Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001193-TA|BGIBMGA001193-PA|undefined
         (234 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17156-1|CAA76660.1|  694|Homo sapiens putative transposase prot...    32   1.5  
Y16947-1|CAA76545.1|  694|Homo sapiens putative transposase Ac-l...    32   1.5  
BC015030-1|AAH15030.1|  694|Homo sapiens ZBED1 protein protein.        32   1.5  
AB018328-1|BAA34505.2|  706|Homo sapiens KIAA0785 protein protein.     32   1.5  
AB014560-1|BAA31635.2|  490|Homo sapiens KIAA0660 protein protein.     31   4.6  
BC036849-1|AAH36849.1|  580|Homo sapiens ataxin 7-like 2 protein.      30   8.0  

>Y17156-1|CAA76660.1|  694|Homo sapiens putative transposase
           protein.
          Length = 694

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 182 PDSSCPFLTVNSEDVADAISSFYSGSAPGLDVPQGQHALIVRVPHAF 228
           P+  C F+  N+E + +A ++ +S   P      GQ AL V+  H +
Sbjct: 72  PEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGY 118


>Y16947-1|CAA76545.1|  694|Homo sapiens putative transposase Ac-like
           protein.
          Length = 694

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 182 PDSSCPFLTVNSEDVADAISSFYSGSAPGLDVPQGQHALIVRVPHAF 228
           P+  C F+  N+E + +A ++ +S   P      GQ AL V+  H +
Sbjct: 72  PEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGY 118


>BC015030-1|AAH15030.1|  694|Homo sapiens ZBED1 protein protein.
          Length = 694

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 182 PDSSCPFLTVNSEDVADAISSFYSGSAPGLDVPQGQHALIVRVPHAF 228
           P+  C F+  N+E + +A ++ +S   P      GQ AL V+  H +
Sbjct: 72  PEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGY 118


>AB018328-1|BAA34505.2|  706|Homo sapiens KIAA0785 protein protein.
          Length = 706

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 182 PDSSCPFLTVNSEDVADAISSFYSGSAPGLDVPQGQHALIVRVPHAF 228
           P+  C F+  N+E + +A ++ +S   P      GQ AL V+  H +
Sbjct: 84  PEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGY 130


>AB014560-1|BAA31635.2|  490|Homo sapiens KIAA0660 protein protein.
          Length = 490

 Score = 30.7 bits (66), Expect = 4.6
 Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 9/115 (7%)

Query: 106 VKENANNNSPYFLEDFKHKPRSIVKRIEAKVHEGDLRGAVRLLVSEDSLAP-FNDETLSA 164
           V+ENAN  S Y+  +       I + +E   HE +          E  L P   ++ L  
Sbjct: 175 VQENAN--SGYY--EAHPVTNGIEEPLEESSHEPEPEPESETKTEE--LKPQVEEKNLEE 228

Query: 165 LRDKH--PTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSAPGLDVPQGQ 217
           L +K   P P  P+SLP  P  +  + +V S+++  + +   SG  P +  P  Q
Sbjct: 229 LEEKSTTPPPAEPVSLPQEPPKAFSWASVTSKNLPPSGTVSSSGIPPHVKAPVSQ 283


>BC036849-1|AAH36849.1|  580|Homo sapiens ataxin 7-like 2 protein.
          Length = 580

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 154 LAPFNDETLSALRDKHPTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSAPGLDV 213
           L+P +  T   L      P  P S+PP  D+  P     S  VA A S       PG  +
Sbjct: 474 LSPSSTGTCPRLPGPTLRPACPASMPPTKDNLVPSYPAGSPSVAAACSQAECMGEPGYHL 533

Query: 214 PQG-QHALIV 222
               QHA+ V
Sbjct: 534 TTACQHAIPV 543


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.318    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,122,442
Number of Sequences: 224733
Number of extensions: 1592254
Number of successful extensions: 8511
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 8507
Number of HSP's gapped (non-prelim): 6
length of query: 234
length of database: 73,234,838
effective HSP length: 88
effective length of query: 146
effective length of database: 53,458,334
effective search space: 7804916764
effective search space used: 7804916764
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)