Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001192-TA|BGIBMGA001192-PA|undefined
(163 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q170L7 Cluster: Translation initiation factor-3 (IF3), ... 101 8e-21
UniRef50_UPI0000D55E9D Cluster: PREDICTED: similar to RIKEN cDNA... 86 3e-16
UniRef50_UPI00015B56DB Cluster: PREDICTED: similar to ENSANGP000... 73 3e-12
UniRef50_Q4V619 Cluster: IP07950p; n=4; Sophophora|Rep: IP07950p... 58 7e-08
UniRef50_UPI000155BBB6 Cluster: PREDICTED: similar to DC38; n=1;... 41 0.016
UniRef50_UPI0000ECD6E1 Cluster: Translation initiation factor IF... 40 0.027
UniRef50_UPI00006605CF Cluster: Translation initiation factor IF... 35 0.77
UniRef50_Q8FTQ2 Cluster: Translation initiation factor IF-3; n=4... 34 1.3
UniRef50_Q8F0K4 Cluster: Flagellar basal-body rod protein; n=2; ... 33 2.4
UniRef50_A2BEV1 Cluster: Novel protein; n=1; Danio rerio|Rep: No... 33 3.1
UniRef50_Q8XNA5 Cluster: Putative uncharacterized protein CPE043... 33 4.1
UniRef50_A7TK94 Cluster: Putative uncharacterized protein; n=1; ... 32 5.4
UniRef50_Q81L15 Cluster: Translation initiation factor IF-3; n=1... 32 5.4
UniRef50_A0E973 Cluster: Chromosome undetermined scaffold_84, wh... 32 7.2
UniRef50_Q0VFN0 Cluster: Putative uncharacterized protein MGC145... 31 9.5
UniRef50_Q2LR21 Cluster: Translation initiation factor 3; n=1; S... 31 9.5
UniRef50_A5IJB5 Cluster: Flagellar hook-length control protein; ... 31 9.5
UniRef50_Q8I403 Cluster: Putative uncharacterized protein PFE050... 31 9.5
UniRef50_Q8R5Y3 Cluster: Translation initiation factor IF-3; n=3... 31 9.5
>UniRef50_Q170L7 Cluster: Translation initiation factor-3 (IF3),
putative; n=2; Culicidae|Rep: Translation initiation
factor-3 (IF3), putative - Aedes aegypti (Yellowfever
mosquito)
Length = 268
Score = 101 bits (242), Expect = 8e-21
Identities = 51/137 (37%), Positives = 85/137 (62%), Gaps = 4/137 (2%)
Query: 25 AEGKNVP---KRKNFENRITLIGTDNSVSIIDLKNAQNLSVKREXXXXXXXXXXXXTRRP 81
AEG N P K+ +ITL+G D+SVSI++L AQ +S +R+ T+RP
Sbjct: 56 AEG-NAPAGTKKPKTAPKITLVGPDHSVSIMNLDEAQKISKRRDLKLVKVVDLDLKTQRP 114
Query: 82 IYKLMTNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEK 141
+YKLMT+AE+ +Q +++KG KL+ +S++I+EHDL++ + + K + K
Sbjct: 115 VYKLMTSAEYLEEDLKRREEKKRNKQEAAIKGDKLLTVSARITEHDLLSKIHNVQKWLNK 174
Query: 142 QYEVKVVLAGEGGQSSQ 158
QYEV+V+++G+G ++ Q
Sbjct: 175 QYEVRVIVSGDGDKAKQ 191
>UniRef50_UPI0000D55E9D Cluster: PREDICTED: similar to RIKEN cDNA
2810012L14; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to RIKEN cDNA 2810012L14 - Tribolium castaneum
Length = 221
Score = 86.2 bits (204), Expect = 3e-16
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 2/128 (1%)
Query: 27 GKNVPKRKNFENRITLIGTDNSVSIIDLKNAQNLSVKREXXXXXXXXXXXXTRRPIYKLM 86
GK K+ N +ITL+ DN VSI L+ A+ LS +R+ T+RP+Y+LM
Sbjct: 46 GKLQIKKTNIVPKITLVSGDN-VSITTLQEAEKLSKRRDLKLVKIVDVDAKTQRPVYQLM 104
Query: 87 TNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVK 146
T E+H RQ + +KG+K+++L+ +I++HDL ++K K + K YEV+
Sbjct: 105 TGEEYHAEDLKQREKRKEERQKN-IKGEKVLLLNCRITQHDLTIQLKKALKWLHKMYEVR 163
Query: 147 VVLAGEGG 154
VV++G G
Sbjct: 164 VVISGAHG 171
>UniRef50_UPI00015B56DB Cluster: PREDICTED: similar to
