GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001193-TA|BGIBMGA001193-PA|undefined
         (234 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    27   0.36 
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   5.9  
AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative odorant-b...    23   7.7  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query: 187 PFLTVNSEDVADAISSFYSGSAPGLD 212
           P L VN++D+ +A     +G+APG D
Sbjct: 454 PVLVVNAQDIREATQYTRNGAAPGPD 479


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 187 PFLTVNSEDVADAISSFYSGSAPGLD-VPQGQHALIVR 223
           P   VN +++ D  SS     APGLD VP       +R
Sbjct: 415 PVRDVNEQELLDIASSLNPRKAPGLDGVPNAALTAAIR 452


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 170 PTPFRPLSLPPAPDSSCPFLTVNSEDVADAISSFYSGSA 208
           P P   L  P  P S        S  +A  +SS++S  A
Sbjct: 621 PPPGSALGHPSIPTSLAAAAAAYSHSIASTMSSYHSSMA 659


>AJ697726-1|CAG26919.1|  198|Anopheles gambiae putative
           odorant-binding protein OBPjj16 protein.
          Length = 198

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)

Query: 177 SLPPAPDSSC 186
           S PPAPD+SC
Sbjct: 17  SQPPAPDASC 26


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.136    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,047
Number of Sequences: 2123
Number of extensions: 10651
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 4
length of query: 234
length of database: 516,269
effective HSP length: 62
effective length of query: 172
effective length of database: 384,643
effective search space: 66158596
effective search space used: 66158596
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)