Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001193-TA|BGIBMGA001193-PA|undefined
(234 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,334... 32 0.35
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752... 31 0.80
09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574... 31 0.80
06_01_0440 + 3127197-3127700,3128299-3128670 31 0.80
01_01_0762 + 5889925-5890136,5891110-5891273,5891755-5891878,589... 31 1.1
05_01_0120 - 828834-831143 30 1.4
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 29 2.4
03_02_0787 + 11180794-11180958,11181051-11181230,11181396-111816... 29 2.4
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555... 29 4.3
08_02_0748 - 20754293-20755136,20755686-20755927,20756012-207562... 28 5.7
01_06_1823 - 40140405-40140965,40141305-40141803,40143830-40143960 28 5.7
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 28 7.5
06_01_0031 - 305457-305663,306248-306523,306824-307609 28 7.5
04_01_0349 - 4570071-4571267 28 7.5
01_03_0280 - 14546334-14546815,14546894-14547560,14550333-145517... 28 7.5
09_02_0082 - 4060018-4061604 27 9.9
01_05_0724 - 24612712-24612852,24612985-24613038,24613340-246134... 27 9.9
>01_01_0450 -
3344203-3344259,3344339-3344506,3344743-3344956,
3345039-3345101,3345582-3345769,3345846-3346029,
3346535-3346606,3346676-3346787,3346878-3346953,
3347050-3347100,3347179-3347260,3347331-3347567,
3347650-3347772,3348141-3348326,3348680-3349625,
3350426-3350551,3350683-3350811,3350918-3351049,
3351167-3351301,3351450-3351575,3352080-3352148,
3352149-3352205,3352302-3352436,3352600-3352704,
3352841-3352906,3353333-3353503,3353806-3353983
Length = 1395
Score = 32.3 bits (70), Expect = 0.35
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 149 VSEDSLAPFNDETLSALRDKHPTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSA 208
V + +LA N L A RD HP + P S C F T N+ D D S
Sbjct: 693 VPDATLANGNSVRLHAARDFHP--INEIPKISKPSSRCSFGTENASDTKDKARRLQMPSG 750
Query: 209 PGLDV 213
P +D+
Sbjct: 751 PLIDI 755
>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
7526206-7526295,7526404-7526553,7527333-7528094,
7528177-7528496,7528581-7528707,7528792-7528959,
7529054-7530466,7530563-7530823,7530983-7531144,
7531976-7532121,7532601-7532667,7533483-7533587
Length = 1707
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 125 PRSIVKRIEAKVHEGDLRGAVRLLVSEDSLAPFNDETLSALRDKHP 170
P +I+ ++ + +L V L SE+S + F D LSAL+D HP
Sbjct: 1304 PSAILSPNDSLEQDHNLSRNVSSLSSEESTSGFYDSFLSALKDLHP 1349
>09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,
5748588-5748714,5748800-5749119,5749202-5749963,
5750749-5750898,5751007-5751096,5751196-5751340,
5751440-5751617,5751753-5752448,5752555-5752753
Length = 1524
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 125 PRSIVKRIEAKVHEGDLRGAVRLLVSEDSLAPFNDETLSALRDKHP 170
P +I+ ++ + +L V L SE+S + F D LSAL+D HP
Sbjct: 1201 PSAILSPNDSLEQDHNLSRNVSSLSSEESTSGFYDSFLSALKDLHP 1246
>06_01_0440 + 3127197-3127700,3128299-3128670
Length = 291
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 91 LRIPDRGDPRSLTAKVKENANNNSPYFLEDFKHKPRSIVKRIEAKVHEGDLRGAVRLLVS 150
LR DRGD +T +V ++ N+P+ +E P + R+ V G + A+R + +
Sbjct: 125 LRAIDRGDGNGVTVEVSDSRRPNTPWVVEAI--PPIESIPRLPHLVGIGHIARAIRFVRA 182
Query: 151 E 151
E
Sbjct: 183 E 183
>01_01_0762 +
5889925-5890136,5891110-5891273,5891755-5891878,
5891941-5892073,5892629-5892732,5892867-5895780,
5895876-5895965,5896251-5896355,5896633-5896740,
5896826-5896876
Length = 1334
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 170 PTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSG 206
P ++ S+PPAP+S+ F +++S D D SG
Sbjct: 489 PDAYQNSSMPPAPESAADFPSLSSADAPDISEPVLSG 525
>05_01_0120 - 828834-831143
Length = 769
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 146 RLLVSEDSLAPFNDETLSALRDKHPTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYS 205
R +S ++D L +RD P R L +S PFL+ +S +ISS YS
Sbjct: 463 RKFISRSLARVYSDSAL--IRDLDPRVDRVQHLAAEASTSPPFLSPSSLSSDSSISSKYS 520
Query: 206 GSAPGL 211
+P L
Sbjct: 521 SDSPSL 526
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 95 DRGDPRSLTAKVKENANNNSPYFLEDFKHKPRSIVKRIEAKVHEGDLRGAVRLLVSE 151
D DP+S V +P+ L SI+K++E K+H D+ G L VSE
Sbjct: 3951 DNSDPKSYPDSVTRLTRGKNPFAL--------SILKQVEHKLHGWDIDGTRSLKVSE 3999
>03_02_0787 +
11180794-11180958,11181051-11181230,11181396-11181611,
11181693-11181875,11182013-11182234,11182434-11182550,
11182682-11182825,11183198-11183299,11183762-11183830,
11184283-11184516
