLD 949
+LYP+ + I +LP + +++AP P+LIG+P T L + + + ++ +VD+D
Sbjct: 226 LLYPMCWQSVFITILPESL---VDMVMAPMPYLIGVPKTVLENARLNIRDIGEVVIVDID 282
Query: 950 ATKLISPTGNDQDLPPLPEPEGSVLKSHLKQALNSLTNTTAEQASALLMPSRRDSVGGAT 1009
L SP D+ +P+ + LK+ L+ + +++ +T A+ ++ D G T
Sbjct: 283 EKTLTSPF---DDVAAMPQEVVNFLKAQLR-SQSAMDDTFAKHFLRAMVMLFGDYTSGFT 338
>AL032624-4|CAA21522.1| 661|Caenorhabditis elegans Hypothetical
protein F46F6.1a protein.
Length = 661
Score = 56.8 bits (131), Expect = 2e-07
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 833 LPDHTRF-TLVDFPLHLPL-ELLGVDTCLKVLTLIILENKIVVQSRDYNALSMSVMALVA 890
+PDHTR TL L + L + ++ E +I+ R +LS + A+
Sbjct: 166 IPDHTRLPTLGSDKFFLEFYNAIDPRQMLAIFASLLKERRILFTGRKVGSLSSCLHAVSM 225
Query: 891 MLYPLEYMFPAIPLLPSCMSCAEQLLLAPTPFLIGIPATFL-TYKKHFKLPDDIWLVDLD 949
+LYP+ + I +LP + +++AP P+LIG+P T L + + + ++ +VD+D
Sbjct: 226 LLYPMCWQSVFITILPESL---VDMVMAPMPYLIGVPKTVLENARLNIRDIGEVVIVDID 282
Query: 950 ATKLISPTGNDQDLPPLPEPEGSVLKSHLKQALNSLTNTTAEQASALLMPSRRDSVGGAT 1009
L SP D+ +P+ + LK+ L+ + +++ +T A+ ++ D G T
Sbjct: 283 EKTLTSPF---DDVAAMPQEVVNFLKAQLR-SQSAMDDTFAKHFLRAMVMLFGDYTSGFT 338
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 44.0 bits (99), Expect = 0.001
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 16/194 (8%)
Query: 803 LLSAPVPVPGKTRLELEVLSPTAHSPLLFALPDHTRFTLVDFPLHLPLELLGVDTCLKVL 862
L P+P P T L++ +L T L+ P D + + L V+ +++
Sbjct: 243 LYEVPLPSPSMT-LKIPLLGTT----LVVQRPGPKELPFFDDSIGSIFDYLPVEKFIRLF 297
Query: 863 TLIILENKIVVQSRDYNALSMSVMALVAMLYPLEYMFPAIPLLPSCMSCAEQLLLAPTPF 922
+ +LE++I++ S+D + L +L+A+ +P + P+LP AP P+
Sbjct: 298 SCFLLEHQILLCSKDLSRLMTVCESLLALSFPFRWQMTYAPVLPYSKL---DFFEAPVPY 354
Query: 923 LIGIPATFLTYKKHFKLPDDIWLVDLDATKLISPTGNDQDLPPLPEPEGSVLKSHLKQAL 982
++G ++ F+ ++ +VDLD + P +D+P P L + +K +L
Sbjct: 355 VMGWYYEDTVPEELFQ--SNVCVVDLDTGRSELP----EDVPVF--PGARQLATDIKNSL 406
Query: 983 NSLTNTTAEQASAL 996
L+++ S L
Sbjct: 407 ERLSDSDKMLTSTL 420
>AF036706-6|AAK39275.2| 481|Caenorhabditis elegans
Glutamyl(e)/glutaminyl(q) trnasynthetase protein 3
protein.
Length = 481
Score = 40.3 bits (90), Expect = 0.015
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 264 LKITG---GKVRTRFPPEPNGILHIGHAKAININFGYAAAHDGVCFLRYDDTN 313
+K+TG VR RF P P G LHIG + N+ +A + G LR +DT+
Sbjct: 1 MKLTGFLKQNVRVRFAPSPTGHLHIGGLRTAFFNYLFAKKYGGDFILRIEDTD 53
>Z75538-1|CAA99839.2| 1615|Caenorhabditis elegans Hypothetical protein
F20G4.1 protein.
Length = 1615
Score = 33.1 bits (72), Expect = 2.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 948 LDATKLISPTGNDQDLPPLPEPEGSVLKSHLKQALNSLTNTTAEQASALLMPSRRD 1003
LDA + G+ L + E +V+K H K+ L+++ T+ +LMP R D
Sbjct: 584 LDAALTFAHNGDIDSLTRIIESNMAVMKHHQKRILSAIPTCTSPTKYEILMPKRED 639
>AL110487-11|CAC42369.1| 624|Caenorhabditis elegans Hypothetical
protein Y39E4B.12c protein.
Length = 624
Score = 32.3 bits (70), Expect = 4.0
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 228 SISELMKKLPFHAPGENYKSDGYVVTSHTKRLLEEHLKITGGKVRTRFPPEPNGILHI-- 285
++ ++++ P H E D + HTKR LEE++ GGKV+ + G++
Sbjct: 194 TVHSVLERTPDHLLEEVVLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIRARL 253
Query: 286 -GHAKAININFGYAAAHDGVCFLRYDDTNPXXXXXXXXIGIKDMVEWLGYKPYKITHSSD 344
G A A Y +H C + + + +++ + ++ HS
Sbjct: 254 RGAAVATGEVLTYLDSH-CECMEGWMEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHSKA 312
Query: 345 YFDQL--YEWAIQ 355
YF + ++W +Q
Sbjct: 313 YFTSVGGFDWGLQ 325
>AL110487-10|CAC42368.1| 623|Caenorhabditis elegans Hypothetical
protein Y39E4B.12b protein.