ENSANGP00000020034; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000020034 - Nasonia
vitripennis
Length = 179
Score = 72.9 bits (171), Expect = 3e-12
Identities = 36/149 (24%), Positives = 82/149 (55%), Gaps = 3/149 (2%)
Query: 15 EYRPVTTIINAEGKNVPKRKN--FENRITLIGTDNSVSIIDLKNAQNLSVKREXXXXXXX 72
+++PV N PK++ ++TLI ++ +S++ L+ A+ L+ +R+
Sbjct: 30 KFKPVNKSNNPNAPEKPKKRKPLTSPQVTLISPEDDISMMTLEQAKKLADRRKLKLVKIL 89
Query: 73 XXXXXTRRPIYKLMTNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSV 132
+++P++KLMT+ EF ++++VK KL +S+K +EHDL +
Sbjct: 90 DFDTKSQKPLFKLMTSQEF-FEEGVKFKERKKKEKDAAVKEDKLFTISTKTTEHDLYIKI 148
Query: 133 RKMGKLVEKQYEVKVVLAGEGGQSSQVLV 161
++ KL++K++E+++ ++ +G + V++
Sbjct: 149 NQIMKLLKKKHEIRIFISKDGNHTKAVIL 177
>UniRef50_Q4V619 Cluster: IP07950p; n=4; Sophophora|Rep: IP07950p -
Drosophila melanogaster (Fruit fly)
Length = 232
Score = 58.4 bits (135), Expect = 7e-08
Identities = 32/120 (26%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
Query: 39 RITLIGTDNSVSIIDLKNAQNLSVKREXXXXXXXXXXXXTRRPIYKLMTNAEFHXXXXXX 98
+ITLI + S+SI L+ AQ L+ +R+ T R ++KL+T AE
Sbjct: 58 KITLIQQNQSISITTLEEAQKLAKRRDLHLLRLEQTDAKTGRAMFKLVTAAEM--LSDDA 115
Query: 99 XXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVKVVLAGEGGQSSQ 158
+ + K +K + + ++I+EHDL + ++ + K + K++EV++++ G S +
Sbjct: 116 EQSRSASEKVKDKKTEKSLTIGARITEHDLSSRLKNIVKWLGKRHEVRILIQGNASGSDE 175
>UniRef50_UPI000155BBB6 Cluster: PREDICTED: similar to DC38; n=1;
Ornithorhynchus anatinus|Rep: PREDICTED: similar to DC38
- Ornithorhynchus anatinus
Length = 415
Score = 40.7 bits (91), Expect = 0.016
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 78 TRRPIYKLMTNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGK 137
T P+Y+L+T ++ H Q + ++L SS I++HDL T +++ +
Sbjct: 257 TEPPLYQLLTGSQIHEERLRLREKSKAKSQTGPTQLKELTF-SSSITQHDLHTKTKQIQE 315
Query: 138 LVEKQYEVKVVL 149
+EK+++V++ +
Sbjct: 316 WIEKKHQVRITI 327
>UniRef50_UPI0000ECD6E1 Cluster: Translation initiation factor IF-3,
mitochondrial precursor (IF-3Mt) (IF3(mt)) (IF-3(Mt))
(IF3mt).; n=2; Gallus gallus|Rep: Translation initiation
factor IF-3, mitochondrial precursor (IF-3Mt) (IF3(mt))
(IF-3(Mt)) (IF3mt). - Gallus gallus
Length = 205
Score = 39.9 bits (89), Expect = 0.027
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 81 PIYKLMTNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVE 140
P+Y+LMT + H + + + ++L SS I+++DL T ++++ +E
Sbjct: 57 PVYRLMTGQQIHEEKLKRAEKEKASSKTGTTTVKELSF-SSAIAKNDLETKIKQITHWIE 115
Query: 141 KQYEVKVVL 149
K+Y VKV +
Sbjct: 116 KKYHVKVTI 124
>UniRef50_UPI00006605CF Cluster: Translation initiation factor IF-3,
mitochondrial precursor (IF-3Mt) (IF3(mt)) (IF-3(Mt))
(IF3mt).; n=1; Takifugu rubripes|Rep: Translation
initiation factor IF-3, mitochondrial precursor (IF-3Mt)
(IF3(mt)) (IF-3(Mt)) (IF3mt). - Takifugu rubripes
Length = 266
Score = 35.1 bits (77), Expect = 0.77
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 81 PIYKLMTNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVE 140
P+YKLMT + H + VK + + I+ HDL V+++ +E
Sbjct: 112 PLYKLMTGKQIHDEQLKRREKQKSKAAPAQVKE---LTFTHGIAAHDLTVKVKQIESWLE 168
Query: 141 KQYEVKVVLAGEGGQSSQVL 160
K ++V L + GQ + L