Length = 543
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 137 HEGDLRGAVRLLVSEDSLAPFNDETLSALRDKHPTPFRPLSLPPAPDSSCPFLTVNSEDV 196
++ LRG ++ V+E L+ D+T L + T R + P P +T
Sbjct: 432 YKATLRGINKVQVNESRLSEDLDQTWEVLAEPIQTVMRRYGI-PEPYEKLKEMTRGQAVT 490
Query: 197 ADAISSFYSGSAPGLDVPQGQHALIVRV-PHAFL 229
D+I F LD+P+ + ++++ PH+++
Sbjct: 491 KDSIRQFIE----DLDLPEAARSSLLKLTPHSYI 520
>01_07_0112 - 41149461-41151674,41151688-41153265,41154344-41155507,
41155807-41156293,41156603-41156759,41157303-41157378
Length = 1891
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 47 PVLKHIPKGARNLVAGKLRVIVDGCINNNGVEDWVSLL 84
P L +P+ +NL A +R+++DGC + +W+ +L
Sbjct: 1667 PKLTFLPESMKNLTA-LIRLLLDGCKGLEILPEWLGML 1703
>08_02_0748 -
20754293-20755136,20755686-20755927,20756012-20756241,
20756324-20756612
Length = 534
Score = 28.3 bits (60), Expect = 5.7
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 132 IEAKVHEGDLRGAVRLLVSEDSL-APFNDETLSALRDKHPTPFRPLSLPP 180
+EAKV L + R +S++ AP N TL R +H P R L LPP
Sbjct: 485 VEAKVALAMLLSSFRFAISDEYRHAPVNVLTL---RPRHGVPVRLLPLPP 531
>01_06_1823 -
40140405-40140965,40141305-40141803,40143830-40143960
Length = 396
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 11 FVVPRGLNVHISHDAHPQAQSVIHTLDDLASYKNKIPVLKHIPK 54
F PR ++V ++H PQ + +LDD A N + LK + K
Sbjct: 51 FAPPREVHVQVTHSMPPQKIEIFKSLDDWAR-DNILSHLKPVEK 93
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 170 PTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSAP 209
P P P PP P S PF TV + V ++ S +AP
Sbjct: 527 PIPMPPAPAPPIPTPSMPFPTVPAPPVTVPPATAPSMAAP 566
>06_01_0031 - 305457-305663,306248-306523,306824-307609
Length = 422
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 175 PLSLPPAPDSSCPFLTVNSEDVAD 198
P PPA S+CPF ++S AD
Sbjct: 27 PFLSPPAASSTCPFFALDSPFAAD 50
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 172 PFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSAPGLDVPQGQHALIVRVPHAFLWC 231
PF P PP SSCPFL S A + F++ +P P H + P + L
Sbjct: 14 PFFPF--PPPSSSSCPFL---SPPAASSTCPFFALDSPFAADPFHLHPFLPTPPTSSLLD 68
Query: 232 P 232
P
Sbjct: 69 P 69
>04_01_0349 - 4570071-4571267
Length = 398
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 167 DKHPTPFRPLSLPPAPDSSC--PFLTVNSE--DVADAISSFYSGSAPGLDVPQGQHALIV 222
D P+P RP+S P P C +L VN E V AI +F+ + P G HA++
Sbjct: 253 DATPSPARPVSSLPEPAQMCHRSYLEVNGELHLVGVAIRAFHG------EWPFGHHAVVY 306
Query: 223 R 223
+
Sbjct: 307 K 307
>01_03_0280 -
14546334-14546815,14546894-14547560,14550333-14551754,
14552831-14553127
Length = 955
Score = 27.9 bits (59), Expect = 7.5
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Query: 117 FLEDFK-HKPRSIVKR-IEAKVHEGDLRGAVRLLVSEDSLAPFNDETLSALRDKHPTPFR 174
F ED ++ R KR EAK+ + + R + L ++ +A DE ++A R P P
Sbjct: 455 FKEDIHTYRSRMRSKRDTEAKIADLEFRVSSYELNMQEEVARKVDERMAAHRSHDPQPTI 514
Query: 175 PLSL--PPAPDSSCPFLTVNSEDVADAISSFYSGSAPGLDVPQ 215
P ++ P SSC DA+ + + P D+ Q
Sbjct: 515 PPAMVSPSGNRSSCASTGQVGSQSMDAMQTQDESTCPVDDITQ 557
>09_02_0082 - 4060018-4061604
Length = 528
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 170 PTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSAP 209
P P P PP P S P TV + V A ++ S +AP
Sbjct: 418 PIPMPPAPAPPVPTPSMPSPTVPAPPVTAAPATAPSVAAP 457
>01_05_0724 -
24612712-24612852,24612985-24613038,24613340-24613429,
24613499-24613780,24613926-24614119,24614379-24614508,
24614610-24614690,24614766-24614891,24615019-24615076,
24615319-24615380,24615753-24615803,24615946-24616065,
24616280-24616403,24616832-24616920,24617304-24617396,
24617910-24618063,24618673-24619178
Length = 784
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 122 KHKPRSIVKRIEAKVHEGDLRGA---VRLLVSEDSLAPFNDETLSALRDKHPTPFRPLSL 178
K P ++KR E + H D RG +R L+ + +A + + S P + L
Sbjct: 167 KFSPEDVIKRFEQRSHAVDSRGVAEYLRALILTNGIADYLPDEQSGRSASLPALLQELKQ 226
Query: 179 PPAPDSSCPFL 189
+ + PF+
Sbjct: 227 RVSGNEDKPFM 237
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,376,704
Number of Sequences: 37544
Number of extensions: 319047
Number of successful extensions: 887
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 874
Number of HSP's gapped (non-prelim): 22
length of query: 234
length of database: 14,793,348
effective HSP length: 80
effective length of query: 154
effective length of database: 11,789,828
effective search space: 1815633512
effective search space used: 1815633512
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 58 (27.5 bits)
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