Length = 623
Score = 32.3 bits (70), Expect = 4.0
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 228 SISELMKKLPFHAPGENYKSDGYVVTSHTKRLLEEHLKITGGKVRTRFPPEPNGILHI-- 285
++ ++++ P H E D + HTKR LEE++ GGKV+ + G++
Sbjct: 194 TVHSVLERTPDHLLEEVVLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIRARL 253
Query: 286 -GHAKAININFGYAAAHDGVCFLRYDDTNPXXXXXXXXIGIKDMVEWLGYKPYKITHSSD 344
G A A Y +H C + + + +++ + ++ HS
Sbjct: 254 RGAAVATGEVLTYLDSH-CECMEGWMEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHSKA 312
Query: 345 YFDQL--YEWAIQ 355
YF + ++W +Q
Sbjct: 313 YFTSVGGFDWGLQ 325
>AL110487-9|CAB54435.1| 626|Caenorhabditis elegans Hypothetical
protein Y39E4B.12a protein.
Length = 626
Score = 32.3 bits (70), Expect = 4.0
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 228 SISELMKKLPFHAPGENYKSDGYVVTSHTKRLLEEHLKITGGKVRTRFPPEPNGILHI-- 285
++ ++++ P H E D + HTKR LEE++ GGKV+ + G++
Sbjct: 194 TVHSVLERTPDHLLEEVVLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIRARL 253
Query: 286 -GHAKAININFGYAAAHDGVCFLRYDDTNPXXXXXXXXIGIKDMVEWLGYKPYKITHSSD 344
G A A Y +H C + + + +++ + ++ HS
Sbjct: 254 RGAAVATGEVLTYLDSH-CECMEGWMEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHSKA 312
Query: 345 YFDQL--YEWAIQ 355
YF + ++W +Q
Sbjct: 313 YFTSVGGFDWGLQ 325
>AF031837-1|AAC13673.1| 624|Caenorhabditis elegans GLY5c protein.
Length = 624
Score = 32.3 bits (70), Expect = 4.0
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 228 SISELMKKLPFHAPGENYKSDGYVVTSHTKRLLEEHLKITGGKVRTRFPPEPNGILHI-- 285
++ ++++ P H E D + HTKR LEE++ GGKV+ + G++
Sbjct: 194 TVHSVLERTPDHLLEEVVLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIRARL 253
Query: 286 -GHAKAININFGYAAAHDGVCFLRYDDTNPXXXXXXXXIGIKDMVEWLGYKPYKITHSSD 344
G A A Y +H C + + + +++ + ++ HS
Sbjct: 254 RGAAVATGEVLTYLDSH-CECMEGWMEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHSKA 312
Query: 345 YFDQL--YEWAIQ 355
YF + ++W +Q
Sbjct: 313 YFTSVGGFDWGLQ 325
>AF031836-1|AAC13672.1| 626|Caenorhabditis elegans GLY5b protein.
Length = 626
Score = 32.3 bits (70), Expect = 4.0
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 228 SISELMKKLPFHAPGENYKSDGYVVTSHTKRLLEEHLKITGGKVRTRFPPEPNGILHI-- 285
++ ++++ P H E D + HTKR LEE++ GGKV+ + G++
Sbjct: 194 TVHSVLERTPDHLLEEVVLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIRARL 253
Query: 286 -GHAKAININFGYAAAHDGVCFLRYDDTNPXXXXXXXXIGIKDMVEWLGYKPYKITHSSD 344
G A A Y +H C + + + +++ + ++ HS
Sbjct: 254 RGAAVATGEVLTYLDSH-CECMEGWMEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHSKA 312
Query: 345 YFDQL--YEWAIQ 355
YF + ++W +Q
Sbjct: 313 YFTSVGGFDWGLQ 325
>AF031835-1|AAC13671.1| 623|Caenorhabditis elegans GLY5a protein.
Length = 623
Score = 32.3 bits (70), Expect = 4.0
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 228 SISELMKKLPFHAPGENYKSDGYVVTSHTKRLLEEHLKITGGKVRTRFPPEPNGILHI-- 285
++ ++++ P H E D + HTKR LEE++ GGKV+ + G++
Sbjct: 194 TVHSVLERTPDHLLEEVVLVDDFSDMDHTKRPLEEYMSQFGGKVKILRMEKREGLIRARL 253
Query: 286 -GHAKAININFGYAAAHDGVCFLRYDDTNPXXXXXXXXIGIKDMVEWLGYKPYKITHSSD 344
G A A Y +H C + + + +++ + ++ HS
Sbjct: 254 RGAAVATGEVLTYLDSH-CECMEGWMEPLLDRIKRDPTTVVCPVIDVIDDNTFEYHHSKA 312
Query: 345 YFDQL--YEWAIQ 355
YF + ++W +Q
Sbjct: 313 YFTSVGGFDWGLQ 325
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.133 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,276,523
Number of Sequences: 27539
Number of extensions: 2055842
Number of successful extensions: 5183
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5110
Number of HSP's gapped (non-prelim): 47
length of query: 2195
length of database: 12,573,161
effective HSP length: 93
effective length of query: 2102
effective length of database: 10,012,034
effective search space: 21045295468
effective search space used: 21045295468
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 67 (31.1 bits)
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