Sbjct: 169 KNNHIRVTLRAKRGQPADNL 188
>UniRef50_Q8FTQ2 Cluster: Translation initiation factor IF-3; n=46;
Bacteria|Rep: Translation initiation factor IF-3 -
Corynebacterium efficiens
Length = 203
Score = 34.3 bits (75), Expect = 1.3
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 40 ITLIGTDNS-VSIIDLKNAQNLSVKREXXXXXXXXXXXXTRRPIYKLMTNAEFHXXXXXX 98
+ L+G + V I+ +++A+ L+ + + P+ K+M +F
Sbjct: 46 VRLVGPNGEQVGIVRIEDARKLAFDADLDLVEVAPTA---KPPVCKIMDYGKFKYEAAQK 102
Query: 99 XXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVKVVLAGEGGQSSQ 158
+Q + VK QKL KI +HD T + + +EK +VKV + G + ++
Sbjct: 103 ARESRKNQQQTVVKEQKLR---PKIDDHDYETKKSNVIRFLEKGSKVKVTIMFRGREQAR 159
>UniRef50_Q8F0K4 Cluster: Flagellar basal-body rod protein; n=2;
Leptospira interrogans|Rep: Flagellar basal-body rod
protein - Leptospira interrogans
Length = 276
Score = 33.5 bits (73), Expect = 2.4
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 7 LFNLKKILE-YRPVTTIINAEGKNVPKRKNFENRITLIGTDNSVSIIDL 54
L+NLK + Y +T++IN E R++F+N I L+ N VS +L
Sbjct: 217 LYNLKSNISLYNSLTSLINKENNTSIPRESFDNYIKLLNYFNEVSFSNL 265
>UniRef50_A2BEV1 Cluster: Novel protein; n=1; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 280
Score = 33.1 bits (72), Expect = 3.1
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 81 PIYKLMTNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVE 140
P+YKLM E H + V K + SS IS HDL +R++ +E
Sbjct: 131 PVYKLMKGKEIHEEQLKLREKQ---KDKKGVVQSKELNFSSDISLHDLDNKLRQIVSWLE 187
Query: 141 KQYEVKVVL-AGEGGQS 156
K VK+ + AG ++
Sbjct: 188 KNNHVKLTIRAGTNSET 204
>UniRef50_Q8XNA5 Cluster: Putative uncharacterized protein CPE0433;
n=2; Clostridium perfringens|Rep: Putative
uncharacterized protein CPE0433 - Clostridium
perfringens
Length = 431
Score = 32.7 bits (71), Expect = 4.1
Identities = 12/39 (30%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 22 IINAEGKNVPKRKNFENRITLIG-TDNSVSIIDLKNAQN 59
II+ +GK V + NFEN++++ G +D+ ++++D+ + ++
Sbjct: 307 IIDKDGKEVETKINFENKVSINGFSDSGLAVVDILDGES 345
>UniRef50_A7TK94 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 636
Score = 32.3 bits (70), Expect = 5.4
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 7 LFNLKKILEYR-PVTTIINAEGKNVPKRKNFENRITLIGTDNSVSIIDLKNAQNLS 61
L N KKIL+ + P TT IN + +NV + + +G +N+ + + N QNL+
Sbjct: 38 LLNFKKILDLKKPKTTSINRDHENVASSNSKNSNTNHLGENNASTNGNNLNLQNLN 93
>UniRef50_Q81L15 Cluster: Translation initiation factor IF-3; n=143;
Bacteria|Rep: Translation initiation factor IF-3 -
Bacillus anthracis
Length = 167
Score = 32.3 bits (70), Expect = 5.4
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 106 RQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVKVVLAGEG 153
R+N V K + LS I EHD T +R K +EK +VK + +G
Sbjct: 73 RKNQKVISMKEVRLSPTIDEHDFNTKLRNAIKFLEKGDKVKASIRFKG 120
>UniRef50_A0E973 Cluster: Chromosome undetermined scaffold_84, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined scaffold_84, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2599
Score = 31.9 bits (69), Expect = 7.2
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 5 AVLFNLKKILEYRPVTTIINAEGKN--VPKRKNFENRITLIGTDNSVSIIDLKNAQNLSV 62
+VL + ++ Y +TT I+ + + + F N + T NSVS+++L + QN+ V
Sbjct: 1545 SVLLSNYPVISYESITTSISQQNELFLIKNSSFFSNILVYDSTRNSVSLLELISEQNIVV 1604
Query: 63 KRE 65
+ E
Sbjct: 1605 RFE 1607
>UniRef50_Q0VFN0 Cluster: Putative uncharacterized protein
MGC145704; n=1; Xenopus tropicalis|Rep: Putative
uncharacterized protein MGC145704 - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 258
Score = 31.5 bits (68), Expect = 9.5
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 81 PIYKLMTNAEFHXXXXXXXXXXXXARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVE 140
PIYKL+T + H + + V+ ++L S+ I++HDL +++ +E
Sbjct: 111 PIYKLLTGKQIHEEQLKIREKQKLSSGHGPVQIKELSF-SACIAKHDLDIKTKQIIHWIE 169
Query: 141 KQYEVKV 147
K++ V++
Sbjct: 170 KKHHVRI 176
>UniRef50_Q2LR21 Cluster: Translation initiation factor 3; n=1;
Syntrophus aciditrophicus SB|Rep: Translation initiation
factor 3 - Syntrophus aciditrophicus (strain SB)
Length = 181
Score = 31.5 bits (68), Expect = 9.5
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 105 ARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVKVVLAGEG 153
AR++ S K + L K+ EHDL ++ + K +E+ +VKV + G
Sbjct: 88 ARKSQSTIQVKEIRLRPKVEEHDLQVKIKHIRKFLEQHDKVKVSVLFRG 136
>UniRef50_A5IJB5 Cluster: Flagellar hook-length control protein;
n=2; Thermotoga|Rep: Flagellar hook-length control
protein - Thermotoga petrophila RKU-1
Length = 658
Score = 31.5 bits (68), Expect = 9.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 105 ARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVKVVLAGE 152
A + +K + +L S+ S DLM S+ + GK+++ YE K +AG+
Sbjct: 5 AEEKGELKKKSAAVLFSQ-SVKDLMKSLGRKGKMIDSTYEKKKEIAGK 51
>UniRef50_Q8I403 Cluster: Putative uncharacterized protein PFE0500c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0500c - Plasmodium falciparum
(isolate 3D7)
Length = 2535
Score = 31.5 bits (68), Expect = 9.5
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 1 MNKYAVLFNLKKILEYRPVTTIINAEGKNVPKRKNFENRITLIGTDNSVSIIDLKNAQN 59
+NK + +FN+ KI T IINA NV K + N TL NS +++ K+ N
Sbjct: 1233 INK-STIFNMPKIRNDNNATNIINAYYNNVKKEEEVTNTSTL----NSSNVLKFKHDHN 1286
>UniRef50_Q8R5Y3 Cluster: Translation initiation factor IF-3; n=3;
Fusobacterium nucleatum|Rep: Translation initiation
factor IF-3 - Fusobacterium nucleatum subsp. nucleatum
Length = 188
Score = 31.5 bits (68), Expect = 9.5
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 105 ARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVKVVL 149
A++N K + ++++I HDL T + ++ K +EK+ +VKV L
Sbjct: 95 AKKNQKQVVIKEIKVTARIDSHDLETKLNQVTKFLEKENKVKVTL 139
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.315 0.130 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,169,966
Number of Sequences: 1657284
Number of extensions: 3734210
Number of successful extensions: 9840
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 9824
Number of HSP's gapped (non-prelim): 19
length of query: 163
length of database: 575,637,011
effective HSP length: 95
effective length of query: 68
effective length of database: 418,195,031
effective search space: 28437262108
effective search space used: 28437262108
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 68 (31.5 bits)
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